RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 MARK2Q7KZI7 788 aaKnown RBP18.85■□□□□ 0.61
CLN6-213ENST00000636212 NRROSQ86YC3 692 aa18.85■□□□□ 0.61
CLN6-213ENST00000636212 CNTD1Q8N815 330 aa18.85■□□□□ 0.61
CLN6-213ENST00000636212 TC2NQ8N9U0 490 aa18.85■□□□□ 0.61
CLN6-213ENST00000636212 TMEM159Q96B96 161 aa18.85■□□□□ 0.61
CLN6-213ENST00000636212 CRELD1Q96HD1 420 aa18.85■□□□□ 0.61
CLN6-213ENST00000636212 OLFM3Q96PB7 478 aa18.85■□□□□ 0.61
CLN6-213ENST00000636212 SRPK1Q96SB4 655 aaKnown RBP18.85■□□□□ 0.61
CLN6-213ENST00000636212 CEP41Q9BYV8 373 aa18.85■□□□□ 0.61
CLN6-213ENST00000636212 FOXP3Q9BZS1 431 aa18.85■□□□□ 0.61
CLN6-213ENST00000636212 SLC25A51Q9H1U9 297 aa18.85■□□□□ 0.61
CLN6-213ENST00000636212 AKAP7Q9P0M2 348 aaPredicted RBP18.85■□□□□ 0.61
CLN6-213ENST00000636212 VPS18Q9P253 973 aa18.85■□□□□ 0.61
CLN6-213ENST00000636212 ALG6Q9Y672 507 aa18.85■□□□□ 0.61
CLN6-213ENST00000636212 KLK10O43240 276 aa18.84■□□□□ 0.61
CLN6-213ENST00000636212 MTSS1O43312 755 aa18.84■□□□□ 0.61
CLN6-213ENST00000636212 ECEL1O95672 775 aa18.84■□□□□ 0.61
CLN6-213ENST00000636212 SOD1P00441 154 aa18.84■□□□□ 0.61
CLN6-213ENST00000636212 FUCA1P04066 466 aa18.84■□□□□ 0.61
CLN6-213ENST00000636212 ITGA2BP08514 1039 aa18.84■□□□□ 0.61
CLN6-213ENST00000636212 ALDH4A1P30038 563 aa18.84■□□□□ 0.61
CLN6-213ENST00000636212 PDX1P52945 283 aa18.84■□□□□ 0.61
CLN6-213ENST00000636212 MAZP56270 477 aaKnown RBP18.84■□□□□ 0.61
CLN6-213ENST00000636212 TMPRSS3P57727 454 aa18.84■□□□□ 0.61
CLN6-213ENST00000636212 CXADRP78310 365 aa18.84■□□□□ 0.61
CLN6-213ENST00000636212 TLE3Q04726 772 aa18.84■□□□□ 0.61
CLN6-213ENST00000636212 GALNT3Q14435 633 aa18.84■□□□□ 0.61
CLN6-213ENST00000636212 IHHQ14623 411 aa18.84■□□□□ 0.61
CLN6-213ENST00000636212 SLC14A2Q15849 920 aa18.84■□□□□ 0.61
CLN6-213ENST00000636212 PCSK7Q16549 785 aa18.84■□□□□ 0.61
CLN6-213ENST00000636212 GPR155Q7Z3F1 870 aa18.84■□□□□ 0.61
CLN6-213ENST00000636212 KDELC2Q7Z4H8 507 aa18.84■□□□□ 0.61
CLN6-213ENST00000636212 TRIM74Q86UV6 250 aa18.84■□□□□ 0.61
CLN6-213ENST00000636212 PIM3Q86V86 326 aa18.84■□□□□ 0.61
CLN6-213ENST00000636212 CCDC50Q8IVM0 306 aa18.84■□□□□ 0.61
CLN6-213ENST00000636212 TFB1MQ8WVM0 346 aaKnown RBP18.84■□□□□ 0.61
CLN6-213ENST00000636212 P3H4Q92791 437 aa18.84■□□□□ 0.61
CLN6-213ENST00000636212 IMP4Q96G21 291 aaKnown RBP18.84■□□□□ 0.61
CLN6-213ENST00000636212 SCARF2Q96GP6 870 aaPredicted RBP18.84■□□□□ 0.61
CLN6-213ENST00000636212 UBL7Q96S82 380 aaPredicted RBP18.84■□□□□ 0.61
CLN6-213ENST00000636212 PRORYQ9H606 182 aa18.84■□□□□ 0.61
CLN6-213ENST00000636212 ZFYVE1Q9HBF4 777 aa18.84■□□□□ 0.61
CLN6-213ENST00000636212 ZNHIT2Q9UHR6 403 aa18.84■□□□□ 0.61
CLN6-213ENST00000636212 ASXL3Q9C0F0 2248 aa18.84■□□□□ 0.61
CLN6-213ENST00000636212 DSPP15924 2871 aaKnown RBP18.83■□□□□ 0.61
CLN6-213ENST00000636212 A0A0A6YYK5 440 aaPredicted RBP18.83■□□□□ 0.6
CLN6-213ENST00000636212 CST8O60676 142 aa18.83■□□□□ 0.6
CLN6-213ENST00000636212 ZRANB2O95218 330 aaKnown RBP eCLIP18.83■□□□□ 0.6
CLN6-213ENST00000636212 CDKN2BP42772 138 aa18.83■□□□□ 0.6
CLN6-213ENST00000636212 PPM1FP49593 454 aaPredicted RBP18.83■□□□□ 0.6
CLN6-213ENST00000636212 CDK18Q07002 472 aa18.83■□□□□ 0.6
CLN6-213ENST00000636212 CLPPQ16740 277 aaPredicted RBP18.83■□□□□ 0.6
CLN6-213ENST00000636212 PYCR3Q53H96 274 aa18.83■□□□□ 0.6
CLN6-213ENST00000636212 TEX44Q53QW1 395 aa18.83■□□□□ 0.6
CLN6-213ENST00000636212 TFDP3Q5H9I0 405 aa18.83■□□□□ 0.6
CLN6-213ENST00000636212 SPOCD1Q6ZMY3 1216 aa18.83■□□□□ 0.6
CLN6-213ENST00000636212 B3GNT8Q7Z7M8 397 aa18.83■□□□□ 0.6
CLN6-213ENST00000636212 JAMLQ86YT9 394 aa18.83■□□□□ 0.6
CLN6-213ENST00000636212 RCOR2Q8IZ40 523 aa18.83■□□□□ 0.6
CLN6-213ENST00000636212 COX14Q96I36 57 aa18.83■□□□□ 0.6
CLN6-213ENST00000636212 RBM41Q96IZ5 413 aaKnown RBP18.83■□□□□ 0.6
CLN6-213ENST00000636212 CALR3Q96L12 384 aaKnown RBP18.83■□□□□ 0.6
CLN6-213ENST00000636212 AGAP2Q99490 1192 aa18.83■□□□□ 0.6
CLN6-213ENST00000636212 CMKLR1Q99788 373 aa18.83■□□□□ 0.6
CLN6-213ENST00000636212 GPR63Q9BZJ6 419 aa18.83■□□□□ 0.6
CLN6-213ENST00000636212 RMI1Q9H9A7 625 aa18.83■□□□□ 0.6
CLN6-213ENST00000636212 GLOD4Q9HC38 313 aa18.83■□□□□ 0.6
CLN6-213ENST00000636212 ATXN7L1Q9ULK2 861 aaPredicted RBP18.83■□□□□ 0.6
CLN6-213ENST00000636212 PCDHA13Q9Y5I0 950 aa18.83■□□□□ 0.6
CLN6-213ENST00000636212 COL27A1Q8IZC6 1860 aaPredicted RBP18.83■□□□□ 0.6
CLN6-213ENST00000636212 RP1P56715 2156 aa18.82■□□□□ 0.6
CLN6-213ENST00000636212 TEX51A0A1B0GUA7 166 aa18.82■□□□□ 0.6
CLN6-213ENST00000636212 CDRT15L2A8MXV6 281 aa18.82■□□□□ 0.6
CLN6-213ENST00000636212 CASC3O15234 703 aaKnown RBP18.82■□□□□ 0.6
CLN6-213ENST00000636212 LCA5LO95447 670 aa18.82■□□□□ 0.6
CLN6-213ENST00000636212 CPNE6O95741 557 aa18.82■□□□□ 0.6
CLN6-213ENST00000636212 UGT1A5P35504 534 aa18.82■□□□□ 0.6
CLN6-213ENST00000636212 GPR3P46089 330 aa18.82■□□□□ 0.6
CLN6-213ENST00000636212 AMZ1Q400G9 498 aa18.82■□□□□ 0.6
CLN6-213ENST00000636212 PHF19Q5T6S3 580 aa18.82■□□□□ 0.6
CLN6-213ENST00000636212 HENMT1Q5T8I9 393 aaKnown RBP18.82■□□□□ 0.6
CLN6-213ENST00000636212 LYSMD3Q7Z3D4 306 aa18.82■□□□□ 0.6
CLN6-213ENST00000636212 CLEC14AQ86T13 490 aa18.82■□□□□ 0.6
CLN6-213ENST00000636212 C17orf82Q86X59 251 aaPredicted RBP18.82■□□□□ 0.6
CLN6-213ENST00000636212 SFTPA2Q8IWL1 248 aa18.82■□□□□ 0.6
CLN6-213ENST00000636212 PTCD2Q8WV60 388 aaKnown RBP18.82■□□□□ 0.6
CLN6-213ENST00000636212 PRR11Q96HE9 360 aaPredicted RBP18.82■□□□□ 0.6
CLN6-213ENST00000636212 FERMT1Q9BQL6 677 aa18.82■□□□□ 0.6
CLN6-213ENST00000636212 SPATA16Q9BXB7 569 aa18.82■□□□□ 0.6
CLN6-213ENST00000636212 ZMYND15Q9H091 742 aa18.82■□□□□ 0.6
CLN6-213ENST00000636212 STN1Q9H668 368 aaKnown RBP18.82■□□□□ 0.6
CLN6-213ENST00000636212 MAGEE1Q9HCI5 957 aa18.82■□□□□ 0.6
CLN6-213ENST00000636212 LOXL2Q9Y4K0 774 aa18.82■□□□□ 0.6
CLN6-213ENST00000636212 A0A1W2PNU3 283 aaPredicted RBP18.81■□□□□ 0.6
CLN6-213ENST00000636212 SLC4A1P02730 911 aa18.81■□□□□ 0.6
CLN6-213ENST00000636212 ATP1A1P05023 1023 aaKnown RBP18.81■□□□□ 0.6
CLN6-213ENST00000636212 SLC2A4P14672 509 aa18.81■□□□□ 0.6
CLN6-213ENST00000636212 NAP1L1P55209 391 aaKnown RBP18.81■□□□□ 0.6
CLN6-213ENST00000636212 B4GALNT1Q00973 533 aa18.81■□□□□ 0.6
CLN6-213ENST00000636212 PRKD1Q15139 912 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms