RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 GOLGA6DP0CG33 693 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 PRKAR1AP10644 381 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 MYCLP1P12525 358 aaPredicted RBP7.82□□□□□ -1.16
CLK1-215ENST00000621181 CR2P20023 1033 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 GPD1P21695 349 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 MPSTP25325 297 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 AK4P27144 223 aaPredicted RBP7.82□□□□□ -1.16
CLK1-215ENST00000621181 CD1CP29017 333 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 GPR3P46089 330 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 ARSDP51689 593 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 LIMK2P53671 638 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 TPI1P60174 286 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 CDR2Q01850 454 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 TRA2AQ13595 282 aaKnown RBP eCLIP7.82□□□□□ -1.162e-9■■■■□ 22.8
CLK1-215ENST00000621181 PEX6Q13608 980 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 NR1D2Q14995 579 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 DCAF12Q5T6F0 453 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 NKAIN2Q5VXU1 208 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 ADGRD1Q6QNK2 874 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 HDXQ7Z353 690 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 ZNF572Q7Z3I7 529 aaPredicted RBP7.82□□□□□ -1.16
CLK1-215ENST00000621181 ZNF438Q7Z4V0 828 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 HEATR4Q86WZ0 1026 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 NRSN1Q8IZ57 195 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 PATE1Q8WXA2 126 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 KIAA1143Q96AT1 154 aaPredicted RBP7.82□□□□□ -1.16
CLK1-215ENST00000621181 NUS1Q96E22 293 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 CELF6Q96J87 481 aaKnown RBP7.82□□□□□ -1.16
CLK1-215ENST00000621181 DDA1Q9BW61 102 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 CINPQ9BW66 212 aaPredicted RBP7.82□□□□□ -1.16
CLK1-215ENST00000621181 CDH19Q9H159 772 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 NHEJ1Q9H9Q4 299 aaPredicted RBP7.82□□□□□ -1.16
CLK1-215ENST00000621181 GPN2Q9H9Y4 310 aaPredicted RBP7.82□□□□□ -1.16
CLK1-215ENST00000621181 PDFQ9HBH1 243 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 PHPT1Q9NRX4 125 aaPredicted RBP7.82□□□□□ -1.16
CLK1-215ENST00000621181 SLC39A1Q9NY26 324 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 GOLGA6AQ9NYA3 693 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 KCNK4Q9NYG8 393 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 ADAM22Q9P0K1 906 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 NOCTQ9UK39 431 aaKnown RBP7.82□□□□□ -1.16
CLK1-215ENST00000621181 GUCA1BQ9UMX6 200 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 ARHGAP42A6NI28 874 aa7.81□□□□□ -1.16
CLK1-215ENST00000621181 EFCAB7A8K855 629 aa7.81□□□□□ -1.16
CLK1-215ENST00000621181 WASH4PA8MWX3 477 aa7.81□□□□□ -1.16
CLK1-215ENST00000621181 EPHB6O15197 1021 aa7.81□□□□□ -1.16
CLK1-215ENST00000621181 CAPN5O15484 640 aaPredicted RBP7.81□□□□□ -1.16
CLK1-215ENST00000621181 RAD1O60671 282 aa7.81□□□□□ -1.16
CLK1-215ENST00000621181 PRAMEF11O60813 436 aa7.81□□□□□ -1.16
CLK1-215ENST00000621181 DESP17661 470 aa7.81□□□□□ -1.16
CLK1-215ENST00000621181 GNPDA1P46926 289 aa7.81□□□□□ -1.16
CLK1-215ENST00000621181 RGRP47804 291 aa7.81□□□□□ -1.16
CLK1-215ENST00000621181 SCNN1BP51168 640 aa7.81□□□□□ -1.16
CLK1-215ENST00000621181 RAB15P59190 212 aa7.81□□□□□ -1.16
CLK1-215ENST00000621181 FMO1Q01740 532 aa7.81□□□□□ -1.16
CLK1-215ENST00000621181 ASTE1Q2TB18 679 aaPredicted RBP7.81□□□□□ -1.16
CLK1-215ENST00000621181 DENND2CQ68D51 928 aa7.81□□□□□ -1.16
CLK1-215ENST00000621181 TRIM72Q6ZMU5 477 aa7.81□□□□□ -1.16
CLK1-215ENST00000621181 DPPA4Q7L190 304 aa7.81□□□□□ -1.16
CLK1-215ENST00000621181 SRLQ86TD4 932 aa7.81□□□□□ -1.16
CLK1-215ENST00000621181 C17orf82Q86X59 251 aaPredicted RBP7.81□□□□□ -1.16
CLK1-215ENST00000621181 PELI3Q8N2H9 469 aa7.81□□□□□ -1.16
CLK1-215ENST00000621181 FAM26EQ8N5C1 309 aa7.81□□□□□ -1.16
CLK1-215ENST00000621181 C3orf20Q8ND61 904 aa7.81□□□□□ -1.16
CLK1-215ENST00000621181 ECHDC3Q96DC8 303 aa7.81□□□□□ -1.16
CLK1-215ENST00000621181 AHCYL2Q96HN2 611 aaKnown RBP7.81□□□□□ -1.16
CLK1-215ENST00000621181 LRRC19Q9H756 370 aa7.81□□□□□ -1.16
CLK1-215ENST00000621181 NPDC1Q9NQX5 325 aaPredicted RBP7.81□□□□□ -1.16
CLK1-215ENST00000621181 TRNAU1APQ9NX07 287 aaKnown RBP7.81□□□□□ -1.16
CLK1-215ENST00000621181 FZD10Q9ULW2 581 aa7.81□□□□□ -1.16
CLK1-215ENST00000621181 SUFUQ9UMX1 484 aa7.81□□□□□ -1.16
CLK1-215ENST00000621181 IGHV1OR21-1A0A087WYE8 117 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 POLR3GO15318 223 aaPredicted RBP7.8□□□□□ -1.16
CLK1-215ENST00000621181 CALB1P05937 261 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 CEACAM5P06731 702 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 RHOXF2BP0C7M4 288 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 THRAP10827 490 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 CSF2RBP32927 897 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 CYLC1P35663 651 aaPredicted RBP7.8□□□□□ -1.16
CLK1-215ENST00000621181 NOP2P46087 812 aaKnown RBP7.8□□□□□ -1.16
CLK1-215ENST00000621181 CSNK1DP48730 415 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 PAPOLAP51003 745 aaKnown RBP7.8□□□□□ -1.16
CLK1-215ENST00000621181 VAV2P52735 878 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 ZNF143P52747 638 aaPredicted RBP7.8□□□□□ -1.16
CLK1-215ENST00000621181 NDST2P52849 883 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 AIF1P55008 147 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 GSCP56915 257 aaPredicted RBP7.8□□□□□ -1.16
CLK1-215ENST00000621181 GPLD1P80108 840 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 CDK3Q00526 305 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 SEPT6Q14141 434 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 CCDC122Q5T0U0 273 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 AFMIDQ63HM1 303 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 ANKS6Q68DC2 871 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 KDELC2Q7Z4H8 507 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 NRROSQ86YC3 692 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 NLGN4XQ8N0W4 816 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 NAGSQ8N159 534 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 NLGN4YQ8NFZ3 816 aaPredicted RBP7.8□□□□□ -1.16
CLK1-215ENST00000621181 PDCD6IPQ8WUM4 868 aaKnown RBP7.8□□□□□ -1.16
CLK1-215ENST00000621181 APOBEC4Q8WW27 367 aaKnown RBP7.8□□□□□ -1.16
CLK1-215ENST00000621181 SLC45A3Q96JT2 553 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms