RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 CDKN1CP49918 316 aaPredicted RBP4.31□□□□□ -1.72
SEC22B-202ENST00000618538 SUOXP51687 545 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 RPS6KA3P51812 740 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 DIO3P55073 304 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 CDH15P55291 814 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 TXNL4AP83876 142 aaKnown RBP4.31□□□□□ -1.72
SEC22B-202ENST00000618538 NFKB2Q00653 900 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 TNK2Q07912 1038 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 GALNT1Q10472 559 aaPredicted RBP4.31□□□□□ -1.72
SEC22B-202ENST00000618538 TUSC3Q13454 348 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 BIRC2Q13490 618 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 GALNT3Q14435 633 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 CAPRIN1Q14444 709 aaKnown RBP4.31□□□□□ -1.72
SEC22B-202ENST00000618538 MBTPS1Q14703 1052 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 POLD3Q15054 466 aaPredicted RBP4.31□□□□□ -1.72
SEC22B-202ENST00000618538 ACAP2Q15057 778 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 FAM83EQ2M2I3 478 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 TRIM71Q2Q1W2 868 aaKnown RBP4.31□□□□□ -1.72
SEC22B-202ENST00000618538 PYCR3Q53H96 274 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 NHSL2Q5HYW2 709 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 GNASQ5JWF2 1037 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 CLLU1OSQ5K130 101 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 RNFT1Q5M7Z0 435 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 AGAP9Q5VTM2 703 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 KANK2Q63ZY3 851 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 RAP1GAP2Q684P5 730 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 FAM45BPQ6NSW5 357 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 TIGD7Q6NT04 549 aaPredicted RBP4.31□□□□□ -1.72
SEC22B-202ENST00000618538 FBXL22Q6P050 247 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 MSANTD2Q6P1R3 559 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 LYPD4Q6UWN0 246 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 C17orf99Q6UX52 265 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 GALNT7Q86SF2 657 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 SCN4BQ8IWT1 228 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 CPNE9Q8IYJ1 553 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 LZTR1Q8N653 840 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 PTGR2Q8N8N7 351 aaPredicted RBP4.31□□□□□ -1.72
SEC22B-202ENST00000618538 ATAD1Q8NBU5 361 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 FAM45AQ8TCE6 357 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 CANT1Q8WVQ1 401 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 TRIB2Q92519 343 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 C19orf60Q96EN9 201 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 MPP4Q96JB8 637 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 TRIB3Q96RU7 358 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 ATOH8Q96SQ7 321 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 ADAM2Q99965 735 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 KATNAL1Q9BW62 490 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 MRPL1Q9BYD6 325 aaKnown RBP4.31□□□□□ -1.72
SEC22B-202ENST00000618538 ARHGAP39Q9C0H5 1083 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 MUC3BQ9H195 1237 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 NOL11Q9H8H0 719 aaKnown RBP4.31□□□□□ -1.72
SEC22B-202ENST00000618538 AKTIPQ9H8T0 292 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 IL1RL2Q9HB29 575 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 PDFQ9HBH1 243 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 SPAG4Q9NPE6 437 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 RGS18Q9NS28 235 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 TMEM248Q9NWD8 314 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 CMTM6Q9NX76 183 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 ABI2Q9NYB9 513 aaPredicted RBP4.31□□□□□ -1.72
SEC22B-202ENST00000618538 EPS15L1Q9UBC2 864 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 BTRCQ9Y297 605 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 VWA7Q9Y334 891 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 Q9Y3F1 56 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 CEPT1Q9Y6K0 416 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 ANKRD36A6QL64 1941 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 GBF1Q92538 1859 aa4.31□□□□□ -1.72
SEC22B-202ENST00000618538 A0A0D9SEW6 157 aa4.3□□□□□ -1.72
SEC22B-202ENST00000618538 A0A0J9YYE9 177 aa4.3□□□□□ -1.72
SEC22B-202ENST00000618538 PDLIM1O00151 329 aa4.3□□□□□ -1.72
SEC22B-202ENST00000618538 NR5A2O00482 541 aa4.3□□□□□ -1.72
SEC22B-202ENST00000618538 GPR39O43194 453 aa4.3□□□□□ -1.72
SEC22B-202ENST00000618538 HTRA2O43464 458 aaPredicted RBP4.3□□□□□ -1.72
SEC22B-202ENST00000618538 NRP2O60462 931 aa4.3□□□□□ -1.72
SEC22B-202ENST00000618538 ADAMTS4O75173 837 aa4.3□□□□□ -1.72
SEC22B-202ENST00000618538 DUSP11O75319 330 aaKnown RBP4.3□□□□□ -1.72
SEC22B-202ENST00000618538 CELF2O95319 508 aaKnown RBP4.3□□□□□ -1.72
SEC22B-202ENST00000618538 PAPSS2O95340 614 aaPredicted RBP4.3□□□□□ -1.72
SEC22B-202ENST00000618538 TNFAIP8O95379 198 aa4.3□□□□□ -1.72
SEC22B-202ENST00000618538 ASLP04424 464 aa4.3□□□□□ -1.72
SEC22B-202ENST00000618538 ITGB2P05107 769 aa4.3□□□□□ -1.72
SEC22B-202ENST00000618538 SNRPB2P08579 225 aaKnown RBP4.3□□□□□ -1.72
SEC22B-202ENST00000618538 FAM58BPP0C7Q3 252 aa4.3□□□□□ -1.72
SEC22B-202ENST00000618538 RHOQP17081 205 aa4.3□□□□□ -1.72
SEC22B-202ENST00000618538 PAMP19021 973 aa4.3□□□□□ -1.72
SEC22B-202ENST00000618538 CDH2P19022 906 aaPredicted RBP4.3□□□□□ -1.72
SEC22B-202ENST00000618538 CES1P23141 567 aa4.3□□□□□ -1.72
SEC22B-202ENST00000618538 SLC6A2P23975 617 aa4.3□□□□□ -1.72
SEC22B-202ENST00000618538 HOXD9P28356 352 aaPredicted RBP4.3□□□□□ -1.72
SEC22B-202ENST00000618538 HTR7P34969 479 aa4.3□□□□□ -1.72
SEC22B-202ENST00000618538 THPOP40225 353 aa4.3□□□□□ -1.72
SEC22B-202ENST00000618538 AGTR2P50052 363 aa4.3□□□□□ -1.72
SEC22B-202ENST00000618538 NDST2P52849 883 aa4.3□□□□□ -1.72
SEC22B-202ENST00000618538 SLC12A2P55011 1212 aa4.3□□□□□ -1.72
SEC22B-202ENST00000618538 HERVK_113P63132 956 aa4.3□□□□□ -1.72
SEC22B-202ENST00000618538 YWHAHQ04917 246 aaPredicted RBP4.3□□□□□ -1.72
SEC22B-202ENST00000618538 DSC1Q08554 894 aa4.3□□□□□ -1.72
SEC22B-202ENST00000618538 ITKQ08881 620 aa4.3□□□□□ -1.72
SEC22B-202ENST00000618538 EFEMP1Q12805 493 aa4.3□□□□□ -1.72
SEC22B-202ENST00000618538 SKIV2LQ15477 1246 aaKnown RBP4.3□□□□□ -1.72
SEC22B-202ENST00000618538 VPS26BQ4G0F5 336 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms