RNA–Protein interactions for RNA: ENST00000616253.1

AL353770.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL353770.3, Length 1,988 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353770.3-201ENST00000616253 COL4A3Q01955 1670 aa9.97□□□□□ -0.81
AL353770.3-201ENST00000616253 NEMP2A6NFY4 417 aa9.97□□□□□ -0.81
AL353770.3-201ENST00000616253 HEPACAM2A8MVW5 462 aa9.97□□□□□ -0.81
AL353770.3-201ENST00000616253 TTC34A8MYJ7 566 aa9.97□□□□□ -0.81
AL353770.3-201ENST00000616253 GAPDHSO14556 408 aaPredicted RBP9.97□□□□□ -0.81
AL353770.3-201ENST00000616253 CHRNGP07510 517 aa9.97□□□□□ -0.81
AL353770.3-201ENST00000616253 RBP1P09455 135 aa9.97□□□□□ -0.81
AL353770.3-201ENST00000616253 CISD3P0C7P0 127 aa9.97□□□□□ -0.81
AL353770.3-201ENST00000616253 ATP5F1P24539 256 aaPredicted RBP9.97□□□□□ -0.81
AL353770.3-201ENST00000616253 CCR10P46092 362 aa9.97□□□□□ -0.81
AL353770.3-201ENST00000616253 NAGLUP54802 743 aa9.97□□□□□ -0.81
AL353770.3-201ENST00000616253 NCALDP61601 193 aa9.97□□□□□ -0.81
AL353770.3-201ENST00000616253 PFKPQ01813 784 aa9.97□□□□□ -0.81
AL353770.3-201ENST00000616253 ASPHQ12797 758 aa9.97□□□□□ -0.81
AL353770.3-201ENST00000616253 RCN2Q14257 317 aa9.97□□□□□ -0.81
AL353770.3-201ENST00000616253 CTSL3PQ5NE16 218 aa9.97□□□□□ -0.81
AL353770.3-201ENST00000616253 USP45Q70EL2 814 aa9.97□□□□□ -0.81
AL353770.3-201ENST00000616253 CLNKQ7Z7G1 428 aa9.97□□□□□ -0.81
AL353770.3-201ENST00000616253 ZNF781Q8N8C0 355 aa9.97□□□□□ -0.81
AL353770.3-201ENST00000616253 WFIKKN2Q8TEU8 576 aa9.97□□□□□ -0.81
AL353770.3-201ENST00000616253 FRS2Q8WU20 508 aa9.97□□□□□ -0.81
AL353770.3-201ENST00000616253 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.97□□□□□ -0.81
AL353770.3-201ENST00000616253 MRPL38Q96DV4 380 aaKnown RBP9.97□□□□□ -0.81
AL353770.3-201ENST00000616253 ZNF641Q96N77 438 aaPredicted RBP9.97□□□□□ -0.81
AL353770.3-201ENST00000616253 LYSMD1Q96S90 227 aa9.97□□□□□ -0.81
AL353770.3-201ENST00000616253 EBF3Q9H4W6 596 aa9.97□□□□□ -0.81
AL353770.3-201ENST00000616253 ALG9Q9H6U8 611 aa9.97□□□□□ -0.81
AL353770.3-201ENST00000616253 TAS2R13Q9NYV9 303 aa9.97□□□□□ -0.81
AL353770.3-201ENST00000616253 FAM50BQ9Y247 325 aa9.97□□□□□ -0.81
AL353770.3-201ENST00000616253 MED16Q9Y2X0 877 aa9.97□□□□□ -0.81
AL353770.3-201ENST00000616253 KIAA1549LQ6ZVL6 1849 aa9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 WASH3PC4AMC7 463 aa9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 LINC01565O15544 149 aa9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 ZBTB14O43829 449 aa9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 TULP3O75386 442 aa9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 DNAJC8O75937 253 aaPredicted RBP9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 NFATC1O95644 943 aa9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 PKMP14618 531 aaKnown RBP9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 CD1DP15813 335 aa9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 BPIP17213 487 aa9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 ITGALP20701 1170 aa9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 KCNA5P22460 613 aa9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 NNMTP40261 264 aa9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 PTGER3P43115 390 aa9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 LRRC73Q5JTD7 316 aa9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 LRRC66Q68CR7 880 aa9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 CRTC1Q6UUV9 634 aa9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 GDPD4Q6W3E5 623 aa9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 TPRG1Q6ZUI0 275 aa9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 MAVSQ7Z434 540 aa9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 GPR149Q86SP6 731 aa9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 TTC7BQ86TV6 843 aa9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 PLPP6Q8IY26 295 aa9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 C10orf67Q8IYJ2 551 aa9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 STK40Q8N2I9 435 aa9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 MICALL1Q8N3F8 863 aa9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 CCNYL1Q8N7R7 359 aa9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 PPP2R3CQ969Q6 453 aa9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 PTERQ96BW5 349 aa9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 SCRN2Q96FV2 425 aa9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 PRR11Q96HE9 360 aaPredicted RBP9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 KLHL32Q96NJ5 620 aa9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 MCCC1Q96RQ3 725 aaPredicted RBP9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 GPR21Q99679 349 aa9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 EBF4Q9BQW3 602 aa9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 DRC3Q9H069 523 aa9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 CYP4F12Q9HCS2 524 aa9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 IL26Q9NPH9 171 aa9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 TXLNGQ9NUQ3 528 aa9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 GDE1Q9NZC3 331 aa9.96□□□□□ -0.81
AL353770.3-201ENST00000616253 PLXNB3Q9ULL4 1909 aa9.96□□□□□ -0.82
AL353770.3-201ENST00000616253 GLYATL1P3A0A0U1RQE8 302 aa9.95□□□□□ -0.82
AL353770.3-201ENST00000616253 OTOL1A6NHN0 477 aaPredicted RBP9.95□□□□□ -0.82
AL353770.3-201ENST00000616253 A8MT66 165 aa9.95□□□□□ -0.82
AL353770.3-201ENST00000616253 H3BMM5 538 aa9.95□□□□□ -0.82
AL353770.3-201ENST00000616253 FCHO1O14526 889 aa9.95□□□□□ -0.82
AL353770.3-201ENST00000616253 NIPSNAP2O75323 286 aa9.95□□□□□ -0.82
AL353770.3-201ENST00000616253 VPS26AO75436 327 aa9.95□□□□□ -0.82
AL353770.3-201ENST00000616253 CBX6O95503 412 aa9.95□□□□□ -0.82
AL353770.3-201ENST00000616253 ATP5BP06576 529 aaKnown RBP9.95□□□□□ -0.82
AL353770.3-201ENST00000616253 LHCGRP22888 699 aa9.95□□□□□ -0.82
AL353770.3-201ENST00000616253 FCARP24071 287 aa9.95□□□□□ -0.82
AL353770.3-201ENST00000616253 MPSTP25325 297 aa9.95□□□□□ -0.82
AL353770.3-201ENST00000616253 TARSP26639 723 aaKnown RBP9.95□□□□□ -0.82
AL353770.3-201ENST00000616253 CA5AP35218 305 aa9.95□□□□□ -0.82
AL353770.3-201ENST00000616253 SPAM1P38567 509 aa9.95□□□□□ -0.82
AL353770.3-201ENST00000616253 MAGEA9P43362 315 aa9.95□□□□□ -0.82
AL353770.3-201ENST00000616253 DNAJB13P59910 316 aa9.95□□□□□ -0.82
AL353770.3-201ENST00000616253 MESP2Q0VG99 397 aa9.95□□□□□ -0.82
AL353770.3-201ENST00000616253 NFATC2Q13469 925 aa9.95□□□□□ -0.82
AL353770.3-201ENST00000616253 SETMARQ53H47 684 aaPredicted RBP9.95□□□□□ -0.82
AL353770.3-201ENST00000616253 ARL13AQ5H913 290 aaPredicted RBP9.95□□□□□ -0.82
AL353770.3-201ENST00000616253 SPDYAQ5MJ70 313 aa9.95□□□□□ -0.82
AL353770.3-201ENST00000616253 GRAMD4Q6IC98 578 aa9.95□□□□□ -0.82
AL353770.3-201ENST00000616253 PAQR3Q6TCH7 311 aa9.95□□□□□ -0.82
AL353770.3-201ENST00000616253 TRIM67Q6ZTA4 783 aa9.95□□□□□ -0.82
AL353770.3-201ENST00000616253 SNX20Q7Z614 316 aa9.95□□□□□ -0.82
AL353770.3-201ENST00000616253 ISCA2Q86U28 154 aa9.95□□□□□ -0.82
AL353770.3-201ENST00000616253 SERPINA9Q86WD7 417 aa9.95□□□□□ -0.82
AL353770.3-201ENST00000616253 ETFBKMTQ8IXQ9 262 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms