RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 DDA1Q9BW61 102 aa15.75■□□□□ 0.11
ERCC1-201ENST00000013807 SARS2Q9NP81 518 aaKnown RBP15.75■□□□□ 0.11
ERCC1-201ENST00000013807 IFNKQ9P0W0 207 aa15.75■□□□□ 0.11
ERCC1-201ENST00000013807 NFKBIL1Q9UBC1 381 aaPredicted RBP15.75■□□□□ 0.11
ERCC1-201ENST00000013807 PCDHGA4Q9Y5G9 962 aa15.75■□□□□ 0.11
ERCC1-201ENST00000013807 A6NCN8 305 aa15.74■□□□□ 0.11
ERCC1-201ENST00000013807 C3orf70A6NLC5 250 aaPredicted RBP15.74■□□□□ 0.11
ERCC1-201ENST00000013807 GOLGA6L19H0YKK7 550 aa15.74■□□□□ 0.11
ERCC1-201ENST00000013807 MAP3K6O95382 1288 aa15.74■□□□□ 0.11
ERCC1-201ENST00000013807 TMEM253P0C7T8 217 aa15.74■□□□□ 0.11
ERCC1-201ENST00000013807 ARHGAP25P42331 645 aa15.74■□□□□ 0.11
ERCC1-201ENST00000013807 SRSF6Q13247 344 aaKnown RBP15.74■□□□□ 0.11
ERCC1-201ENST00000013807 SLC14A2Q15849 920 aa15.74■□□□□ 0.11
ERCC1-201ENST00000013807 SLC9A4Q6AI14 798 aa15.74■□□□□ 0.11
ERCC1-201ENST00000013807 IYDQ6PHW0 289 aa15.74■□□□□ 0.11
ERCC1-201ENST00000013807 DOK6Q6PKX4 331 aa15.74■□□□□ 0.11
ERCC1-201ENST00000013807 ARHGAP22Q7Z5H3 698 aa15.74■□□□□ 0.11
ERCC1-201ENST00000013807 TRIM74Q86UV6 250 aa15.74■□□□□ 0.11
ERCC1-201ENST00000013807 PLD5Q8N7P1 536 aa15.74■□□□□ 0.11
ERCC1-201ENST00000013807 BMPERQ8N8U9 685 aa15.74■□□□□ 0.11
ERCC1-201ENST00000013807 RCBTB1Q8NDN9 531 aa15.74■□□□□ 0.11
ERCC1-201ENST00000013807 OR8K1Q8NGG5 319 aa15.74■□□□□ 0.11
ERCC1-201ENST00000013807 SLC37A2Q8TED4 501 aa15.74■□□□□ 0.11
ERCC1-201ENST00000013807 RAPGEF5Q92565 580 aa15.74■□□□□ 0.11
ERCC1-201ENST00000013807 TADA1Q96BN2 335 aa15.74■□□□□ 0.11
ERCC1-201ENST00000013807 EID2BQ96D98 161 aa15.74■□□□□ 0.11
ERCC1-201ENST00000013807 MLPHQ9BV36 600 aaPredicted RBP15.74■□□□□ 0.11
ERCC1-201ENST00000013807 PACSIN1Q9BY11 444 aa15.74■□□□□ 0.11
ERCC1-201ENST00000013807 ADGRE3Q9BY15 652 aa15.74■□□□□ 0.11
ERCC1-201ENST00000013807 ASPSCR1Q9BZE9 553 aa15.74■□□□□ 0.11
ERCC1-201ENST00000013807 SPRY4Q9C004 299 aa15.74■□□□□ 0.11
ERCC1-201ENST00000013807 FAM83DQ9H4H8 585 aa15.74■□□□□ 0.11
ERCC1-201ENST00000013807 SUDS3Q9H7L9 328 aaPredicted RBP15.74■□□□□ 0.11
ERCC1-201ENST00000013807 KCNK4Q9NYG8 393 aa15.74■□□□□ 0.11
ERCC1-201ENST00000013807 PCYT1BQ9Y5K3 369 aaPredicted RBP15.74■□□□□ 0.11
ERCC1-201ENST00000013807 OAS3Q9Y6K5 1087 aaKnown RBP15.74■□□□□ 0.11
ERCC1-201ENST00000013807 ZNF106Q9H2Y7 1883 aaKnown RBP15.74■□□□□ 0.11
ERCC1-201ENST00000013807 C1orf232A0A0U1RR37 186 aa15.73■□□□□ 0.11
ERCC1-201ENST00000013807 FADS2P1A8MWK0 482 aa15.73■□□□□ 0.11
ERCC1-201ENST00000013807 GPR89AB7ZAQ6 455 aa15.73■□□□□ 0.11
ERCC1-201ENST00000013807 NUAK1O60285 661 aa15.73■□□□□ 0.11
ERCC1-201ENST00000013807 MTA2O94776 668 aa15.73■□□□□ 0.11
ERCC1-201ENST00000013807 EML2O95834 649 aa15.73■□□□□ 0.11
ERCC1-201ENST00000013807 JCHAINP01591 159 aa15.73■□□□□ 0.11
ERCC1-201ENST00000013807 GPR89BP0CG08 455 aa15.73■□□□□ 0.11
ERCC1-201ENST00000013807 SFTPCP11686 197 aa15.73■□□□□ 0.11
ERCC1-201ENST00000013807 BIRC2Q13490 618 aa15.73■□□□□ 0.11
ERCC1-201ENST00000013807 LRRC38Q5VT99 294 aa15.73■□□□□ 0.11
ERCC1-201ENST00000013807 NKAIN2Q5VXU1 208 aa15.73■□□□□ 0.11
ERCC1-201ENST00000013807 LYSMD3Q7Z3D4 306 aa15.73■□□□□ 0.11
ERCC1-201ENST00000013807 ZSCAN1Q8NBB4 408 aa15.73■□□□□ 0.11
ERCC1-201ENST00000013807 CCDC112Q8NEF3 446 aa15.73■□□□□ 0.11
ERCC1-201ENST00000013807 LPCAT1Q8NF37 534 aa15.73■□□□□ 0.11
ERCC1-201ENST00000013807 CCHCR1Q8TD31 782 aa15.73■□□□□ 0.11
ERCC1-201ENST00000013807 NKD1Q969G9 470 aa15.73■□□□□ 0.11
ERCC1-201ENST00000013807 IMP4Q96G21 291 aaKnown RBP15.73■□□□□ 0.11
ERCC1-201ENST00000013807 TRIB3Q96RU7 358 aa15.73■□□□□ 0.11
ERCC1-201ENST00000013807 HERPUD2Q9BSE4 406 aa15.73■□□□□ 0.11
ERCC1-201ENST00000013807 CARD9Q9H257 536 aa15.73■□□□□ 0.11
ERCC1-201ENST00000013807 MAGEE1Q9HCI5 957 aa15.73■□□□□ 0.11
ERCC1-201ENST00000013807 STARD5Q9NSY2 213 aa15.73■□□□□ 0.11
ERCC1-201ENST00000013807 PKD2L2Q9NZM6 624 aa15.73■□□□□ 0.11
ERCC1-201ENST00000013807 TBC1D29Q9UFV1 150 aa15.73■□□□□ 0.11
ERCC1-201ENST00000013807 ADGRG1Q9Y653 693 aa15.73■□□□□ 0.11
ERCC1-201ENST00000013807 UBR5O95071 2799 aaPredicted RBP15.73■□□□□ 0.11
ERCC1-201ENST00000013807 BSNQ9UPA5 3926 aa15.72■□□□□ 0.11
ERCC1-201ENST00000013807 OR5K4A6NMS3 321 aa15.72■□□□□ 0.11
ERCC1-201ENST00000013807 KCNK1O00180 336 aa15.72■□□□□ 0.11
ERCC1-201ENST00000013807 INPP4BO15327 924 aa15.72■□□□□ 0.11
ERCC1-201ENST00000013807 ATP1A1P05023 1023 aaKnown RBP15.72■□□□□ 0.11
ERCC1-201ENST00000013807 TPM3P06753 285 aa15.72■□□□□ 0.11
ERCC1-201ENST00000013807 F3P13726 295 aa15.72■□□□□ 0.11
ERCC1-201ENST00000013807 SLC2A4P14672 509 aa15.72■□□□□ 0.11
ERCC1-201ENST00000013807 ITGB6P18564 788 aa15.72■□□□□ 0.11
ERCC1-201ENST00000013807 WT1P19544 449 aaPredicted RBP15.72■□□□□ 0.11
ERCC1-201ENST00000013807 CSTF2P33240 577 aaKnown RBP eCLIP15.72■□□□□ 0.11
ERCC1-201ENST00000013807 CD86P42081 329 aa15.72■□□□□ 0.11
ERCC1-201ENST00000013807 EPHA4P54764 986 aa15.72■□□□□ 0.11
ERCC1-201ENST00000013807 DCDC1P59894 354 aa15.72■□□□□ 0.11
ERCC1-201ENST00000013807 ZBTB17Q13105 803 aa15.72■□□□□ 0.11
ERCC1-201ENST00000013807 TCEAL1Q15170 157 aa15.72■□□□□ 0.11
ERCC1-201ENST00000013807 PDPK2PQ6A1A2 396 aa15.72■□□□□ 0.11
ERCC1-201ENST00000013807 MARK2Q7KZI7 788 aaKnown RBP15.72■□□□□ 0.11
ERCC1-201ENST00000013807 TMC3Q7Z5M5 1100 aa15.72■□□□□ 0.11
ERCC1-201ENST00000013807 CCNYQ8ND76 341 aa15.72■□□□□ 0.11
ERCC1-201ENST00000013807 OR10G6Q8NH81 332 aa15.72■□□□□ 0.11
ERCC1-201ENST00000013807 SLC35G2Q8TBE7 412 aa15.72■□□□□ 0.11
ERCC1-201ENST00000013807 SH3KBP1Q96B97 665 aa15.72■□□□□ 0.11
ERCC1-201ENST00000013807 OLFM3Q96PB7 478 aa15.72■□□□□ 0.11
ERCC1-201ENST00000013807 TEFMQ96QE5 360 aaKnown RBP15.72■□□□□ 0.11
ERCC1-201ENST00000013807 SLC38A3Q99624 504 aa15.72■□□□□ 0.11
ERCC1-201ENST00000013807 SLC12A9Q9BXP2 914 aa15.72■□□□□ 0.11
ERCC1-201ENST00000013807 XPO4Q9C0E2 1151 aaKnown RBP15.72■□□□□ 0.11
ERCC1-201ENST00000013807 BRD8Q9H0E9 1235 aa15.72■□□□□ 0.11
ERCC1-201ENST00000013807 EPB41L1Q9H4G0 881 aa15.72■□□□□ 0.11
ERCC1-201ENST00000013807 ZNHIT2Q9UHR6 403 aa15.72■□□□□ 0.11
ERCC1-201ENST00000013807 KIR2DS5A0A0G2JLQ3 304 aa15.71■□□□□ 0.11
ERCC1-201ENST00000013807 A0A0G2JNG1 304 aa15.71■□□□□ 0.11
ERCC1-201ENST00000013807 KIR2DS3K7RE56 304 aa15.71■□□□□ 0.11
ERCC1-201ENST00000013807 CHUKO15111 745 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms