RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 ENPEPQ07075 957 aa11.14□□□□□ -0.63
CCDC144B-208ENST00000618081 ATAT1Q5SQI0 421 aa11.14□□□□□ -0.63
CCDC144B-208ENST00000618081 SPESP1Q6UW49 350 aa11.14□□□□□ -0.63
CCDC144B-208ENST00000618081 ADCY4Q8NFM4 1077 aa11.14□□□□□ -0.63
CCDC144B-208ENST00000618081 PCBD2Q9H0N5 130 aa11.14□□□□□ -0.63
CCDC144B-208ENST00000618081 L1RE1Q9UN81 338 aa11.14□□□□□ -0.63
CCDC144B-208ENST00000618081 CCDC88CQ9P219 2028 aa11.14□□□□□ -0.63
CCDC144B-208ENST00000618081 SDK1Q7Z5N4 2213 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 AZIN1O14977 448 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 UGT2B11O75310 529 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 FCHO2Q0JRZ9 810 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 ZNF155Q12901 538 aaPredicted RBP11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 DLG1Q12959 904 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 SULT1C3Q6IMI6 304 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 MCMBPQ9BTE3 642 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 TNKS2Q9H2K2 1166 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 LRRC72A6NJI9 287 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 RHPN2P1A8MT19 583 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 MAFO75444 373 aaPredicted RBP11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 PAGE1O75459 146 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 C1RP00736 705 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 STXBP1P61764 594 aaKnown RBP11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 ELMO3Q96BJ8 720 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 FCRL4Q96PJ5 515 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 FAM105AQ9NUU6 356 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 RSL24D1Q9UHA3 163 aaKnown RBP11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 FPGTO14772 594 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 PSIP1O75475 530 aaKnown RBP11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 PSMG1O95456 288 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 ITGA2BP08514 1039 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 DDX6P26196 483 aaKnown RBP eCLIP11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 PPP3R1P63098 170 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 IFI35P80217 286 aaPredicted RBP11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 DUSP4Q13115 394 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 SWI5Q1ZZU3 235 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 C1orf186Q6ZWK4 172 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 PIGKQ92643 395 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 PGM2Q96G03 612 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 WDR12Q9GZL7 423 aaKnown RBP11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 DNAJC11Q9NVH1 559 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 C5orf60A6NFR6 353 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 DDX3XO00571 662 aaKnown RBP eCLIP11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 PPP2R2BQ00005 443 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 HDAC7Q8WUI4 952 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 EXOC2Q96KP1 924 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 TRMOQ9BU70 441 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 CST11Q9H112 138 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 MUC13Q9H3R2 512 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 MAGEL2Q9UJ55 1249 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 ZNF490Q9ULM2 529 aaPredicted RBP11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 LOC110117498-PIK3R3F6TDL0 507 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 CBX6O95503 412 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 PRNPP04156 253 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 GLRA2P23416 452 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 VARSP26640 1264 aaKnown RBP11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 TNFRSF8P28908 595 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 OR1D2P34982 312 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 GLUD2P49448 558 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 ADGRA1Q86SQ6 560 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 EPS8L1Q8TE68 723 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 PIK3R3Q92569 461 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 JSRP1Q96MG2 331 aaPredicted RBP11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 CHID1Q9BWS9 393 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 POLR3HQ9Y535 204 aaPredicted RBP11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 SCAMP3O14828 347 aaKnown RBP11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 PLIN3O60664 434 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 RLN1P04808 185 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 HTR7P34969 479 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 PSME3P61289 254 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 PIGZQ86VD9 579 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 RANBP3LQ86VV4 465 aaPredicted RBP11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 MBOAT7Q96N66 472 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 CNTNAP1P78357 1384 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 PLK4O00444 970 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 MDM4O15151 490 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 GTF2BQ00403 316 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 FRRS1Q6ZNA5 592 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 SAPCD2Q86UD0 394 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 ALKBH4Q9NXW9 302 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 BTRCQ9Y297 605 aa11.13□□□□□ -0.63
CCDC144B-208ENST00000618081 CDK5RAP2Q96SN8 1893 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 SMIM35A0A1B0GVV1 85 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 TRIM38O00635 465 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 CASKO14936 926 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 CCL16O15467 120 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 LAMP2P13473 410 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 TAL1P17542 331 aaPredicted RBP11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 RASGEF1BQ0VAM2 473 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 FBXW8Q8N3Y1 598 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 OR14C36Q8NHC7 312 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 ZNF483Q8TF39 744 aaPredicted RBP11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 HIST1H2AAQ96QV6 131 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 SLC38A3Q99624 504 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 PNPLA3Q9NST1 481 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 MEGF6O75095 1541 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 AVPR1BP47901 424 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 MAPK10P53779 464 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 PPIGQ13427 754 aaKnown RBP eCLIP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms