RNA–Protein interactions for RNA: ENST00000621150.3

TNFAIP3-211, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-211ENST00000621150 NLE1Q9NVX2 485 aaPredicted RBP12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 OBP2AQ9NY56 170 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 WNT6Q9Y6F9 365 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 NEDD8-MDP1E9PL57 170 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 HOXC11O43248 304 aaPredicted RBP12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 PLIN3O60664 434 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 EDF1O60869 148 aaKnown RBP12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 SOCS5O75159 536 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 RPP40O75818 363 aaKnown RBP12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 PGLSO95336 258 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 WISP3O95389 354 aaPredicted RBP12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 IL1BP01584 269 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 LMNAP02545 664 aaKnown RBP12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 MPOP05164 745 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 C2P06681 752 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 GSTA1P08263 222 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 PIRTP0C851 137 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 PABPC1P11940 636 aaKnown RBP12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 TYK2P29597 1187 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 GMPRP36959 345 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 RPL26P61254 145 aaKnown RBP12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 PDE1BQ01064 536 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 FOXK2Q01167 660 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 CSTF1Q05048 431 aaKnown RBP12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 MTAPQ13126 283 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 THOC5Q13769 683 aaKnown RBP12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 DLG2Q15700 870 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 DBN1Q16643 649 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 ZNF789Q5FWF6 425 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 TMEM215Q68D42 235 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 CPLX4Q7Z7G2 160 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 TAX1BP1Q86VP1 789 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 OR13C4Q8NGS5 318 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 CSGALNACT1Q8TDX6 532 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 SEC16BQ96JE7 1060 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 ZFYVE19Q96K21 471 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 CABS1Q96KC9 395 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 TBATAQ96M53 351 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 PAIP2Q9BPZ3 127 aaKnown RBP12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 SLC2A11Q9BYW1 496 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 TM6SF2Q9BZW4 377 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 C12orf49Q9H741 205 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 SLCO1B3Q9NPD5 702 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 MARCH4Q9P2E8 410 aaPredicted RBP12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 DCDC2Q9UHG0 476 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 RPL26L1Q9UNX3 145 aaKnown RBP12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 CCDC162PA2VCL2 907 aa12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 CCL22O00626 93 aa12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 SLC9A3R1O14745 358 aaPredicted RBP12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 HAUS5O94927 633 aa12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 S1PR4O95977 384 aa12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 PROCP04070 461 aa12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 CYP17A1P05093 508 aa12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 CISD3P0C7P0 127 aa12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 SOX9P48436 509 aa12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 CD151P48509 253 aa12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 STK19P49842 368 aaPredicted RBP12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 HNRNPH2P55795 449 aaKnown RBP12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 PTPRCAPQ14761 206 aa12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 DHCR24Q15392 516 aa12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 CDKN3Q16667 212 aa12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 TYSND1Q2T9J0 566 aa12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 GAB4Q2WGN9 574 aa12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 GKAP1Q5VSY0 366 aaPredicted RBP12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 CES4AQ5XG92 561 aa12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 PLD6Q8N2A8 252 aaKnown RBP12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 TMEM151AQ8N4L1 468 aa12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 LPCAT1Q8NF37 534 aa12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 OR2AP1Q8NGE2 309 aa12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 BPIFB1Q8TDL5 484 aa12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 OSCP1Q8WVF1 389 aa12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 ECHDC3Q96DC8 303 aa12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 ATXN7L3BQ96GX2 97 aa12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 CDKN2AIPNLQ96HQ2 116 aa12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 C19orf43Q9BQ61 176 aa12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 ADGRE3Q9BY15 652 aa12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 CEP44Q9C0F1 390 aa12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 NSRP1Q9H0G5 558 aaKnown RBP12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 CHRDQ9H2X0 955 aa12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 CAB39LQ9H9S4 337 aa12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 LMAN1LQ9HAT1 526 aa12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 GTSE1Q9NYZ3 720 aa12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 MYOFQ9NZM1 2061 aa12.39□□□□□ -0.43
TNFAIP3-211ENST00000621150 A0A096LPK6 155 aa12.38□□□□□ -0.43
TNFAIP3-211ENST00000621150 OR51F1A6NGY5 319 aa12.38□□□□□ -0.43
TNFAIP3-211ENST00000621150 H7C0S8 307 aa12.38□□□□□ -0.43
TNFAIP3-211ENST00000621150 BIRC5O15392 142 aa12.38□□□□□ -0.43
TNFAIP3-211ENST00000621150 CRTAMO95727 393 aa12.38□□□□□ -0.43
TNFAIP3-211ENST00000621150 GOT2P00505 430 aaKnown RBP12.38□□□□□ -0.43
TNFAIP3-211ENST00000621150 BPGMP07738 259 aa12.38□□□□□ -0.43
TNFAIP3-211ENST00000621150 SLC35E2BP0CK96 405 aa12.38□□□□□ -0.43
TNFAIP3-211ENST00000621150 CHRNB1P11230 501 aa12.38□□□□□ -0.43
TNFAIP3-211ENST00000621150 SLC8A1P32418 973 aa12.38□□□□□ -0.43
TNFAIP3-211ENST00000621150 GRIA4P48058 902 aa12.38□□□□□ -0.43
TNFAIP3-211ENST00000621150 SEMA3AQ14563 771 aa12.38□□□□□ -0.43
TNFAIP3-211ENST00000621150 N4BP2L1Q5TBK1 243 aaPredicted RBP12.38□□□□□ -0.43
TNFAIP3-211ENST00000621150 C22orf39Q6P5X5 142 aa12.38□□□□□ -0.43
TNFAIP3-211ENST00000621150 CNSTQ6PJW8 725 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms