RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 SPDYAQ5MJ70 313 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 PPP2R2DQ66LE6 453 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 LRRC66Q68CR7 880 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 ALG1LQ6GMV1 187 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 PTRHD1Q6GMV3 140 aaKnown RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 KLC3Q6P597 504 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 C22orf39Q6P5X5 142 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 CYB5D1Q6P9G0 228 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 KIAA0408Q6ZU52 694 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 SERPINA9Q86WD7 417 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 LSMEM2Q8N112 164 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 TTC30BQ8N4P2 665 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 VN1R2Q8NFZ6 395 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 GABPB2Q8TAK5 448 aaPredicted RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 EEF1AKMT1Q8WVE0 214 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 SKA2Q8WVK7 121 aaPredicted RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 SREK1Q8WXA9 508 aaKnown RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 SCG3Q8WXD2 468 aaKnown RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 ISL2Q96A47 359 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 SLC7A6OSQ96CW6 309 aaPredicted RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 AARSD1Q9BTE6 412 aaKnown RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 TBC1D10AQ9BXI6 508 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 WWP1Q9H0M0 922 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 SUV39H2Q9H5I1 410 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 ATP13A3Q9H7F0 1226 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 IL26Q9NPH9 171 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 TMEM51Q9NW97 253 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 KCNK4Q9NYG8 393 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 IL17CQ9P0M4 197 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 GIMAP2Q9UG22 337 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 CIDEBQ9UHD4 219 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 MBD1Q9UIS9 605 aaPredicted RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 SLC25A13Q9UJS0 675 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 ITM2BQ9Y287 266 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 ARIH1Q9Y4X5 557 aaPredicted RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 PRSS21Q9Y6M0 314 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 A0A0J9YYE9 177 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 A0A1B0GTL3 188 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 TARM1B6A8C7 271 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 C9JVG2 144 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 KPNA3O00505 521 aaPredicted RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 TRAFD1O14545 582 aaPredicted RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 GYG2O15488 501 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 FZD6O60353 706 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 SIN3BO75182 1162 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 LEFTY1O75610 366 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 TGDSO95455 350 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 TRBC1P01850 177 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 BPIP17213 487 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 SERPINA4P29622 427 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 HNRNPH1P31943 449 aaKnown RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 AGTR2P50052 363 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 RPL14P50914 215 aaKnown RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 SNRPD1P62314 119 aaKnown RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 SLC25A3Q00325 362 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 PFKPQ01813 784 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 FRG1Q14331 258 aaKnown RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 CTC1Q2NKJ3 1217 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 SETMARQ53H47 684 aaPredicted RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 TECRLQ5HYJ1 363 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 FAM78AQ5JUQ0 283 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 FAM45BPQ6NSW5 357 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 AFTPHQ6ULP2 937 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 CRTC1Q6UUV9 634 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 ADIPOR2Q86V24 386 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 CPXM2Q8N436 756 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 PTGR2Q8N8N7 351 aaPredicted RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 GBP7Q8N8V2 638 aaPredicted RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 GPR26Q8NDV2 337 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 PHOSPHO2Q8TCD6 241 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 FAM45AQ8TCE6 357 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 LKAAEAR1Q8TD35 194 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 TRPC4APQ8TEL6 797 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 LPGAT1Q92604 370 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 FGF13Q92913 245 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 UTP4Q969X6 686 aaKnown RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 PBXIP1Q96AQ6 731 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 SKA1Q96BD8 255 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 TSPAN17Q96FV3 270 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 NSL1Q96IY1 281 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 SLC45A3Q96JT2 553 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 BIRC8Q96P09 236 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 CATSPER2Q96P56 530 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 KCNA7Q96RP8 456 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 HBEGFQ99075 208 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 MIPEPQ99797 713 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 MRPL57Q9BQC6 102 aaKnown RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 CDH19Q9H159 772 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 SLC28A3Q9HAS3 691 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 CD248Q9HCU0 757 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 SEMA4BQ9NPR2 832 aaPredicted RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 KLC4Q9NSK0 619 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 TXLNGQ9NUQ3 528 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 TAS2R13Q9NYV9 303 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 CRLS1Q9UJA2 301 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 RNF112Q9ULX5 631 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 ANKRD6Q9Y2G4 727 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 ZNF510Q9Y2H8 683 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 MED16Q9Y2X0 877 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 L3MBTL1Q9Y468 752 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms