RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 DPF3Q92784 378 aa8.7□□□□□ -1.02
PDE6A-204ENST00000613228 HGH1Q9BTY7 390 aa8.7□□□□□ -1.02
PDE6A-204ENST00000613228 FBXO6Q9NRD1 293 aaPredicted RBP8.7□□□□□ -1.02
PDE6A-204ENST00000613228 TMEM248Q9NWD8 314 aa8.7□□□□□ -1.02
PDE6A-204ENST00000613228 SCN3BQ9NY72 215 aa8.7□□□□□ -1.02
PDE6A-204ENST00000613228 NUDT4Q9NZJ9 180 aa8.7□□□□□ -1.02
PDE6A-204ENST00000613228 MPP6Q9NZW5 540 aa8.7□□□□□ -1.02
PDE6A-204ENST00000613228 MRPS23Q9Y3D9 190 aaKnown RBP8.7□□□□□ -1.02
PDE6A-204ENST00000613228 CENPBD1B2RD01 187 aa8.7□□□□□ -1.02
PDE6A-204ENST00000613228 E9PBE3 544 aa8.7□□□□□ -1.02
PDE6A-204ENST00000613228 HDAC3O15379 428 aa8.7□□□□□ -1.02
PDE6A-204ENST00000613228 NPHS1O60500 1241 aa8.7□□□□□ -1.02
PDE6A-204ENST00000613228 NOS1APO75052 506 aaPredicted RBP8.7□□□□□ -1.02
PDE6A-204ENST00000613228 NFATC1O95644 943 aa8.7□□□□□ -1.02
PDE6A-204ENST00000613228 FYNP06241 537 aa8.7□□□□□ -1.02
PDE6A-204ENST00000613228 PFKLP17858 780 aa8.7□□□□□ -1.02
PDE6A-204ENST00000613228 TP53BP2Q13625 1128 aa8.7□□□□□ -1.02
PDE6A-204ENST00000613228 CA9Q16790 459 aa8.7□□□□□ -1.02
PDE6A-204ENST00000613228 C6orf10Q5SRN2 563 aa8.7□□□□□ -1.02
PDE6A-204ENST00000613228 PPP1R13LQ8WUF5 828 aa8.7□□□□□ -1.02
PDE6A-204ENST00000613228 HMCESQ96FZ2 354 aa8.7□□□□□ -1.02
PDE6A-204ENST00000613228 UQCC2Q9BRT2 126 aa8.7□□□□□ -1.02
PDE6A-204ENST00000613228 HAPLN2Q9GZV7 340 aa8.7□□□□□ -1.02
PDE6A-204ENST00000613228 CFAP97Q9P2B7 532 aa8.7□□□□□ -1.02
PDE6A-204ENST00000613228 NUDT5Q9UKK9 219 aa8.7□□□□□ -1.02
PDE6A-204ENST00000613228 TMEM98Q9Y2Y6 226 aa8.7□□□□□ -1.02
PDE6A-204ENST00000613228 ZFP37Q9Y6Q3 630 aaPredicted RBP8.7□□□□□ -1.02
PDE6A-204ENST00000613228 FAM159BA6NKW6 160 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 HAS3O00219 553 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 CCL5P13501 91 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 CXCR2P25025 360 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 OGDHQ02218 1023 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 BST1Q10588 318 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 TAF5Q15542 800 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 SETMARQ53H47 684 aaPredicted RBP8.69□□□□□ -1.02
PDE6A-204ENST00000613228 ATAD1Q8NBU5 361 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 OR8D1Q8WZ84 308 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 TRIB2Q92519 343 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 RNF186Q9NXI6 227 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 TMEM216Q9P0N5 145 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 PITPNM1O00562 1244 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 CCNKO75909 580 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 OTCP00480 354 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 CATP04040 527 aaKnown RBP8.69□□□□□ -1.02
PDE6A-204ENST00000613228 ACADMP11310 421 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 SGCGQ13326 291 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 PEX6Q13608 980 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 CRY1Q16526 586 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 ARMC4Q5T2S8 1044 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 SDHAF4Q5VUM1 108 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 CES5AQ6NT32 575 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 RIPOR1Q6ZS17 1223 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 BRSK1Q8TDC3 778 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 HSPBAP1Q96EW2 488 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 PGAP3Q96FM1 320 aaPredicted RBP8.69□□□□□ -1.02
PDE6A-204ENST00000613228 SAMD11Q96NU1 681 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 SMOQ99835 787 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 UNC93B1Q9H1C4 597 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 RNF39Q9H2S5 420 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 EHD1Q9H4M9 534 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 ASB8Q9H765 288 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 ACTR8Q9H981 624 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 DNAJB4Q9UDY4 337 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 PRPF19Q9UMS4 504 aaKnown RBP8.69□□□□□ -1.02
PDE6A-204ENST00000613228 VPS4AQ9UN37 437 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 CORO2BQ9UQ03 480 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 TRIM64A6NGJ6 449 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 TRIM64BA6NI03 449 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 TMEM189-UBE2V1I3L0A0 370 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 PSMD11O00231 422 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 CCRL2O00421 344 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 CCNT2O60583 730 aaKnown RBP8.69□□□□□ -1.02
PDE6A-204ENST00000613228 AVILO75366 819 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 PRKACAP17612 351 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 RUNX1T1Q06455 604 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 RING1Q06587 406 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.69□□□□□ -1.02
PDE6A-204ENST00000613228 ELP6Q0PNE2 266 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 HECTD2Q5U5R9 776 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 NEK10Q6ZWH5 1172 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 CYS1Q717R9 158 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 MICU2Q8IYU8 434 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 ENDOVQ8N8Q3 282 aaKnown RBP8.69□□□□□ -1.02
PDE6A-204ENST00000613228 DBF4BQ8NFT6 615 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 IRF2BPLQ9H1B7 796 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 MUC13Q9H3R2 512 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 ERVK-11Q9UQG0 969 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 FAM32AQ9Y421 112 aaKnown RBP8.69□□□□□ -1.02
PDE6A-204ENST00000613228 DOCK1Q14185 1865 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 NCF1BA6NI72 391 aaPredicted RBP8.69□□□□□ -1.02
PDE6A-204ENST00000613228 NCF1CA8MVU1 366 aaPredicted RBP8.69□□□□□ -1.02
PDE6A-204ENST00000613228 BOLA2-SMG1P6H3BVE0 249 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 M0QZQ0 153 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 BTN3A3O00478 584 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 PPEF2O14830 753 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 CFHP08603 1231 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 OR4Q2P0C623 313 aa8.69□□□□□ -1.02
PDE6A-204ENST00000613228 NCF1P14598 390 aaPredicted RBP8.69□□□□□ -1.02
PDE6A-204ENST00000613228 HOXA11P31270 313 aaPredicted RBP8.69□□□□□ -1.02
PDE6A-204ENST00000613228 HPCAL1P37235 193 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms