RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 GPS1Q13098 491 aa15.4■□□□□ 0.06
CLN6-211ENST00000635754 PPP1R7Q15435 360 aa15.4■□□□□ 0.06
CLN6-211ENST00000635754 ALG11Q2TAA5 492 aa15.4■□□□□ 0.06
CLN6-211ENST00000635754 NAXDQ8IW45 347 aa15.4■□□□□ 0.06
CLN6-211ENST00000635754 PHACTR4Q8IZ21 702 aa15.4■□□□□ 0.06
CLN6-211ENST00000635754 OR52K1Q8NGK4 314 aa15.4■□□□□ 0.06
CLN6-211ENST00000635754 SAP25Q8TEE9 199 aa15.4■□□□□ 0.06
CLN6-211ENST00000635754 HIC2Q96JB3 615 aa15.4■□□□□ 0.06
CLN6-211ENST00000635754 RUNDC3BQ96NL0 473 aa15.4■□□□□ 0.06
CLN6-211ENST00000635754 SLC13A1Q9BZW2 595 aa15.4■□□□□ 0.06
CLN6-211ENST00000635754 PIH1D1Q9NWS0 290 aaKnown RBP15.4■□□□□ 0.06
CLN6-211ENST00000635754 APOBEC3BQ9UH17 382 aaKnown RBP15.4■□□□□ 0.06
CLN6-211ENST00000635754 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.39■□□□□ 0.05
CLN6-211ENST00000635754 TMEM202A6NGA9 273 aa15.39■□□□□ 0.05
CLN6-211ENST00000635754 FADS2P1A8MWK0 482 aa15.39■□□□□ 0.05
CLN6-211ENST00000635754 TNFRSF10CO14798 259 aa15.39■□□□□ 0.05
CLN6-211ENST00000635754 TM4SF5O14894 197 aa15.39■□□□□ 0.05
CLN6-211ENST00000635754 INPP4BO15327 924 aa15.39■□□□□ 0.05
CLN6-211ENST00000635754 BUD23O43709 281 aaKnown RBP15.39■□□□□ 0.05
CLN6-211ENST00000635754 PIAS2O75928 621 aa15.39■□□□□ 0.05
CLN6-211ENST00000635754 RASGRP1O95267 797 aa15.39■□□□□ 0.05
CLN6-211ENST00000635754 TPH1P17752 444 aa15.39■□□□□ 0.05
CLN6-211ENST00000635754 SPAM1P38567 509 aa15.39■□□□□ 0.05
CLN6-211ENST00000635754 GRK6P43250 576 aa15.39■□□□□ 0.05
CLN6-211ENST00000635754 ID4P47928 161 aa15.39■□□□□ 0.05
CLN6-211ENST00000635754 MSLNQ13421 630 aaPredicted RBP15.39■□□□□ 0.05
CLN6-211ENST00000635754 SEPT6Q14141 434 aa15.39■□□□□ 0.05
CLN6-211ENST00000635754 PUM1Q14671 1186 aaKnown RBP eCLIP15.39■□□□□ 0.05
CLN6-211ENST00000635754 PDPK2PQ6A1A2 396 aa15.39■□□□□ 0.05
CLN6-211ENST00000635754 DBX2Q6ZNG2 339 aa15.39■□□□□ 0.05
CLN6-211ENST00000635754 GATAD2AQ86YP4 633 aa15.39■□□□□ 0.05
CLN6-211ENST00000635754 HID1Q8IV36 788 aa15.39■□□□□ 0.05
CLN6-211ENST00000635754 TRAM1L1Q8N609 369 aa15.39■□□□□ 0.05
CLN6-211ENST00000635754 SETD7Q8WTS6 366 aaKnown RBP15.39■□□□□ 0.05
CLN6-211ENST00000635754 TSACCQ96A04 125 aaPredicted RBP15.39■□□□□ 0.05
CLN6-211ENST00000635754 PDXPQ96GD0 296 aa15.39■□□□□ 0.05
CLN6-211ENST00000635754 SLC32A1Q9H598 525 aa15.39■□□□□ 0.05
CLN6-211ENST00000635754 FGF22Q9HCT0 170 aa15.39■□□□□ 0.05
CLN6-211ENST00000635754 PCYOX1Q9UHG3 505 aa15.39■□□□□ 0.05
CLN6-211ENST00000635754 KLF15Q9UIH9 416 aa15.39■□□□□ 0.05
CLN6-211ENST00000635754 MOSPD1Q9UJG1 213 aa15.39■□□□□ 0.05
CLN6-211ENST00000635754 NEU2Q9Y3R4 380 aa15.39■□□□□ 0.05
CLN6-211ENST00000635754 GLYATL1P3A0A0U1RQE8 302 aa15.38■□□□□ 0.05
CLN6-211ENST00000635754 PRSS38A1L453 326 aa15.38■□□□□ 0.05
CLN6-211ENST00000635754 KIF2AO00139 706 aaPredicted RBP15.38■□□□□ 0.05
CLN6-211ENST00000635754 AP3B1O00203 1094 aa15.38■□□□□ 0.05
CLN6-211ENST00000635754 SH3BP5O60239 455 aa15.38■□□□□ 0.05
CLN6-211ENST00000635754 TPSB2P20231 275 aa15.38■□□□□ 0.05
CLN6-211ENST00000635754 DGKAP23743 735 aa15.38■□□□□ 0.05
CLN6-211ENST00000635754 HK3P52790 923 aa15.38■□□□□ 0.05
CLN6-211ENST00000635754 CDK16Q00536 496 aa15.38■□□□□ 0.05
CLN6-211ENST00000635754 POU6F1Q14863 301 aa15.38■□□□□ 0.05
CLN6-211ENST00000635754 TPSAB1Q15661 275 aa15.38■□□□□ 0.05
CLN6-211ENST00000635754 KCTD19Q17RG1 926 aaPredicted RBP15.38■□□□□ 0.05
CLN6-211ENST00000635754 RD3Q7Z3Z2 195 aa15.38■□□□□ 0.05
CLN6-211ENST00000635754 PIP4P1Q86T03 277 aa15.38■□□□□ 0.05
CLN6-211ENST00000635754 TRIM74Q86UV6 250 aa15.38■□□□□ 0.05
CLN6-211ENST00000635754 KLHL7Q8IXQ5 586 aa15.38■□□□□ 0.05
CLN6-211ENST00000635754 RBFAQ8N0V3 343 aa15.38■□□□□ 0.05
CLN6-211ENST00000635754 ZNF548Q8NEK5 533 aaPredicted RBP15.38■□□□□ 0.05
CLN6-211ENST00000635754 OR4K2Q8NGD2 314 aa15.38■□□□□ 0.05
CLN6-211ENST00000635754 RHBDD1Q8TEB9 315 aa15.38■□□□□ 0.05
CLN6-211ENST00000635754 SLCO2A1Q92959 643 aa15.38■□□□□ 0.05
CLN6-211ENST00000635754 COX14Q96I36 57 aa15.38■□□□□ 0.05
CLN6-211ENST00000635754 TBATAQ96M53 351 aa15.38■□□□□ 0.05
CLN6-211ENST00000635754 FRMD8Q9BZ67 464 aaPredicted RBP15.38■□□□□ 0.05
CLN6-211ENST00000635754 CASS4Q9NQ75 786 aa15.38■□□□□ 0.05
CLN6-211ENST00000635754 SPASTQ9UBP0 616 aa15.38■□□□□ 0.05
CLN6-211ENST00000635754 PNMA8BQ9ULN7 279 aaPredicted RBP15.38■□□□□ 0.05
CLN6-211ENST00000635754 DGKBQ9Y6T7 804 aa15.38■□□□□ 0.05
CLN6-211ENST00000635754 NEMP2A6NFY4 417 aa15.37■□□□□ 0.05
CLN6-211ENST00000635754 AQP9O43315 295 aa15.37■□□□□ 0.05
CLN6-211ENST00000635754 LDB2O43679 373 aa15.37■□□□□ 0.05
CLN6-211ENST00000635754 TNFP01375 233 aa15.37■□□□□ 0.05
CLN6-211ENST00000635754 TUBB4AP04350 444 aa15.37■□□□□ 0.05
CLN6-211ENST00000635754 CTSEP14091 401 aa15.37■□□□□ 0.05
CLN6-211ENST00000635754 CSRP1P21291 193 aaKnown RBP15.37■□□□□ 0.05
CLN6-211ENST00000635754 HADHAP40939 763 aa15.37■□□□□ 0.05
CLN6-211ENST00000635754 GRIA1P42261 906 aa15.37■□□□□ 0.05
CLN6-211ENST00000635754 ZNF140P52738 457 aaPredicted RBP15.37■□□□□ 0.05
CLN6-211ENST00000635754 TERF1P54274 439 aa15.37■□□□□ 0.05
CLN6-211ENST00000635754 SARNPP82979 210 aaKnown RBP15.37■□□□□ 0.05
CLN6-211ENST00000635754 LAMB3Q13751 1172 aa15.37■□□□□ 0.05
CLN6-211ENST00000635754 PRRT3Q5FWE3 981 aa15.37■□□□□ 0.05
CLN6-211ENST00000635754 DOK6Q6PKX4 331 aa15.37■□□□□ 0.05
CLN6-211ENST00000635754 FAM151BQ6UXP7 276 aa15.37■□□□□ 0.05
CLN6-211ENST00000635754 KANSL1Q7Z3B3 1105 aa15.37■□□□□ 0.05
CLN6-211ENST00000635754 PHYKPLQ8IUZ5 450 aa15.37■□□□□ 0.05
CLN6-211ENST00000635754 DEFB124Q8NES8 71 aa15.37■□□□□ 0.05
CLN6-211ENST00000635754 DTX3LQ8TDB6 740 aa15.37■□□□□ 0.05
CLN6-211ENST00000635754 LMX1AQ8TE12 382 aa15.37■□□□□ 0.05
CLN6-211ENST00000635754 OR1E3Q8WZA6 343 aa15.37■□□□□ 0.05
CLN6-211ENST00000635754 GLYATL1Q969I3 302 aa15.37■□□□□ 0.05
CLN6-211ENST00000635754 C19orf43Q9BQ61 176 aa15.37■□□□□ 0.05
CLN6-211ENST00000635754 TCEAL2Q9H3H9 227 aaPredicted RBP15.37■□□□□ 0.05
CLN6-211ENST00000635754 CYP4F12Q9HCS2 524 aa15.37■□□□□ 0.05
CLN6-211ENST00000635754 IL26Q9NPH9 171 aa15.37■□□□□ 0.05
CLN6-211ENST00000635754 UCKL1Q9NWZ5 548 aa15.37■□□□□ 0.05
CLN6-211ENST00000635754 APPL1Q9UKG1 709 aa15.37■□□□□ 0.05
CLN6-211ENST00000635754 KCTD3Q9Y597 815 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms