RNA–Protein interactions for RNA: ENST00000622972.3

LINC00963-215, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 444 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-215ENST00000622972 CCDC50Q8IVM0 306 aa5.89□□□□□ -1.47
LINC00963-215ENST00000622972 SYCE1Q8N0S2 351 aa5.89□□□□□ -1.47
LINC00963-215ENST00000622972 ZNF567Q8N184 647 aa5.89□□□□□ -1.47
LINC00963-215ENST00000622972 ATPAF2Q8N5M1 289 aa5.89□□□□□ -1.47
LINC00963-215ENST00000622972 TRIM58Q8NG06 486 aa5.89□□□□□ -1.47
LINC00963-215ENST00000622972 IFI44Q8TCB0 444 aa5.89□□□□□ -1.47
LINC00963-215ENST00000622972 BTN2A2Q8WVV5 523 aa5.89□□□□□ -1.47
LINC00963-215ENST00000622972 C1orf54Q8WWF1 131 aa5.89□□□□□ -1.47
LINC00963-215ENST00000622972 FGF11Q92914 225 aa5.89□□□□□ -1.47
LINC00963-215ENST00000622972 FATE1Q969F0 183 aa5.89□□□□□ -1.47
LINC00963-215ENST00000622972 ISG20Q96AZ6 181 aaKnown RBP5.89□□□□□ -1.47
LINC00963-215ENST00000622972 CRELD1Q96HD1 420 aa5.89□□□□□ -1.47
LINC00963-215ENST00000622972 RBM41Q96IZ5 413 aaKnown RBP5.89□□□□□ -1.47
LINC00963-215ENST00000622972 BMFQ96LC9 184 aa5.89□□□□□ -1.47
LINC00963-215ENST00000622972 PSKH2Q96QS6 385 aa5.89□□□□□ -1.47
LINC00963-215ENST00000622972 OSBPL9Q96SU4 736 aa5.89□□□□□ -1.47
LINC00963-215ENST00000622972 MGME1Q9BQP7 344 aa5.89□□□□□ -1.47
LINC00963-215ENST00000622972 WRAP53Q9BUR4 548 aaKnown RBP5.89□□□□□ -1.47
LINC00963-215ENST00000622972 MLPHQ9BV36 600 aaPredicted RBP5.89□□□□□ -1.47
LINC00963-215ENST00000622972 SLC13A1Q9BZW2 595 aa5.89□□□□□ -1.47
LINC00963-215ENST00000622972 CARD9Q9H257 536 aa5.89□□□□□ -1.47
LINC00963-215ENST00000622972 RETREG1Q9H6L5 497 aa5.89□□□□□ -1.47
LINC00963-215ENST00000622972 DONSONQ9NYP3 566 aa5.89□□□□□ -1.47
LINC00963-215ENST00000622972 SPASTQ9UBP0 616 aa5.89□□□□□ -1.47
LINC00963-215ENST00000622972 UBA2Q9UBT2 640 aaPredicted RBP5.89□□□□□ -1.47
LINC00963-215ENST00000622972 APOBEC3BQ9UH17 382 aaKnown RBP5.89□□□□□ -1.47
LINC00963-215ENST00000622972 DNPEPQ9ULA0 475 aa5.89□□□□□ -1.47
LINC00963-215ENST00000622972 SNX12Q9UMY4 172 aa5.89□□□□□ -1.47
LINC00963-215ENST00000622972 ATP8A1Q9Y2Q0 1164 aa5.89□□□□□ -1.47
LINC00963-215ENST00000622972 NEU2Q9Y3R4 380 aa5.89□□□□□ -1.47
LINC00963-215ENST00000622972 FRYQ5TBA9 3013 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 COL27A1Q8IZC6 1860 aaPredicted RBP5.88□□□□□ -1.47
LINC00963-215ENST00000622972 SPTY2D1-AS1A0A0U1RR47 76 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 TSPAN11A1L157 253 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 ARHGAP42A6NI28 874 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 TRAFD1O14545 582 aaPredicted RBP5.88□□□□□ -1.47
LINC00963-215ENST00000622972 MATN3O15232 486 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 ZSCAN12O43309 604 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 TLX3O43711 291 aaPredicted RBP5.88□□□□□ -1.47
LINC00963-215ENST00000622972 LIASO43766 372 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 FZD6O60353 706 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 CSO75390 466 aaKnown RBP5.88□□□□□ -1.47
LINC00963-215ENST00000622972 METTL18O95568 372 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 JCHAINP01591 159 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 FGGP02679 453 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 CSF2P04141 144 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 PDHA1P08559 390 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 ZSCAN5DPP0CG00 497 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 NFKB1P19838 968 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 RBMS1P29558 406 aaKnown RBP5.88□□□□□ -1.47
LINC00963-215ENST00000622972 KCNJ1P48048 391 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 BLKP51451 505 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 CXADRP78310 365 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 PPARDQ03181 441 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 ELP6Q0PNE2 266 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 RALGDSQ12967 914 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 FGL2Q14314 439 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 FZD2Q14332 565 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 NR0B2Q15466 257 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 IFI16Q16666 785 aaKnown RBP5.88□□□□□ -1.47
LINC00963-215ENST00000622972 SOWAHCQ53LP3 525 aaPredicted RBP5.88□□□□□ -1.47
LINC00963-215ENST00000622972 INO80DQ53TQ3 878 aaPredicted RBP5.88□□□□□ -1.47
LINC00963-215ENST00000622972 PRRT3Q5FWE3 981 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 C3orf38Q5JPI3 329 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 ZFYVE27Q5T4F4 411 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 ESRP1Q6NXG1 681 aaKnown RBP5.88□□□□□ -1.47
LINC00963-215ENST00000622972 ZCCHC8Q6NZY4 707 aaKnown RBP5.88□□□□□ -1.47
LINC00963-215ENST00000622972 ERAP2Q6P179 960 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 KDELC1Q6UW63 502 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 ENPP7Q6UWV6 458 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 SYT10Q6XYQ8 523 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 RFLNAQ6ZTI6 216 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 EFL1Q7Z2Z2 1120 aaKnown RBP5.88□□□□□ -1.47
LINC00963-215ENST00000622972 RD3Q7Z3Z2 195 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 CAMK1DQ8IU85 385 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 KLHDC8BQ8IXV7 354 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 CCDC13Q8IYE1 715 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 PHACTR4Q8IZ21 702 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 RBFAQ8N0V3 343 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 LSMEM2Q8N112 164 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 SLC22A18ASQ8N1D0 253 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 PELI3Q8N2H9 469 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.88□□□□□ -1.47
LINC00963-215ENST00000622972 LZTR1Q8N653 840 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 DCBLD1Q8N8Z6 715 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 LRRN4CLQ8ND94 238 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 ZNF548Q8NEK5 533 aaPredicted RBP5.88□□□□□ -1.47
LINC00963-215ENST00000622972 SPATA22Q8NHS9 363 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 CASKIN2Q8WXE0 1202 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 ANP32BQ92688 251 aaKnown RBP5.88□□□□□ -1.47
LINC00963-215ENST00000622972 ECHDC3Q96DC8 303 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 C16orf45Q96MC5 204 aaPredicted RBP5.88□□□□□ -1.47
LINC00963-215ENST00000622972 FCRL3Q96P31 734 aaPredicted RBP5.88□□□□□ -1.47
LINC00963-215ENST00000622972 LENG8Q96PV6 779 aaPredicted RBP5.88□□□□□ -1.47
LINC00963-215ENST00000622972 TRIB3Q96RU7 358 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 SP110Q9HB58 689 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 NOD2Q9HC29 1040 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 NT5MQ9NPB1 228 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 NCKIPSDQ9NZQ3 722 aa5.88□□□□□ -1.47
LINC00963-215ENST00000622972 GULP1Q9UBP9 304 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms