RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 GALNT13Q8IUC8 556 aa16.61■□□□□ 0.25
PHGDH-213ENST00000641272 SLC37A2Q8TED4 501 aa16.61■□□□□ 0.25
PHGDH-213ENST00000641272 ART4Q93070 314 aa16.61■□□□□ 0.25
PHGDH-213ENST00000641272 CBX8Q9HC52 389 aa16.61■□□□□ 0.25
PHGDH-213ENST00000641272 RBM22Q9NW64 420 aaKnown RBP eCLIP16.61■□□□□ 0.25
PHGDH-213ENST00000641272 RCOR3Q9P2K3 495 aaPredicted RBP16.61■□□□□ 0.25
PHGDH-213ENST00000641272 PCDHB11Q9Y5F2 797 aa16.61■□□□□ 0.25
PHGDH-213ENST00000641272 OAS3Q9Y6K5 1087 aaKnown RBP16.61■□□□□ 0.25
PHGDH-213ENST00000641272 ASH1LQ9NR48 2969 aaKnown RBP16.6■□□□□ 0.25
PHGDH-213ENST00000641272 A0A1W2PQJ5 194 aa16.6■□□□□ 0.25
PHGDH-213ENST00000641272 SYCE3A1L190 88 aa16.6■□□□□ 0.25
PHGDH-213ENST00000641272 MYO1FO00160 1098 aa16.6■□□□□ 0.25
PHGDH-213ENST00000641272 HGSO14964 777 aaPredicted RBP16.6■□□□□ 0.25
PHGDH-213ENST00000641272 CLDN7O95471 211 aa16.6■□□□□ 0.25
PHGDH-213ENST00000641272 SLC4A1P02730 911 aa16.6■□□□□ 0.25
PHGDH-213ENST00000641272 FGF3P11487 239 aaPredicted RBP16.6■□□□□ 0.25
PHGDH-213ENST00000641272 PBX1P40424 430 aa16.6■□□□□ 0.25
PHGDH-213ENST00000641272 ARSDP51689 593 aa16.6■□□□□ 0.25
PHGDH-213ENST00000641272 ARSEP51690 589 aa16.6■□□□□ 0.25
PHGDH-213ENST00000641272 LIMK2P53671 638 aa16.6■□□□□ 0.25
PHGDH-213ENST00000641272 TAS2R40P59535 323 aa16.6■□□□□ 0.25
PHGDH-213ENST00000641272 PTSQ03393 145 aa16.6■□□□□ 0.25
PHGDH-213ENST00000641272 GBE1Q04446 702 aa16.6■□□□□ 0.25
PHGDH-213ENST00000641272 NIPAL4Q0D2K0 466 aa16.6■□□□□ 0.25
PHGDH-213ENST00000641272 HADHQ16836 314 aaKnown RBP16.6■□□□□ 0.25
PHGDH-213ENST00000641272 PYCR3Q53H96 274 aa16.6■□□□□ 0.25
PHGDH-213ENST00000641272 SNAP47Q5SQN1 464 aa16.6■□□□□ 0.25
PHGDH-213ENST00000641272 TMEM164Q5U3C3 297 aa16.6■□□□□ 0.25
PHGDH-213ENST00000641272 ALKBH5Q6P6C2 394 aaKnown RBP16.6■□□□□ 0.25
PHGDH-213ENST00000641272 FAM129CQ86XR2 697 aa16.6■□□□□ 0.25
PHGDH-213ENST00000641272 DTX1Q86Y01 620 aa16.6■□□□□ 0.25
PHGDH-213ENST00000641272 NDUFAF2Q8N183 169 aa16.6■□□□□ 0.25
PHGDH-213ENST00000641272 MAML1Q92585 1016 aa16.6■□□□□ 0.25
PHGDH-213ENST00000641272 PACSIN1Q9BY11 444 aa16.6■□□□□ 0.25
PHGDH-213ENST00000641272 CTTNBP2NLQ9P2B4 639 aa16.6■□□□□ 0.25
PHGDH-213ENST00000641272 KCNK6Q9Y257 313 aa16.6■□□□□ 0.25
PHGDH-213ENST00000641272 PPIL1Q9Y3C6 166 aa16.6■□□□□ 0.25
PHGDH-213ENST00000641272 HEMK1Q9Y5R4 338 aaPredicted RBP16.6■□□□□ 0.25
PHGDH-213ENST00000641272 FLNBO75369 2602 aaKnown RBP16.59■□□□□ 0.25
PHGDH-213ENST00000641272 C1orf232A0A0U1RR37 186 aa16.59■□□□□ 0.25
PHGDH-213ENST00000641272 STMND1H3BQB6 276 aa16.59■□□□□ 0.25
PHGDH-213ENST00000641272 PRLP01236 227 aa16.59■□□□□ 0.25
PHGDH-213ENST00000641272 THRAP10827 490 aa16.59■□□□□ 0.25
PHGDH-213ENST00000641272 ZNF30P17039 623 aa16.59■□□□□ 0.25
PHGDH-213ENST00000641272 MAPK9P45984 424 aa16.59■□□□□ 0.25
PHGDH-213ENST00000641272 ZBED6P86452 979 aa16.59■□□□□ 0.25
PHGDH-213ENST00000641272 PAFAH1B3Q15102 231 aaKnown RBP16.59■□□□□ 0.25
PHGDH-213ENST00000641272 ANKRD20A8PQ5CZ79 823 aa16.59■□□□□ 0.25
PHGDH-213ENST00000641272 ZFYVE27Q5T4F4 411 aa16.59■□□□□ 0.25
PHGDH-213ENST00000641272 ALG1LQ6GMV1 187 aa16.59■□□□□ 0.25
PHGDH-213ENST00000641272 TIGD7Q6NT04 549 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-213ENST00000641272 ZNF765Q7L2R6 523 aa16.59■□□□□ 0.25
PHGDH-213ENST00000641272 CHST15Q7LFX5 561 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-213ENST00000641272 FAM71BQ8TC56 605 aa16.59■□□□□ 0.25
PHGDH-213ENST00000641272 SCARF2Q96GP6 870 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-213ENST00000641272 ZNF670Q9BS34 389 aa16.59■□□□□ 0.25
PHGDH-213ENST00000641272 FAM117AQ9C073 453 aa16.59■□□□□ 0.25
PHGDH-213ENST00000641272 BRD8Q9H0E9 1235 aa16.59■□□□□ 0.25
PHGDH-213ENST00000641272 PCDH9Q9HC56 1237 aa16.59■□□□□ 0.25
PHGDH-213ENST00000641272 ARFGAP3Q9NP61 516 aa16.59■□□□□ 0.25
PHGDH-213ENST00000641272 OCIAD1Q9NX40 245 aa16.59■□□□□ 0.25
PHGDH-213ENST00000641272 B3GALT1Q9Y5Z6 326 aa16.59■□□□□ 0.25
PHGDH-213ENST00000641272 EFCAB7A8K855 629 aa16.58■□□□□ 0.24
PHGDH-213ENST00000641272 FADS2P1A8MWK0 482 aa16.58■□□□□ 0.24
PHGDH-213ENST00000641272 MATN3O15232 486 aa16.58■□□□□ 0.24
PHGDH-213ENST00000641272 GYPCP04921 128 aa16.58■□□□□ 0.24
PHGDH-213ENST00000641272 ACP5P13686 325 aa16.58■□□□□ 0.24
PHGDH-213ENST00000641272 CSTF2P33240 577 aaKnown RBP eCLIP16.58■□□□□ 0.24
PHGDH-213ENST00000641272 GPR3P46089 330 aa16.58■□□□□ 0.24
PHGDH-213ENST00000641272 UBASH3AP57075 661 aa16.58■□□□□ 0.24
PHGDH-213ENST00000641272 TPM4P67936 248 aa16.58■□□□□ 0.24
PHGDH-213ENST00000641272 NFATC2Q13469 925 aa16.58■□□□□ 0.24
PHGDH-213ENST00000641272 GALNT3Q14435 633 aa16.58■□□□□ 0.24
PHGDH-213ENST00000641272 TBR1Q16650 682 aa16.58■□□□□ 0.24
PHGDH-213ENST00000641272 IFI16Q16666 785 aaKnown RBP16.58■□□□□ 0.24
PHGDH-213ENST00000641272 ALS2CLQ60I27 953 aa16.58■□□□□ 0.24
PHGDH-213ENST00000641272 PQLC3Q8N755 202 aa16.58■□□□□ 0.24
PHGDH-213ENST00000641272 ZSCAN1Q8NBB4 408 aa16.58■□□□□ 0.24
PHGDH-213ENST00000641272 KCTD6Q8NC69 237 aa16.58■□□□□ 0.24
PHGDH-213ENST00000641272 OR4D9Q8NGE8 314 aa16.58■□□□□ 0.24
PHGDH-213ENST00000641272 ARRDC2Q8TBH0 407 aa16.58■□□□□ 0.24
PHGDH-213ENST00000641272 RNF31Q96EP0 1072 aa16.58■□□□□ 0.24
PHGDH-213ENST00000641272 AHCYL2Q96HN2 611 aaKnown RBP16.58■□□□□ 0.24
PHGDH-213ENST00000641272 COX14Q96I36 57 aa16.58■□□□□ 0.24
PHGDH-213ENST00000641272 SLC38A3Q99624 504 aa16.58■□□□□ 0.24
PHGDH-213ENST00000641272 CEP41Q9BYV8 373 aa16.58■□□□□ 0.24
PHGDH-213ENST00000641272 KLHL3Q9UH77 587 aa16.58■□□□□ 0.24
PHGDH-213ENST00000641272 ZNHIT2Q9UHR6 403 aa16.58■□□□□ 0.24
PHGDH-213ENST00000641272 BZW2Q9Y6E2 419 aaKnown RBP16.58■□□□□ 0.24
PHGDH-213ENST00000641272 MYO18BQ8IUG5 2567 aa16.57■□□□□ 0.24
PHGDH-213ENST00000641272 A8MU76 341 aa16.57■□□□□ 0.24
PHGDH-213ENST00000641272 KCNK1O00180 336 aa16.57■□□□□ 0.24
PHGDH-213ENST00000641272 ZW10O43264 779 aa16.57■□□□□ 0.24
PHGDH-213ENST00000641272 SNX2O60749 519 aa16.57■□□□□ 0.24
PHGDH-213ENST00000641272 PROSCO94903 275 aa16.57■□□□□ 0.24
PHGDH-213ENST00000641272 CA4P22748 312 aa16.57■□□□□ 0.24
PHGDH-213ENST00000641272 CD82P27701 267 aa16.57■□□□□ 0.24
PHGDH-213ENST00000641272 CD86P42081 329 aa16.57■□□□□ 0.24
PHGDH-213ENST00000641272 ATP1A2P50993 1020 aa16.57■□□□□ 0.24
PHGDH-213ENST00000641272 ZBTB17Q13105 803 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms