RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 SLC22A17Q8WUG5 538 aa9.93□□□□□ -0.82
USP11-201ENST00000218348 NRG4Q8WWG1 115 aa9.93□□□□□ -0.82
USP11-201ENST00000218348 RCN3Q96D15 328 aa9.93□□□□□ -0.82
USP11-201ENST00000218348 CDKN2AIPNLQ96HQ2 116 aa9.93□□□□□ -0.82
USP11-201ENST00000218348 HIC2Q96JB3 615 aa9.93□□□□□ -0.82
USP11-201ENST00000218348 RAD9AQ99638 391 aa9.93□□□□□ -0.82
USP11-201ENST00000218348 TUBB6Q9BUF5 446 aa9.93□□□□□ -0.82
USP11-201ENST00000218348 CCDC167Q9P0B6 97 aa9.93□□□□□ -0.82
USP11-201ENST00000218348 FAM8A1Q9UBU6 413 aa9.93□□□□□ -0.82
USP11-201ENST00000218348 PPM1HQ9ULR3 514 aa9.93□□□□□ -0.82
USP11-201ENST00000218348 BTRCQ9Y297 605 aa9.93□□□□□ -0.82
USP11-201ENST00000218348 DENND4AQ7Z401 1863 aa9.93□□□□□ -0.82
USP11-201ENST00000218348 NOTCH4Q99466 2003 aa9.93□□□□□ -0.82
USP11-201ENST00000218348 A0A1W2PRU2 124 aa9.93□□□□□ -0.82
USP11-201ENST00000218348 H3BMM5 538 aa9.93□□□□□ -0.82
USP11-201ENST00000218348 MATN2O00339 956 aa9.93□□□□□ -0.82
USP11-201ENST00000218348 TEX28O15482 410 aa9.93□□□□□ -0.82
USP11-201ENST00000218348 SMAD6O43541 496 aaKnown RBP9.93□□□□□ -0.82
USP11-201ENST00000218348 NIPSNAP2O75323 286 aa9.93□□□□□ -0.82
USP11-201ENST00000218348 NDUFS3O75489 264 aa9.93□□□□□ -0.82
USP11-201ENST00000218348 SRP72O76094 671 aaKnown RBP9.93□□□□□ -0.82
USP11-201ENST00000218348 URODP06132 367 aa9.93□□□□□ -0.82
USP11-201ENST00000218348 POU4F1Q01851 419 aa9.93□□□□□ -0.82
USP11-201ENST00000218348 SLC8B1Q6J4K2 584 aa9.93□□□□□ -0.82
USP11-201ENST00000218348 PSAPL1Q6NUJ1 521 aa9.93□□□□□ -0.82
USP11-201ENST00000218348 APCDD1Q8J025 514 aa9.93□□□□□ -0.82
USP11-201ENST00000218348 BBS5Q8N3I7 341 aa9.93□□□□□ -0.82
USP11-201ENST00000218348 ZNF558Q96NG5 402 aa9.93□□□□□ -0.82
USP11-201ENST00000218348 SLC30A3Q99726 388 aa9.93□□□□□ -0.82
USP11-201ENST00000218348 PRKAG2Q9UGJ0 569 aa9.93□□□□□ -0.82
USP11-201ENST00000218348 EVLQ9UI08 416 aaPredicted RBP9.93□□□□□ -0.82
USP11-201ENST00000218348 CDYLQ9Y232 598 aa9.93□□□□□ -0.82
USP11-201ENST00000218348 AK5Q9Y6K8 562 aa9.93□□□□□ -0.82
USP11-201ENST00000218348 CHRM3P20309 590 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 PIK3R1P27986 724 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 CSKP41240 450 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 RHOAP61586 193 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 TBL3Q12788 808 aaKnown RBP9.92□□□□□ -0.82
USP11-201ENST00000218348 MSLNQ13421 630 aaPredicted RBP9.92□□□□□ -0.82
USP11-201ENST00000218348 CYTH1Q15438 398 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 ADGRF1Q5T601 910 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 ACAD11Q709F0 780 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 ZNF554Q86TJ5 538 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 PTGR2Q8N8N7 351 aaPredicted RBP9.92□□□□□ -0.82
USP11-201ENST00000218348 CALML6Q8TD86 181 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 ISL2Q96A47 359 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 MRPL57Q9BQC6 102 aaKnown RBP9.92□□□□□ -0.82
USP11-201ENST00000218348 SEMA4BQ9NPR2 832 aaPredicted RBP9.92□□□□□ -0.82
USP11-201ENST00000218348 ANKRD6Q9Y2G4 727 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 A0A088AWK7 358 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 A0A1B0GTL3 188 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 LOC285095A0A1B0GVY8 99 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 SUPT3HB4E1H0 165 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 H3BNC9 293 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 NDST3O95803 873 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 IL1BP01584 269 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 ZDHHC11BP0C7U3 371 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 ATP5F1P24539 256 aaPredicted RBP9.92□□□□□ -0.82
USP11-201ENST00000218348 HTR7P34969 479 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 YBEYP58557 167 aaPredicted RBP9.92□□□□□ -0.82
USP11-201ENST00000218348 ARF5P84085 180 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 TRAF2Q12933 501 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 PRKAA1Q13131 559 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 OR4D1Q15615 310 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 POM121L1PQ3SYA9 428 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 C6orf163Q5TEZ5 329 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 LRRC49Q8IUZ0 686 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 CNTN4Q8IWV2 1026 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 DDIASQ8IXT1 998 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 TRPC4APQ8TEL6 797 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 GPR21Q99679 349 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 CCT7Q99832 543 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 TRIM8Q9BZR9 551 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 DCLRE1BQ9H816 532 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 POLR3BQ9NW08 1133 aaPredicted RBP9.92□□□□□ -0.82
USP11-201ENST00000218348 HCFC1R1Q9NWW0 138 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 DNAJC28Q9NX36 388 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 AFF4Q9UHB7 1163 aaKnown RBP9.92□□□□□ -0.82
USP11-201ENST00000218348 CARD8Q9Y2G2 431 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 INSL6Q9Y581 213 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 MROH6A6NGR9 719 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 TARM1B6A8C7 271 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 CDC7O00311 574 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 GPC4O75487 556 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 TM7SF2O76062 418 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 PENKP01210 267 aaPredicted RBP9.92□□□□□ -0.82
USP11-201ENST00000218348 ITGAXP20702 1163 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 MC4RP32245 332 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 CPOXP36551 454 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 LEPRP48357 1165 aaKnown RBP9.92□□□□□ -0.82
USP11-201ENST00000218348 MAPKAPK2P49137 400 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 CCR3P51677 355 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 CDH4P55283 916 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 NRG1Q02297 640 aaPredicted RBP9.92□□□□□ -0.82
USP11-201ENST00000218348 RING1Q06587 406 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 TSNQ15631 228 aaKnown RBP9.92□□□□□ -0.82
USP11-201ENST00000218348 TECRLQ5HYJ1 363 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 WASHC2DQ5SRD0 308 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 MRNIPQ6NTE8 343 aa9.92□□□□□ -0.82
USP11-201ENST00000218348 CUZD1Q86UP6 607 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms