RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 HMOX2P30519 316 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 SHMT2P34897 504 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 MAGEA10P43363 369 aaPredicted RBP13.97□□□□□ -0.17
USH1C-201ENST00000005226 PSEN2P49810 448 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 CRYBB1P53674 252 aaPredicted RBP13.97□□□□□ -0.17
USH1C-201ENST00000005226 C21orf59P57076 290 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 ADAM17P78536 824 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 CDC42EP1Q00587 391 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 PPP1R8Q12972 351 aaKnown RBP13.97□□□□□ -0.17
USH1C-201ENST00000005226 EIF4EBP2Q13542 120 aaPredicted RBP13.97□□□□□ -0.17
USH1C-201ENST00000005226 TMTC4Q5T4D3 741 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 MARC1Q5VT66 337 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 KANK2Q63ZY3 851 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 ANKRD26P1Q6NSI1 321 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 UGT3A1Q6NUS8 523 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 CROCCP3Q8IVE0 287 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 CCDC117Q8IWD4 279 aaPredicted RBP13.97□□□□□ -0.17
USH1C-201ENST00000005226 SCN4BQ8IWT1 228 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 ADAMTS16Q8TE57 1224 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 GFM2Q969S9 779 aaKnown RBP13.97□□□□□ -0.17
USH1C-201ENST00000005226 PLEKHA8Q96JA3 519 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 CHID1Q9BWS9 393 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 ABHD16BQ9H3Z7 469 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 ADARB2Q9NS39 739 aaKnown RBP13.97□□□□□ -0.17
USH1C-201ENST00000005226 GALPQ9UBC7 116 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 ZNHIT2Q9UHR6 403 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 ANAPC2Q9UJX6 822 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 GPR45Q9Y5Y3 372 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 A0A1W2PQH9 124 aa13.96□□□□□ -0.17
USH1C-201ENST00000005226 H0Y858 1186 aa13.96□□□□□ -0.17
USH1C-201ENST00000005226 CDC7O00311 574 aa13.96□□□□□ -0.17
USH1C-201ENST00000005226 ITGB1P05556 798 aa13.96□□□□□ -0.17
USH1C-201ENST00000005226 FUT4P22083 530 aa13.96□□□□□ -0.17
USH1C-201ENST00000005226 BMXP51813 675 aa13.96□□□□□ -0.17
USH1C-201ENST00000005226 ZNF135P52742 658 aaPredicted RBP13.96□□□□□ -0.17
USH1C-201ENST00000005226 CLCQ05315 142 aa13.96□□□□□ -0.17
USH1C-201ENST00000005226 CBX3Q13185 183 aa13.96□□□□□ -0.17
USH1C-201ENST00000005226 TGFBIQ15582 683 aa13.96□□□□□ -0.17
USH1C-201ENST00000005226 TIGD7Q6NT04 549 aaPredicted RBP13.96□□□□□ -0.17
USH1C-201ENST00000005226 PAQR3Q6TCH7 311 aa13.96□□□□□ -0.17
USH1C-201ENST00000005226 ITIH5Q86UX2 942 aa13.96□□□□□ -0.17
USH1C-201ENST00000005226 DCP1BQ8IZD4 617 aaKnown RBP13.96□□□□□ -0.17
USH1C-201ENST00000005226 TMEM86AQ8N2M4 240 aa13.96□□□□□ -0.17
USH1C-201ENST00000005226 MFSD1Q9H3U5 465 aa13.96□□□□□ -0.17
USH1C-201ENST00000005226 TLR9Q9NR96 1032 aa13.96□□□□□ -0.17
USH1C-201ENST00000005226 FNDC3AQ9Y2H6 1198 aaKnown RBP13.96□□□□□ -0.17
USH1C-201ENST00000005226 MROH6A6NGR9 719 aa13.96□□□□□ -0.18
USH1C-201ENST00000005226 CD3EAPO15446 510 aaKnown RBP13.96□□□□□ -0.18
USH1C-201ENST00000005226 FGF10O15520 208 aaPredicted RBP13.96□□□□□ -0.18
USH1C-201ENST00000005226 SLC7A4O43246 635 aa13.96□□□□□ -0.18
USH1C-201ENST00000005226 HRH2P25021 359 aa13.96□□□□□ -0.18
USH1C-201ENST00000005226 IL12AP29459 219 aa13.96□□□□□ -0.18
USH1C-201ENST00000005226 FMO4P31512 558 aa13.96□□□□□ -0.18
USH1C-201ENST00000005226 GRIK1P39086 918 aa13.96□□□□□ -0.18
USH1C-201ENST00000005226 IST1P53990 364 aa13.96□□□□□ -0.18
USH1C-201ENST00000005226 MLLT10P55197 1068 aa13.96□□□□□ -0.18
USH1C-201ENST00000005226 BNIP2Q12982 314 aa13.96□□□□□ -0.18
USH1C-201ENST00000005226 IQSEC1Q6DN90 963 aa13.96□□□□□ -0.18
USH1C-201ENST00000005226 C16orf87Q6PH81 154 aa13.96□□□□□ -0.18
USH1C-201ENST00000005226 SLC2A7Q6PXP3 512 aa13.96□□□□□ -0.18
USH1C-201ENST00000005226 RAB44Q7Z6P3 723 aaPredicted RBP13.96□□□□□ -0.18
USH1C-201ENST00000005226 CDK15Q96Q40 435 aa13.96□□□□□ -0.18
USH1C-201ENST00000005226 ZNF408Q9H9D4 720 aa13.96□□□□□ -0.18
USH1C-201ENST00000005226 ARNT2Q9HBZ2 717 aa13.96□□□□□ -0.18
USH1C-201ENST00000005226 ATP13A1Q9HD20 1204 aa13.96□□□□□ -0.18
USH1C-201ENST00000005226 FAM105AQ9NUU6 356 aa13.96□□□□□ -0.18
USH1C-201ENST00000005226 TBC1D23Q9NUY8 699 aa13.96□□□□□ -0.18
USH1C-201ENST00000005226 PTBP2Q9UKA9 531 aaKnown RBP13.96□□□□□ -0.18
USH1C-201ENST00000005226 CDH7Q9ULB5 785 aa13.96□□□□□ -0.18
USH1C-201ENST00000005226 ST3GAL5Q9UNP4 418 aa13.96□□□□□ -0.18
USH1C-201ENST00000005226 TRIM64A6NGJ6 449 aa13.95□□□□□ -0.18
USH1C-201ENST00000005226 RSL1D1O76021 490 aaKnown RBP13.95□□□□□ -0.18
USH1C-201ENST00000005226 TBX18O95935 607 aa13.95□□□□□ -0.18
USH1C-201ENST00000005226 C1RP00736 705 aa13.95□□□□□ -0.18
USH1C-201ENST00000005226 LDLRP01130 860 aa13.95□□□□□ -0.18
USH1C-201ENST00000005226 FUCA1P04066 466 aa13.95□□□□□ -0.18
USH1C-201ENST00000005226 FGF4P08620 206 aa13.95□□□□□ -0.18
USH1C-201ENST00000005226 TCF3P15923 654 aa13.95□□□□□ -0.18
USH1C-201ENST00000005226 FDXRP22570 491 aa13.95□□□□□ -0.18
USH1C-201ENST00000005226 DCKP27707 260 aa13.95□□□□□ -0.18
USH1C-201ENST00000005226 PCSK1P29120 753 aa13.95□□□□□ -0.18
USH1C-201ENST00000005226 ZFP36L2P47974 494 aaKnown RBP13.95□□□□□ -0.18
USH1C-201ENST00000005226 SELPLGQ14242 412 aa13.95□□□□□ -0.18
USH1C-201ENST00000005226 TSNQ15631 228 aaKnown RBP13.95□□□□□ -0.18
USH1C-201ENST00000005226 SLC44A4Q53GD3 710 aa13.95□□□□□ -0.18
USH1C-201ENST00000005226 PRMT9Q6P2P2 845 aa13.95□□□□□ -0.18
USH1C-201ENST00000005226 SLC15A4Q8N697 577 aa13.95□□□□□ -0.18
USH1C-201ENST00000005226 OR2T11Q8NH01 316 aa13.95□□□□□ -0.18
USH1C-201ENST00000005226 GPR152Q8TDT2 470 aa13.95□□□□□ -0.18
USH1C-201ENST00000005226 ATOH8Q96SQ7 321 aa13.95□□□□□ -0.18
USH1C-201ENST00000005226 NANOGQ9H9S0 305 aa13.95□□□□□ -0.18
USH1C-201ENST00000005226 MRGBPQ9NV56 204 aa13.95□□□□□ -0.18
USH1C-201ENST00000005226 ASB1Q9Y576 335 aa13.95□□□□□ -0.18
USH1C-201ENST00000005226 GLP2RO95838 553 aa13.95□□□□□ -0.18
USH1C-201ENST00000005226 HMBSP08397 361 aa13.95□□□□□ -0.18
USH1C-201ENST00000005226 ATXN1LP0C7T5 689 aaKnown RBP13.95□□□□□ -0.18
USH1C-201ENST00000005226 ZNF37AP17032 561 aaPredicted RBP13.95□□□□□ -0.18
USH1C-201ENST00000005226 HOXC13P31276 330 aa13.95□□□□□ -0.18
USH1C-201ENST00000005226 GPR15P49685 360 aa13.95□□□□□ -0.18
USH1C-201ENST00000005226 MLLT6P55198 1093 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms