RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 SUPT3HB4E1H0 165 aa21.41■■□□□ 1.02
CLN6-224ENST00000638076 SUPT3HO75486 399 aa21.41■■□□□ 1.02
CLN6-224ENST00000638076 ATP6AP2O75787 350 aa21.41■■□□□ 1.02
CLN6-224ENST00000638076 TTPAP49638 278 aa21.41■■□□□ 1.02
CLN6-224ENST00000638076 UGT3A2Q3SY77 523 aa21.41■■□□□ 1.02
CLN6-224ENST00000638076 PIGGQ5H8A4 983 aa21.41■■□□□ 1.02
CLN6-224ENST00000638076 Q6ZNB5 142 aa21.41■■□□□ 1.02
CLN6-224ENST00000638076 DHDDSQ86SQ9 333 aa21.41■■□□□ 1.02
CLN6-224ENST00000638076 USP13Q92995 863 aaPredicted RBP21.41■■□□□ 1.02
CLN6-224ENST00000638076 NSUN5Q96P11 429 aaKnown RBP21.41■■□□□ 1.02
CLN6-224ENST00000638076 YY1AP1Q9H869 796 aa21.41■■□□□ 1.02
CLN6-224ENST00000638076 MRPL17Q9NRX2 175 aaKnown RBP21.41■■□□□ 1.02
CLN6-224ENST00000638076 MRGBPQ9NV56 204 aa21.41■■□□□ 1.02
CLN6-224ENST00000638076 LRCH1Q9Y2L9 728 aa21.41■■□□□ 1.02
CLN6-224ENST00000638076 TEX28O15482 410 aa21.41■■□□□ 1.02
CLN6-224ENST00000638076 CDK14O94921 469 aa21.41■■□□□ 1.02
CLN6-224ENST00000638076 DPP6P42658 865 aa21.41■■□□□ 1.02
CLN6-224ENST00000638076 THOP1P52888 689 aa21.41■■□□□ 1.02
CLN6-224ENST00000638076 ZNF423Q2M1K9 1284 aa21.41■■□□□ 1.02
CLN6-224ENST00000638076 DIS3LQ8TF46 1054 aaKnown RBP21.41■■□□□ 1.02
CLN6-224ENST00000638076 C19orf60Q96EN9 201 aa21.41■■□□□ 1.02
CLN6-224ENST00000638076 ALG14Q96F25 216 aa21.41■■□□□ 1.02
CLN6-224ENST00000638076 ASB2Q96Q27 587 aa21.41■■□□□ 1.02
CLN6-224ENST00000638076 SLC30A3Q99726 388 aa21.41■■□□□ 1.02
CLN6-224ENST00000638076 MID1IP1Q9NPA3 183 aa21.41■■□□□ 1.02
CLN6-224ENST00000638076 OAS3Q9Y6K5 1087 aaKnown RBP21.41■■□□□ 1.02
CLN6-224ENST00000638076 ABHD14A-ACY1A0A1B0GW23 586 aa21.4■■□□□ 1.02
CLN6-224ENST00000638076 K7ERQ8 282 aa21.4■■□□□ 1.02
CLN6-224ENST00000638076 GFRA2O00451 464 aa21.4■■□□□ 1.02
CLN6-224ENST00000638076 PFDN6O15212 129 aa21.4■■□□□ 1.02
CLN6-224ENST00000638076 OLFM2O95897 454 aa21.4■■□□□ 1.02
CLN6-224ENST00000638076 PYGLP06737 847 aa21.4■■□□□ 1.02
CLN6-224ENST00000638076 PKMP14618 531 aaKnown RBP21.4■■□□□ 1.02
CLN6-224ENST00000638076 PKNOX1P55347 436 aa21.4■■□□□ 1.02
CLN6-224ENST00000638076 ATP6V0D1P61421 351 aa21.4■■□□□ 1.02
CLN6-224ENST00000638076 BLMHQ13867 455 aa21.4■■□□□ 1.02
CLN6-224ENST00000638076 FASTKQ14296 549 aaKnown RBP21.4■■□□□ 1.02
CLN6-224ENST00000638076 TSNQ15631 228 aaKnown RBP21.4■■□□□ 1.02
CLN6-224ENST00000638076 GEN1Q17RS7 908 aa21.4■■□□□ 1.02
CLN6-224ENST00000638076 PABPC1LQ4VXU2 614 aaKnown RBP21.4■■□□□ 1.02
CLN6-224ENST00000638076 LARP4Q71RC2 724 aaKnown RBP eCLIP21.4■■□□□ 1.024e-6■□□□□ 9.4
CLN6-224ENST00000638076 ITIH5Q86UX2 942 aa21.4■■□□□ 1.02
CLN6-224ENST00000638076 KBTBD6Q86V97 674 aa21.4■■□□□ 1.02
CLN6-224ENST00000638076 C3orf30Q96M34 536 aa21.4■■□□□ 1.02
CLN6-224ENST00000638076 DNAJC15Q9Y5T4 150 aa21.4■■□□□ 1.02
CLN6-224ENST00000638076 PLXNA4Q9HCM2 1894 aa21.4■■□□□ 1.02
CLN6-224ENST00000638076 PSMD12O00232 456 aaPredicted RBP21.4■■□□□ 1.02
CLN6-224ENST00000638076 FZD6O60353 706 aa21.4■■□□□ 1.02
CLN6-224ENST00000638076 CLASP2O75122 1294 aaKnown RBP21.4■■□□□ 1.02
CLN6-224ENST00000638076 NIPSNAP2O75323 286 aa21.4■■□□□ 1.02
CLN6-224ENST00000638076 CA8P35219 290 aa21.4■■□□□ 1.02
CLN6-224ENST00000638076 CYP4F8P98187 520 aa21.4■■□□□ 1.02
CLN6-224ENST00000638076 CTSL3PQ5NE16 218 aa21.4■■□□□ 1.02
CLN6-224ENST00000638076 IZUMO2Q6UXV1 221 aa21.4■■□□□ 1.02
CLN6-224ENST00000638076 MFN1Q8IWA4 741 aa21.4■■□□□ 1.02
CLN6-224ENST00000638076 FBXO39Q8N4B4 442 aa21.4■■□□□ 1.02
CLN6-224ENST00000638076 MRPL1Q9BYD6 325 aaKnown RBP21.4■■□□□ 1.02
CLN6-224ENST00000638076 TM6SF2Q9BZW4 377 aa21.4■■□□□ 1.02
CLN6-224ENST00000638076 HACD3Q9P035 362 aa21.4■■□□□ 1.02
CLN6-224ENST00000638076 CCDC167Q9P0B6 97 aa21.4■■□□□ 1.02
CLN6-224ENST00000638076 STX16-NPEPL1H3BU86 382 aa21.39■■□□□ 1.02
CLN6-224ENST00000638076 CDC7O00311 574 aa21.39■■□□□ 1.02
CLN6-224ENST00000638076 VPS26AO75436 327 aa21.39■■□□□ 1.02
CLN6-224ENST00000638076 ECI2O75521 394 aa21.39■■□□□ 1.02
CLN6-224ENST00000638076 PRAMEF12O95522 483 aa21.39■■□□□ 1.02
CLN6-224ENST00000638076 RAG1P15918 1043 aa21.39■■□□□ 1.02
CLN6-224ENST00000638076 CEACAM7Q14002 265 aa21.39■■□□□ 1.02
CLN6-224ENST00000638076 AGKQ53H12 422 aa21.39■■□□□ 1.02
CLN6-224ENST00000638076 APCDD1Q8J025 514 aa21.39■■□□□ 1.02
CLN6-224ENST00000638076 NKAPQ8N5F7 415 aaKnown RBP21.39■■□□□ 1.02
CLN6-224ENST00000638076 RNF148Q8N7C7 305 aa21.39■■□□□ 1.02
CLN6-224ENST00000638076 DCAF4L2Q8NA75 395 aa21.39■■□□□ 1.02
CLN6-224ENST00000638076 SIDT2Q8NBJ9 832 aaKnown RBP21.39■■□□□ 1.02
CLN6-224ENST00000638076 TRPC4APQ8TEL6 797 aa21.39■■□□□ 1.02
CLN6-224ENST00000638076 LAMA2P24043 3122 aaKnown RBP21.39■■□□□ 1.01
CLN6-224ENST00000638076 H7C0S8 307 aa21.39■■□□□ 1.01
CLN6-224ENST00000638076 GPR39O43194 453 aa21.39■■□□□ 1.01
CLN6-224ENST00000638076 FGF4P08620 206 aa21.39■■□□□ 1.01
CLN6-224ENST00000638076 CTPS1P17812 591 aa21.39■■□□□ 1.01
CLN6-224ENST00000638076 XRCC1P18887 633 aaPredicted RBP21.39■■□□□ 1.01
CLN6-224ENST00000638076 GABRR2P28476 465 aa21.39■■□□□ 1.01
CLN6-224ENST00000638076 EEF1DP29692 281 aaKnown RBP21.39■■□□□ 1.01
CLN6-224ENST00000638076 PTK2BQ14289 1009 aa21.39■■□□□ 1.01
CLN6-224ENST00000638076 FBXO48Q5FWF7 155 aa21.39■■□□□ 1.01
CLN6-224ENST00000638076 TAS2R42Q7RTR8 314 aa21.39■■□□□ 1.01
CLN6-224ENST00000638076 DDI1Q8WTU0 396 aa21.39■■□□□ 1.01
CLN6-224ENST00000638076 FBRSL1Q9HCM7 1045 aaKnown RBP21.39■■□□□ 1.01
CLN6-224ENST00000638076 DNMT3BQ9UBC3 853 aaKnown RBP21.39■■□□□ 1.01
CLN6-224ENST00000638076 ADAMTS6Q9UKP5 1117 aa21.39■■□□□ 1.01
CLN6-224ENST00000638076 PKP3Q9Y446 797 aa21.39■■□□□ 1.01
CLN6-224ENST00000638076 NPEPPSL1A6NEC2 478 aa21.38■■□□□ 1.01
CLN6-224ENST00000638076 BTN3A1O00481 513 aa21.38■■□□□ 1.01
CLN6-224ENST00000638076 MSX2P35548 267 aaPredicted RBP21.38■■□□□ 1.01
CLN6-224ENST00000638076 FOXA1P55317 472 aa21.38■■□□□ 1.01
CLN6-224ENST00000638076 MAPRE2Q15555 327 aa21.38■■□□□ 1.01
CLN6-224ENST00000638076 C1orf53Q5VUE5 145 aa21.38■■□□□ 1.01
CLN6-224ENST00000638076 CMTR2Q8IYT2 770 aaKnown RBP21.38■■□□□ 1.01
CLN6-224ENST00000638076 OR6K2Q8NGY2 324 aa21.38■■□□□ 1.01
CLN6-224ENST00000638076 FUBP1Q96AE4 644 aaKnown RBP21.38■■□□□ 1.01
CLN6-224ENST00000638076 EID2BQ96D98 161 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms