RNA–Protein interactions for RNA: ENST00000613478.1

CISD3-204, Transcript of CDGSH iron sulfur domain 3, human

APPRIS P1 TSL 2 BASIC

Gene CISD3, Length 2,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CISD3-204	ENST00000613478	MRNIP	Q6NTE8	343 aa		27.58	■■■□□ 2.01
CISD3-204	ENST00000613478	RBM23	Q86U06	439 aa	Known RBP	27.58	■■■□□ 2.01
CISD3-204	ENST00000613478	SLC22A9	Q8IVM8	553 aa		27.58	■■■□□ 2.01
CISD3-204	ENST00000613478	AFAP1L2	Q8N4X5	818 aa		27.58	■■■□□ 2.01
CISD3-204	ENST00000613478	FAR2	Q96K12	515 aa		27.58	■■■□□ 2.01
CISD3-204	ENST00000613478	RPL10L	Q96L21	214 aa	Known RBP	27.58	■■■□□ 2.01
CISD3-204	ENST00000613478	PPP1R36	Q96LQ0	422 aa		27.58	■■■□□ 2.01
CISD3-204	ENST00000613478	ZSWIM3	Q96MP5	696 aa		27.58	■■■□□ 2.01
CISD3-204	ENST00000613478	KIAA1522	Q9P206	1035 aa	Predicted RBP	27.58	■■■□□ 2.01
CISD3-204	ENST00000613478	RIMKLB	Q9ULI2	386 aa		27.58	■■■□□ 2.01
CISD3-204	ENST00000613478	CTSO	P43234	321 aa	Predicted RBP	27.57	■■■□□ 2
CISD3-204	ENST00000613478	UBE3A	Q05086	875 aa		27.57	■■■□□ 2
CISD3-204	ENST00000613478	PLEKHG6	Q3KR16	790 aa		27.57	■■■□□ 2
CISD3-204	ENST00000613478	RETSAT	Q6NUM9	610 aa		27.57	■■■□□ 2
CISD3-204	ENST00000613478	CAMK1D	Q8IU85	385 aa		27.57	■■■□□ 2
CISD3-204	ENST00000613478	GPR150	Q8NGU9	434 aa		27.57	■■■□□ 2
CISD3-204	ENST00000613478	RP9	Q8TA86	221 aa	Known RBP	27.57	■■■□□ 2
CISD3-204	ENST00000613478	LBHD1	Q9BQE6	289 aa	Predicted RBP	27.57	■■■□□ 2
CISD3-204	ENST00000613478	ADGRE3	Q9BY15	652 aa		27.57	■■■□□ 2
CISD3-204	ENST00000613478	MTIF3	Q9H2K0	278 aa	Known RBP	27.57	■■■□□ 2
CISD3-204	ENST00000613478	LINC00597	Q9H2U6	94 aa		27.57	■■■□□ 2
CISD3-204	ENST00000613478	RWDD3	Q9Y3V2	267 aa		27.57	■■■□□ 2
CISD3-204	ENST00000613478	ANPEP	P15144	967 aa		27.56	■■■□□ 2
CISD3-204	ENST00000613478	PFKL	P17858	780 aa		27.56	■■■□□ 2
CISD3-204	ENST00000613478	EPHB1	P54762	984 aa		27.56	■■■□□ 2
CISD3-204	ENST00000613478	TBL3	Q12788	808 aa	Known RBP	27.56	■■■□□ 2
CISD3-204	ENST00000613478	PDCD2	Q16342	344 aa	Predicted RBP	27.56	■■■□□ 2
CISD3-204	ENST00000613478	SH2D4B	Q5SQS7	431 aa		27.56	■■■□□ 2
CISD3-204	ENST00000613478	C9orf50	Q5SZB4	431 aa		27.56	■■■□□ 2
CISD3-204	ENST00000613478	TRIM68	Q6AZZ1	485 aa		27.56	■■■□□ 2
CISD3-204	ENST00000613478	ZNF549	Q6P9A3	640 aa		27.56	■■■□□ 2
CISD3-204	ENST00000613478	GRASP	Q7Z6J2	395 aa	Predicted RBP	27.56	■■■□□ 2
CISD3-204	ENST00000613478	JADE3	Q92613	823 aa		27.56	■■■□□ 2
CISD3-204	ENST00000613478	OSBPL1A	Q9BXW6	950 aa		27.56	■■■□□ 2
CISD3-204	ENST00000613478	CATSPERZ	Q9NTU4	200 aa		27.56	■■■□□ 2
CISD3-204	ENST00000613478	ABCB8	Q9NUT2	735 aa		27.56	■■■□□ 2
CISD3-204	ENST00000613478	EVL	Q9UI08	416 aa	Predicted RBP	27.56	■■■□□ 2
CISD3-204	ENST00000613478	WASF2	Q9Y6W5	498 aa		27.56	■■■□□ 2
CISD3-204	ENST00000613478		A8MT66	165 aa		27.56	■■■□□ 2
CISD3-204	ENST00000613478	CA3	P07451	260 aa		27.56	■■■□□ 2
CISD3-204	ENST00000613478	NXN	Q6DKJ4	435 aa		27.56	■■■□□ 2
CISD3-204	ENST00000613478	ASTL	Q6HA08	431 aa	Predicted RBP	27.56	■■■□□ 2
CISD3-204	ENST00000613478	LMLN	Q96KR4	655 aa		27.56	■■■□□ 2
CISD3-204	ENST00000613478	TNKS2	Q9H2K2	1166 aa		27.56	■■■□□ 2
CISD3-204	ENST00000613478	ZNF385D	Q9H6B1	395 aa		27.56	■■■□□ 2
CISD3-204	ENST00000613478	BPIFA1	Q9NP55	256 aa		27.56	■■■□□ 2
CISD3-204	ENST00000613478	TDP1	Q9NUW8	608 aa		27.56	■■■□□ 2
CISD3-204	ENST00000613478	MAP3K7	O43318	606 aa		27.55	■■■□□ 2
CISD3-204	ENST00000613478	ZNF821	O75541	412 aa	Predicted RBP	27.55	■■■□□ 2
CISD3-204	ENST00000613478	WISP3	O95389	354 aa	Predicted RBP	27.55	■■■□□ 2
CISD3-204	ENST00000613478	HLA-F	P30511	346 aa		27.55	■■■□□ 2
CISD3-204	ENST00000613478	SATB1	Q01826	763 aa		27.55	■■■□□ 2
CISD3-204	ENST00000613478	PIM3	Q86V86	326 aa		27.55	■■■□□ 2
CISD3-204	ENST00000613478	KIRREL3	Q8IZU9	778 aa		27.55	■■■□□ 2
CISD3-204	ENST00000613478	FBXW8	Q8N3Y1	598 aa		27.55	■■■□□ 2
CISD3-204	ENST00000613478	ACD	Q96AP0	544 aa		27.55	■■■□□ 2
CISD3-204	ENST00000613478	MYCBP	Q99417	103 aa	Predicted RBP	27.55	■■■□□ 2
CISD3-204	ENST00000613478	MRGBP	Q9NV56	204 aa		27.55	■■■□□ 2
CISD3-204	ENST00000613478	NDE1	Q9NXR1	346 aa		27.55	■■■□□ 2
CISD3-204	ENST00000613478	GTSE1	Q9NYZ3	720 aa		27.55	■■■□□ 2
CISD3-204	ENST00000613478	NEMP2	A6NFY4	417 aa		27.55	■■■□□ 2
CISD3-204	ENST00000613478	C2orf81	A6NN90	581 aa		27.55	■■■□□ 2
CISD3-204	ENST00000613478	FZD6	O60353	706 aa		27.55	■■■□□ 2
CISD3-204	ENST00000613478	STK19	P49842	368 aa	Predicted RBP	27.55	■■■□□ 2
CISD3-204	ENST00000613478	CDKN1C	P49918	316 aa	Predicted RBP	27.55	■■■□□ 2
CISD3-204	ENST00000613478	CBX2	Q14781	532 aa	Predicted RBP	27.55	■■■□□ 2
CISD3-204	ENST00000613478	TMEM207	Q6UWW9	146 aa		27.55	■■■□□ 2
CISD3-204	ENST00000613478	ANKRD49	Q8WVL7	239 aa		27.55	■■■□□ 2
CISD3-204	ENST00000613478	ING5	Q8WYH8	240 aa		27.55	■■■□□ 2
CISD3-204	ENST00000613478	MAEL	Q96JY0	434 aa	Known RBP	27.55	■■■□□ 2
CISD3-204	ENST00000613478	LIN7A	O14910	233 aa	Predicted RBP	27.54	■■■□□ 2
CISD3-204	ENST00000613478	CYBB	P04839	570 aa		27.54	■■■□□ 2
CISD3-204	ENST00000613478	CTPS1	P17812	591 aa		27.54	■■■□□ 2
CISD3-204	ENST00000613478	GALNT1	Q10472	559 aa	Predicted RBP	27.54	■■■□□ 2
CISD3-204	ENST00000613478	CYLC2	Q14093	348 aa	Predicted RBP	27.54	■■■□□ 2
CISD3-204	ENST00000613478	HERC3	Q15034	1050 aa		27.54	■■■□□ 2
CISD3-204	ENST00000613478	DGKK	Q5KSL6	1271 aa		27.54	■■■□□ 2
CISD3-204	ENST00000613478	C16orf89	Q6UX73	402 aa		27.54	■■■□□ 2
CISD3-204	ENST00000613478	SNX32	Q86XE0	403 aa		27.54	■■■□□ 2
CISD3-204	ENST00000613478	POLR3B	Q9NW08	1133 aa	Predicted RBP	27.54	■■■□□ 2
CISD3-204	ENST00000613478	FNDC3A	Q9Y2H6	1198 aa	Known RBP	27.54	■■■□□ 2
CISD3-204	ENST00000613478	PDE5A	O76074	875 aa		27.53	■■■□□ 2
CISD3-204	ENST00000613478	PENK	P01210	267 aa	Predicted RBP	27.53	■■■□□ 2
CISD3-204	ENST00000613478	OGN	P20774	298 aa	Known RBP	27.53	■■■□□ 2
CISD3-204	ENST00000613478	TIAL1	Q01085	375 aa	Known RBP eCLIP	27.53	■■■□□ 2
CISD3-204	ENST00000613478	PEX6	Q13608	980 aa		27.53	■■■□□ 2
CISD3-204	ENST00000613478	ARHGAP15	Q53QZ3	475 aa		27.53	■■■□□ 2
CISD3-204	ENST00000613478	PRSS36	Q5K4E3	855 aa		27.53	■■■□□ 2
CISD3-204	ENST00000613478	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	27.53	■■■□□ 2
CISD3-204	ENST00000613478	CYP4F12	Q9HCS2	524 aa		27.53	■■■□□ 2
CISD3-204	ENST00000613478	PRPF19	Q9UMS4	504 aa	Known RBP	27.53	■■■□□ 2
CISD3-204	ENST00000613478	JUN	P05412	331 aa	Known RBP	27.53	■■■□□ 2
CISD3-204	ENST00000613478	ALPI	P09923	528 aa		27.53	■■■□□ 2
CISD3-204	ENST00000613478	LPO	P22079	712 aa	Predicted RBP	27.53	■■■□□ 2
CISD3-204	ENST00000613478	DDX6	P26196	483 aa	Known RBP eCLIP	27.53	■■■□□ 2
CISD3-204	ENST00000613478	PITRM1	Q5JRX3	1037 aa		27.53	■■■□□ 2
CISD3-204	ENST00000613478	TTC30B	Q8N4P2	665 aa		27.53	■■■□□ 2
CISD3-204	ENST00000613478	CEP70	Q8NHQ1	597 aa		27.53	■■■□□ 2
CISD3-204	ENST00000613478	TRMO	Q9BU70	441 aa		27.53	■■■□□ 2
CISD3-204	ENST00000613478	CERS4	Q9HA82	394 aa		27.53	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms