RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 RXFP1Q9HBX9 757 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 ARL8BQ9NVJ2 186 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 DONSONQ9NYP3 566 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 DEC1Q9P2X7 70 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 ZDHHC2Q9UIJ5 367 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 CA5BQ9Y2D0 317 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 TBC1D30Q9Y2I9 924 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 ARL2BPQ9Y2Y0 163 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 ASB1Q9Y576 335 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 ABCA7Q8IZY2 2146 aa10.49□□□□□ -0.73
VPS11-208ENST00000621676 PRR5-ARHGAP8B1AHC4 643 aa10.49□□□□□ -0.73
VPS11-208ENST00000621676 FFAR2O15552 330 aa10.49□□□□□ -0.73
VPS11-208ENST00000621676 CRTAMO95727 393 aa10.49□□□□□ -0.73
VPS11-208ENST00000621676 CYP17A1P05093 508 aa10.49□□□□□ -0.73
VPS11-208ENST00000621676 LHCGRP22888 699 aa10.49□□□□□ -0.73
VPS11-208ENST00000621676 RPL10P27635 214 aaKnown RBP10.49□□□□□ -0.73
VPS11-208ENST00000621676 PSMD8P48556 350 aa10.49□□□□□ -0.73
VPS11-208ENST00000621676 ARHGAP8P85298 464 aa10.49□□□□□ -0.73
VPS11-208ENST00000621676 TFF2Q03403 129 aa10.49□□□□□ -0.73
VPS11-208ENST00000621676 ABRQ12979 859 aa10.49□□□□□ -0.73
VPS11-208ENST00000621676 ATP13A5Q4VNC0 1218 aa10.49□□□□□ -0.73
VPS11-208ENST00000621676 SLC9B1Q4ZJI4 515 aa10.49□□□□□ -0.73
VPS11-208ENST00000621676 TRIM67Q6ZTA4 783 aa10.49□□□□□ -0.73
VPS11-208ENST00000621676 PTGR2Q8N8N7 351 aaPredicted RBP10.49□□□□□ -0.73
VPS11-208ENST00000621676 OR52B2Q96RD2 323 aa10.49□□□□□ -0.73
VPS11-208ENST00000621676 MYADMQ96S97 322 aa10.49□□□□□ -0.73
VPS11-208ENST00000621676 NAT9Q9BTE0 207 aa10.49□□□□□ -0.73
VPS11-208ENST00000621676 IL26Q9NPH9 171 aa10.49□□□□□ -0.73
VPS11-208ENST00000621676 CD274Q9NZQ7 290 aa10.49□□□□□ -0.73
VPS11-208ENST00000621676 TMEM98Q9Y2Y6 226 aa10.49□□□□□ -0.73
VPS11-208ENST00000621676 K7ESM1 405 aa10.49□□□□□ -0.73
VPS11-208ENST00000621676 AIM2O14862 343 aa10.49□□□□□ -0.73
VPS11-208ENST00000621676 SLC31A1O15431 190 aa10.49□□□□□ -0.73
VPS11-208ENST00000621676 GLRA3O75311 464 aa10.49□□□□□ -0.73
VPS11-208ENST00000621676 IGSF6O95976 241 aa10.49□□□□□ -0.73
VPS11-208ENST00000621676 ADH5P11766 374 aa10.49□□□□□ -0.73
VPS11-208ENST00000621676 SERPINB9P50453 376 aa10.49□□□□□ -0.73
VPS11-208ENST00000621676 C22orf39Q6P5X5 142 aa10.49□□□□□ -0.73
VPS11-208ENST00000621676 SH2D5Q6ZV89 423 aa10.49□□□□□ -0.73
VPS11-208ENST00000621676 SETD3Q86TU7 594 aaPredicted RBP10.49□□□□□ -0.73
VPS11-208ENST00000621676 TDRPQ86YL5 185 aa10.49□□□□□ -0.73
VPS11-208ENST00000621676 BPIFB1Q8TDL5 484 aa10.49□□□□□ -0.73
VPS11-208ENST00000621676 SREK1Q8WXA9 508 aaKnown RBP10.49□□□□□ -0.73
VPS11-208ENST00000621676 TIFAQ96CG3 184 aa10.49□□□□□ -0.73
VPS11-208ENST00000621676 MGME1Q9BQP7 344 aa10.49□□□□□ -0.73
VPS11-208ENST00000621676 SENP1Q9P0U3 644 aa10.49□□□□□ -0.73
VPS11-208ENST00000621676 FNIP2Q9P278 1114 aa10.49□□□□□ -0.73
VPS11-208ENST00000621676 ZNF711Q9Y462 761 aa10.49□□□□□ -0.73
VPS11-208ENST00000621676 L3MBTL1Q9Y468 752 aa10.49□□□□□ -0.73
VPS11-208ENST00000621676 RALGAPA2Q2PPJ7 1873 aa10.49□□□□□ -0.73
VPS11-208ENST00000621676 TIMM44O43615 452 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 TCEA3O75764 348 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 BPIP17213 487 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 SERPINA4P29622 427 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 PREPP48147 710 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 PRKG2Q13237 762 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 MYLK3Q32MK0 819 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 AFMIDQ63HM1 303 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 LRRC8EQ6NSJ5 796 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 FBXL19Q6PCT2 694 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 C4orf22Q6V702 233 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 RNF175Q8N4F7 328 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 PPFIBP2Q8ND30 876 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 LINGO1Q96FE5 620 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 FRMD8Q9BZ67 464 aaPredicted RBP10.48□□□□□ -0.73
VPS11-208ENST00000621676 SUV39H2Q9H5I1 410 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 ATP13A3Q9H7F0 1226 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 ZFP14Q9HCL3 533 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 EIF2B3Q9NR50 452 aaKnown RBP10.48□□□□□ -0.73
VPS11-208ENST00000621676 HEBP1Q9NRV9 189 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.48□□□□□ -0.73
VPS11-208ENST00000621676 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.48□□□□□ -0.73
VPS11-208ENST00000621676 ZNF487B1APH4 448 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 SMAPO00193 183 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 FCHO1O14526 889 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 PRPF4O43172 522 aaKnown RBP eCLIP10.48□□□□□ -0.73
VPS11-208ENST00000621676 RPP40O75818 363 aaKnown RBP10.48□□□□□ -0.73
VPS11-208ENST00000621676 PDE5AO76074 875 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 PAK4O96013 591 aaPredicted RBP10.48□□□□□ -0.73
VPS11-208ENST00000621676 PROCP04070 461 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 FGF1P05230 155 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 FGF3P11487 239 aaPredicted RBP10.48□□□□□ -0.73
VPS11-208ENST00000621676 MAGEA6P43360 314 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 SLC25A3Q00325 362 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 LRRC36Q1X8D7 754 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 FAM83EQ2M2I3 478 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 AAK1Q2M2I8 961 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 GALNTL6Q49A17 601 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 SPDYCQ5MJ68 293 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.48□□□□□ -0.73
VPS11-208ENST00000621676 LSRQ86X29 649 aaPredicted RBP10.48□□□□□ -0.73
VPS11-208ENST00000621676 SCML4Q8N228 414 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 PHTF2Q8N3S3 785 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 TRMT2BQ96GJ1 504 aaKnown RBP10.48□□□□□ -0.73
VPS11-208ENST00000621676 COG4Q9H9E3 785 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 TREX1Q9NSU2 369 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 RNF112Q9ULX5 631 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 RP1L1Q8IWN7 2480 aaPredicted RBP10.48□□□□□ -0.73
VPS11-208ENST00000621676 MAGEB16A2A368 324 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 NDC80O14777 642 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms