RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 OGNP20774 298 aaKnown RBP9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 SAT1P21673 171 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 TYK2P29597 1187 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 HADHAP40939 763 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 MAGEA12P43365 314 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 NEK3P51956 506 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 POLR2LP62875 67 aaKnown RBP9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 PEX6Q13608 980 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 PDE1CQ14123 709 aaPredicted RBP9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 SEMA3AQ14563 771 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 USP10Q14694 798 aaKnown RBP9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 TERF2Q15554 542 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 SEPT7Q16181 437 aaKnown RBP9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 POM121L1PQ3SYA9 428 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 ZNF805Q5CZA5 627 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 PPM1JQ5JR12 505 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 C9orf64Q5T6V5 341 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 EGFLAMQ63HQ2 1017 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 MRNIPQ6NTE8 343 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 BRAT1Q6PJG6 821 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 CNSTQ6PJW8 725 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 CRTC1Q6UUV9 634 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 USP45Q70EL2 814 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 Q7L0L9 218 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 CMC1Q7Z7K0 106 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 GALNT7Q86SF2 657 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 SDCCAG8Q86SQ7 713 aaPredicted RBP9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 TAX1BP1Q86VP1 789 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 SLC41A1Q8IVJ1 513 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 GDAP1Q8TB36 358 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 ACMSDQ8TDX5 336 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 DYDC1Q8WWB3 177 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 OR8D1Q8WZ84 308 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 ISL2Q96A47 359 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 SCRN2Q96FV2 425 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 SGSM3Q96HU1 749 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 MCCC1Q96RQ3 725 aaPredicted RBP9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 LYSMD1Q96S90 227 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 ACOX2Q99424 681 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 CDX2Q99626 313 aaPredicted RBP9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 P2RY13Q9BPV8 354 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 PAIP2Q9BPZ3 127 aaKnown RBP9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 VPS11Q9H270 941 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 TMEM245Q9H330 911 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 C12orf65Q9H3J6 166 aaKnown RBP9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 FAM96AQ9H5X1 160 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 SLC17A7Q9P2U7 560 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 B4GALT6Q9UBX8 382 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 SLC39A10Q9ULF5 831 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 FNDC3AQ9Y2H6 1198 aaKnown RBP9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 TICRRQ7Z2Z1 1910 aa9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 C16orf96A6NNT2 1141 aa9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 UPK3BL1B0FP48 263 aa9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 UPK3BL2E5RIL1 263 aa9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 SPECC1L-ADORA2AF8WAN1 911 aa9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 H7C0S8 307 aa9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 TM9SF1O15321 606 aa9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 ASMTLO95671 621 aa9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 PRNPP04156 253 aa9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 MPOP05164 745 aa9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 CYP2A6P11509 494 aaPredicted RBP9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 FOXN2P32314 431 aa9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 LSP1P33241 339 aa9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 CRHR1P34998 444 aa9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 CCT5P48643 541 aa9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 POLD2P49005 469 aa9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 CLCN5P51795 746 aa9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 XIAPP98170 497 aa9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 TYSND1Q2T9J0 566 aa9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 ZRANB3Q5FWF4 1079 aa9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 RBM20Q5T481 1227 aaKnown RBP9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 HHATQ5VTY9 493 aa9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 LRRC66Q68CR7 880 aa9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 LVRNQ6Q4G3 990 aa9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 CDHR3Q6ZTQ4 885 aa9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 GPATCH11Q8N954 259 aa9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 HCAR2Q8TDS4 363 aa9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 ELMO2Q96JJ3 720 aa9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 NDNQ99608 321 aa9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 PHF7Q9BWX1 381 aaPredicted RBP9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 IQCGQ9H095 443 aaKnown RBP9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 KCNK12Q9HB15 430 aa9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 MKS1Q9NXB0 559 aa9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 CACNA2D2Q9NY47 1150 aa9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 DKK3Q9UBP4 350 aa9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 SUN2Q9UH99 717 aa9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 SARDHQ9UL12 918 aa9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 STARD13Q9Y3M8 1113 aa9.9□□□□□ -0.82
SOX2-OT-244ENST00000627738 XIRP2A4UGR9 3374 aa9.89□□□□□ -0.83
SOX2-OT-244ENST00000627738 A0A096LPK6 155 aa9.89□□□□□ -0.83
SOX2-OT-244ENST00000627738 K7EQS6 105 aa9.89□□□□□ -0.83
SOX2-OT-244ENST00000627738 KPNA3O00505 521 aaPredicted RBP9.89□□□□□ -0.83
SOX2-OT-244ENST00000627738 PHGDHO43175 533 aaKnown RBP9.89□□□□□ -0.83
SOX2-OT-244ENST00000627738 GLRA3O75311 464 aa9.89□□□□□ -0.83
SOX2-OT-244ENST00000627738 TOP3BO95985 862 aaKnown RBP9.89□□□□□ -0.83
SOX2-OT-244ENST00000627738 C2P06681 752 aa9.89□□□□□ -0.83
SOX2-OT-244ENST00000627738 EPHX1P07099 455 aa9.89□□□□□ -0.83
SOX2-OT-244ENST00000627738 ASGR2P07307 311 aa9.89□□□□□ -0.83
SOX2-OT-244ENST00000627738 C1SP09871 688 aa9.89□□□□□ -0.83
SOX2-OT-244ENST00000627738 HNRNPLP14866 589 aaKnown RBP eCLIP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms