RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 INTS10Q9NVR2 710 aaKnown RBP16.2■□□□□ 0.18
LTBR-201ENST00000228918 GID8Q9NWU2 228 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 MARCH2Q9P0N8 246 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 AURKCQ9UQB9 309 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 MED16Q9Y2X0 877 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 SQORQ9Y6N5 450 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 DLGAP1O14490 977 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 DSC1Q08554 894 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 SETMARQ53H47 684 aaPredicted RBP16.2■□□□□ 0.18
LTBR-201ENST00000228918 ALG1LQ6GMV1 187 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 FBXO39Q8N4B4 442 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 FAM47BQ8NA70 645 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 STAG3L4Q8TBR4 150 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 FBXO32Q969P5 355 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 CDKN2AIPNLQ96HQ2 116 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 SLC45A3Q96JT2 553 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 TRIB3Q96RU7 358 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 SYTL2Q9HCH5 934 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 OLA1Q9NTK5 396 aaKnown RBP16.2■□□□□ 0.18
LTBR-201ENST00000228918 RSL24D1Q9UHA3 163 aaKnown RBP16.2■□□□□ 0.18
LTBR-201ENST00000228918 IKZF3Q9UKT9 509 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 RNF112Q9ULX5 631 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 PCDHB5Q9Y5E4 795 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 GREB1Q4ZG55 1949 aa16.19■□□□□ 0.18
LTBR-201ENST00000228918 SLC12A8A0AV02 714 aa16.19■□□□□ 0.18
LTBR-201ENST00000228918 TMEM189-UBE2V1I3L0A0 370 aa16.19■□□□□ 0.18
LTBR-201ENST00000228918 ARPC2O15144 300 aa16.19■□□□□ 0.18
LTBR-201ENST00000228918 VPS4BO75351 444 aa16.19■□□□□ 0.18
LTBR-201ENST00000228918 RHOBTB1O94844 696 aa16.19■□□□□ 0.18
LTBR-201ENST00000228918 RPS17P08708 135 aaKnown RBP16.19■□□□□ 0.18
LTBR-201ENST00000228918 PRR35P0CG20 571 aa16.19■□□□□ 0.18
LTBR-201ENST00000228918 UGT1A6P19224 532 aa16.19■□□□□ 0.18
LTBR-201ENST00000228918 PSMA4P25789 261 aaKnown RBP16.19■□□□□ 0.18
LTBR-201ENST00000228918 MAGEA11P43364 429 aa16.19■□□□□ 0.18
LTBR-201ENST00000228918 C10orf120Q5SQS8 335 aa16.19■□□□□ 0.18
LTBR-201ENST00000228918 OGFOD2Q6N063 350 aa16.19■□□□□ 0.18
LTBR-201ENST00000228918 PAQR3Q6TCH7 311 aa16.19■□□□□ 0.18
LTBR-201ENST00000228918 CBR4Q8N4T8 237 aa16.19■□□□□ 0.18
LTBR-201ENST00000228918 TMIGD2Q96BF3 282 aa16.19■□□□□ 0.18
LTBR-201ENST00000228918 CLK4Q9HAZ1 481 aaKnown RBP16.19■□□□□ 0.18
LTBR-201ENST00000228918 SPC25Q9HBM1 224 aa16.19■□□□□ 0.18
LTBR-201ENST00000228918 TIMMDC1Q9NPL8 285 aa16.19■□□□□ 0.18
LTBR-201ENST00000228918 SEMA4BQ9NPR2 832 aaPredicted RBP16.19■□□□□ 0.18
LTBR-201ENST00000228918 ZNF510Q9Y2H8 683 aa16.19■□□□□ 0.18
LTBR-201ENST00000228918 PCDHA9Q9Y5H5 950 aa16.19■□□□□ 0.18
LTBR-201ENST00000228918 GPR45Q9Y5Y3 372 aa16.19■□□□□ 0.18
LTBR-201ENST00000228918 UBA6A0AVT1 1052 aaPredicted RBP16.19■□□□□ 0.18
LTBR-201ENST00000228918 LCHNA4D1U4 455 aa16.19■□□□□ 0.18
LTBR-201ENST00000228918 MOXD2PA6NHM9 499 aa16.19■□□□□ 0.18
LTBR-201ENST00000228918 ECI2O75521 394 aa16.19■□□□□ 0.18
LTBR-201ENST00000228918 TRMUO75648 421 aaKnown RBP16.19■□□□□ 0.18
LTBR-201ENST00000228918 NDST3O95803 873 aa16.19■□□□□ 0.18
LTBR-201ENST00000228918 SERPINF2P08697 491 aa16.19■□□□□ 0.18
LTBR-201ENST00000228918 IL10P22301 178 aa16.19■□□□□ 0.18
LTBR-201ENST00000228918 OXTRP30559 389 aa16.19■□□□□ 0.18
LTBR-201ENST00000228918 ZNF140P52738 457 aaPredicted RBP16.19■□□□□ 0.18
LTBR-201ENST00000228918 DIO3P55073 304 aa16.19■□□□□ 0.18
LTBR-201ENST00000228918 PLOD1Q02809 727 aaPredicted RBP16.19■□□□□ 0.18
LTBR-201ENST00000228918 RPS6KA2Q15349 733 aa16.19■□□□□ 0.18
LTBR-201ENST00000228918 SPATS1Q496A3 300 aa16.19■□□□□ 0.18
LTBR-201ENST00000228918 NADSYN1Q6IA69 706 aa16.19■□□□□ 0.18
LTBR-201ENST00000228918 CAMK1DQ8IU85 385 aa16.19■□□□□ 0.18
LTBR-201ENST00000228918 ADGRG5Q8IZF4 528 aa16.19■□□□□ 0.18
LTBR-201ENST00000228918 DIS3LQ8TF46 1054 aaKnown RBP16.19■□□□□ 0.18
LTBR-201ENST00000228918 MYRFLQ96LU7 910 aa16.19■□□□□ 0.18
LTBR-201ENST00000228918 TRIM54Q9BYV2 358 aa16.19■□□□□ 0.18
LTBR-201ENST00000228918 NLE1Q9NVX2 485 aaPredicted RBP16.19■□□□□ 0.18
LTBR-201ENST00000228918 SMOXQ9NWM0 555 aa16.19■□□□□ 0.18
LTBR-201ENST00000228918 SLC8A2Q9UPR5 921 aa16.19■□□□□ 0.18
LTBR-201ENST00000228918 FAM50BQ9Y247 325 aa16.19■□□□□ 0.18
LTBR-201ENST00000228918 CEP350Q5VT06 3117 aa16.18■□□□□ 0.18
LTBR-201ENST00000228918 MRPL19P49406 292 aaKnown RBP16.18■□□□□ 0.18
LTBR-201ENST00000228918 CDK9P50750 372 aaKnown RBP16.18■□□□□ 0.18
LTBR-201ENST00000228918 ECT2LQ008S8 904 aa16.18■□□□□ 0.18
LTBR-201ENST00000228918 KCTD21Q4G0X4 260 aa16.18■□□□□ 0.18
LTBR-201ENST00000228918 ACBD5Q5T8D3 534 aaPredicted RBP16.18■□□□□ 0.18
LTBR-201ENST00000228918 ANKS6Q68DC2 871 aa16.18■□□□□ 0.18
LTBR-201ENST00000228918 GLB1LQ6UWU2 654 aa16.18■□□□□ 0.18
LTBR-201ENST00000228918 ATAD1Q8NBU5 361 aa16.18■□□□□ 0.18
LTBR-201ENST00000228918 TSPEARQ8WU66 669 aa16.18■□□□□ 0.18
LTBR-201ENST00000228918 TMEM125Q96AQ2 219 aa16.18■□□□□ 0.18
LTBR-201ENST00000228918 TAS2R13Q9NYV9 303 aa16.18■□□□□ 0.18
LTBR-201ENST00000228918 SPO11Q9Y5K1 396 aa16.18■□□□□ 0.18
LTBR-201ENST00000228918 ZFC3H1O60293 1989 aaKnown RBP16.18■□□□□ 0.18
LTBR-201ENST00000228918 CROCCQ5TZA2 2017 aa16.18■□□□□ 0.18
LTBR-201ENST00000228918 A0A1W2PP18 115 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 FAM149AA5PLN7 773 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 ADAMTS4O75173 837 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 BMP10O95393 424 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 MYF6P23409 242 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 FASP25445 335 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 CTGFP29279 349 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 FMO4P31512 558 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 CCT8P50990 548 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 RCAN2Q14206 197 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 TSNQ15631 228 aaKnown RBP16.17■□□□□ 0.18
LTBR-201ENST00000228918 ATP6AP1Q15904 470 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 FBXO48Q5FWF7 155 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 CLLU1OSQ5K130 101 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 VARS2Q5ST30 1063 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms