RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 ATP6V0D1P61421 351 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 CLCQ05315 142 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 ZNF235Q14590 738 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 LRRC23Q53EV4 343 aaPredicted RBP11.22□□□□□ -0.61
VARS2-213ENST00000625423 PAQR3Q6TCH7 311 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 DCP1BQ8IZD4 617 aaKnown RBP11.22□□□□□ -0.61
VARS2-213ENST00000625423 FIBCD1Q8N539 461 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 MINDY1Q8N5J2 469 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 ATAD1Q8NBU5 361 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 RHEBL1Q8TAI7 183 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 BRSK1Q8TDC3 778 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 TFAP2CQ92754 450 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 LRRC58Q96CX6 371 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 THEGQ9P2T0 379 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 IKZF3Q9UKT9 509 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 TIMM22Q9Y584 194 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 PATJQ8NI35 1801 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 RHOBTB1O94844 696 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 FGF1P05230 155 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 GNAO1P09471 354 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 FMO4P31512 558 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 SOX11P35716 441 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 STC1P52823 247 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 TNK2Q07912 1038 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 C10orf120Q5SQS8 335 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 IRAK1BP1Q5VVH5 260 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 PRMT9Q6P2P2 845 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 EPHX4Q8IUS5 362 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 FEM1CQ96JP0 617 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 TFB2MQ9H5Q4 396 aaKnown RBP11.22□□□□□ -0.61
VARS2-213ENST00000625423 SDR39U1Q9NRG7 319 aaPredicted RBP11.22□□□□□ -0.61
VARS2-213ENST00000625423 RSL24D1Q9UHA3 163 aaKnown RBP11.22□□□□□ -0.61
VARS2-213ENST00000625423 RNF112Q9ULX5 631 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 PRG3Q9Y2Y8 225 aaPredicted RBP11.22□□□□□ -0.61
VARS2-213ENST00000625423 BRCA2P51587 3418 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 SLC12A8A0AV02 714 aa11.21□□□□□ -0.61
VARS2-213ENST00000625423 AQP12BA6NM10 295 aa11.21□□□□□ -0.61
VARS2-213ENST00000625423 FAM155AB1AL88 458 aaPredicted RBP11.21□□□□□ -0.61
VARS2-213ENST00000625423 HNRNPRO43390 633 aaKnown RBP11.21□□□□□ -0.61
VARS2-213ENST00000625423 CRCPO75575 148 aa11.21□□□□□ -0.61
VARS2-213ENST00000625423 HSD17B1P14061 328 aa11.21□□□□□ -0.61
VARS2-213ENST00000625423 PAX3P23760 479 aa11.21□□□□□ -0.61
VARS2-213ENST00000625423 OXTRP30559 389 aa11.21□□□□□ -0.61
VARS2-213ENST00000625423 ALDH3B2P48448 385 aa11.21□□□□□ -0.61
VARS2-213ENST00000625423 INPP5AQ14642 412 aa11.21□□□□□ -0.61
VARS2-213ENST00000625423 IFNEQ86WN2 208 aa11.21□□□□□ -0.61
VARS2-213ENST00000625423 AQP12AQ8IXF9 295 aa11.21□□□□□ -0.61
VARS2-213ENST00000625423 FBXO39Q8N4B4 442 aa11.21□□□□□ -0.61
VARS2-213ENST00000625423 VPS33AQ96AX1 596 aa11.21□□□□□ -0.61
VARS2-213ENST00000625423 C8orf48Q96LL4 319 aa11.21□□□□□ -0.61
VARS2-213ENST00000625423 TRIM15Q9C019 465 aa11.21□□□□□ -0.61
VARS2-213ENST00000625423 LIN28AQ9H9Z2 209 aaKnown RBP11.21□□□□□ -0.61
VARS2-213ENST00000625423 CLK4Q9HAZ1 481 aaKnown RBP11.21□□□□□ -0.61
VARS2-213ENST00000625423 GID8Q9NWU2 228 aa11.21□□□□□ -0.61
VARS2-213ENST00000625423 MARCH2Q9P0N8 246 aa11.21□□□□□ -0.61
VARS2-213ENST00000625423 TRPM7Q96QT4 1865 aa11.21□□□□□ -0.61
VARS2-213ENST00000625423 NCF1BA6NI72 391 aaPredicted RBP11.21□□□□□ -0.62
VARS2-213ENST00000625423 DRGXA6NNA5 263 aa11.21□□□□□ -0.62
VARS2-213ENST00000625423 NCF1CA8MVU1 366 aaPredicted RBP11.21□□□□□ -0.62
VARS2-213ENST00000625423 DLGAP1O14490 977 aa11.21□□□□□ -0.62
VARS2-213ENST00000625423 MATN4O95460 622 aa11.21□□□□□ -0.62
VARS2-213ENST00000625423 NCF1P14598 390 aaPredicted RBP11.21□□□□□ -0.62
VARS2-213ENST00000625423 IL10P22301 178 aa11.21□□□□□ -0.62
VARS2-213ENST00000625423 OR1G1P47890 313 aa11.21□□□□□ -0.62
VARS2-213ENST00000625423 TSNQ15631 228 aaKnown RBP11.21□□□□□ -0.62
VARS2-213ENST00000625423 TRIP4Q15650 581 aaPredicted RBP11.21□□□□□ -0.62
VARS2-213ENST00000625423 PARP15Q460N3 678 aa11.21□□□□□ -0.62
VARS2-213ENST00000625423 CST9Q5W186 159 aa11.21□□□□□ -0.62
VARS2-213ENST00000625423 BLOC1S3Q6QNY0 202 aa11.21□□□□□ -0.62
VARS2-213ENST00000625423 ZNF598Q86UK7 904 aaKnown RBP11.21□□□□□ -0.62
VARS2-213ENST00000625423 DNAJB14Q8TBM8 379 aa11.21□□□□□ -0.62
VARS2-213ENST00000625423 FBXO32Q969P5 355 aa11.21□□□□□ -0.62
VARS2-213ENST00000625423 CDKN2AIPNLQ96HQ2 116 aa11.21□□□□□ -0.62
VARS2-213ENST00000625423 RPL10LQ96L21 214 aaKnown RBP11.21□□□□□ -0.62
VARS2-213ENST00000625423 TEX37Q96LM6 180 aa11.21□□□□□ -0.62
VARS2-213ENST00000625423 POPDC3Q9HBV1 291 aa11.21□□□□□ -0.62
VARS2-213ENST00000625423 SMOXQ9NWM0 555 aa11.21□□□□□ -0.62
VARS2-213ENST00000625423 MYO16Q9Y6X6 1858 aa11.21□□□□□ -0.62
VARS2-213ENST00000625423 ARPC2O15144 300 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 PRAMEF11O60813 436 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 KERAO60938 352 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 OAZ2O95190 189 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 MYCP01106 439 aaPredicted RBP11.2□□□□□ -0.62
VARS2-213ENST00000625423 MTHFD1P11586 935 aaKnown RBP11.2□□□□□ -0.62
VARS2-213ENST00000625423 CDK4P11802 303 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 HOXB8P17481 243 aaPredicted RBP11.2□□□□□ -0.62
VARS2-213ENST00000625423 OGNP20774 298 aaKnown RBP11.2□□□□□ -0.62
VARS2-213ENST00000625423 PSMA4P25789 261 aaKnown RBP11.2□□□□□ -0.62
VARS2-213ENST00000625423 PRDX3P30048 256 aaKnown RBP11.2□□□□□ -0.62
VARS2-213ENST00000625423 LCP2Q13094 533 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 SETMARQ53H47 684 aaPredicted RBP11.2□□□□□ -0.62
VARS2-213ENST00000625423 SCIMPQ6UWF3 145 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 C17orf99Q6UX52 265 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 CAMK1DQ8IU85 385 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 CMTR2Q8IYT2 770 aaKnown RBP11.2□□□□□ -0.62
VARS2-213ENST00000625423 CFAP52Q8N1V2 620 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 STAG3L4Q8TBR4 150 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 KIAA1191Q96A73 305 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 SLC52A3Q9NQ40 469 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 AGPAT4Q9NRZ5 378 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms