RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 OXR1Q8N573 874 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 LILRB4Q8NHJ6 448 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 UCMAQ8WVF2 138 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 TSNAXQ99598 290 aaKnown RBP8.75□□□□□ -1.01
TTC28-208ENST00000612946 A0A0J9YVX5 310 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 DARSP14868 501 aaKnown RBP8.75□□□□□ -1.01
TTC28-208ENST00000612946 ALDH4A1P30038 563 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 NCS1P62166 190 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 CRY1Q16526 586 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 DPY19L1Q2PZI1 675 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 ASTE1Q2TB18 679 aaPredicted RBP8.75□□□□□ -1.01
TTC28-208ENST00000612946 HYIQ5T013 277 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 MMAAQ8IVH4 418 aaKnown RBP8.75□□□□□ -1.01
TTC28-208ENST00000612946 ZNF615Q8N8J6 731 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 NR4A3Q92570 626 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 DNAJB9Q9UBS3 223 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 ZNF438Q7Z4V0 828 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 ELMO1Q92556 727 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 KAT5Q92993 513 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 TAS2R9Q9NYW1 312 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 LMTK2Q8IWU2 1503 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 VWDEQ8N2E2 1590 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 ULK1O75385 1050 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 GNAO1P09471 354 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 KCNA6P17658 529 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 HTR2BP41595 481 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 KDELC2Q7Z4H8 507 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 NLNQ9BYT8 704 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 SCUBE2Q9NQ36 999 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 TFR2Q9UP52 801 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 DISP1Q96F81 1524 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 KRBOX1C9JBD0 128 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 MID1O15344 667 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 ZNF621Q6ZSS3 439 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 UBE2J2Q8N2K1 259 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 OR8K5Q8NH50 307 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 ZNF317Q96PQ6 595 aaPredicted RBP8.75□□□□□ -1.01
TTC28-208ENST00000612946 OGDHLQ9ULD0 1010 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 ALDH1A2O94788 518 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 DGKAP23743 735 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 COL28A1Q2UY09 1125 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 BTBD16Q32M84 506 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 IDNKQ5T6J7 187 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 RNF148Q8N7C7 305 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 SLC37A3Q8NCC5 494 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 SIMC1Q8NDZ2 872 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 NUDT15Q9NV35 164 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 DNPEPQ9ULA0 475 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 ASB4Q9Y574 426 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 C2orf71A6NGG8 1288 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 MAPK3P27361 379 aaPredicted RBP8.75□□□□□ -1.01
TTC28-208ENST00000612946 C6orf89Q6UWU4 347 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 PCDH20Q8N6Y1 951 aaKnown RBP8.75□□□□□ -1.01
TTC28-208ENST00000612946 SLCO1B3Q9NPD5 702 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 ENTPD4Q9Y227 616 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 GNAZP19086 355 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 ARCN1P48444 511 aaKnown RBP8.74□□□□□ -1.01
TTC28-208ENST00000612946 HMGN3Q15651 99 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 IER5Q5VY09 327 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 KANK2Q63ZY3 851 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 LINC00299Q6ZSB3 139 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 FSCN2O14926 492 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 IPO13O94829 963 aaKnown RBP8.74□□□□□ -1.01
TTC28-208ENST00000612946 PAPSS2O95340 614 aaPredicted RBP8.74□□□□□ -1.01
TTC28-208ENST00000612946 LINGO3P0C6S8 592 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 GTF2E2P29084 291 aaKnown RBP8.74□□□□□ -1.01
TTC28-208ENST00000612946 CREMQ03060 361 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 PCSK7Q16549 785 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 SPON2Q9BUD6 331 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 FNDC11Q9BVV2 318 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 OXCT2Q9BYC2 517 aaPredicted RBP8.74□□□□□ -1.01
TTC28-208ENST00000612946 PUS3Q9BZE2 481 aaKnown RBP8.74□□□□□ -1.01
TTC28-208ENST00000612946 EIF2B3Q9NR50 452 aaKnown RBP8.74□□□□□ -1.01
TTC28-208ENST00000612946 WDPCPO95876 746 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 A1BGP04217 495 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 DEFA6Q01524 100 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 PDZD9Q8IXQ8 264 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 FAM126AQ9BYI3 521 aaPredicted RBP8.74□□□□□ -1.01
TTC28-208ENST00000612946 SNTG2Q9NY99 539 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 HSPE1-MOB4S4R3N1 261 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 SOX30O94993 753 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 CD36P16671 472 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 BMT2Q1RMZ1 405 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 SLC47A2Q86VL8 602 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 SPATA2LQ8IUW3 424 aaPredicted RBP8.74□□□□□ -1.01
TTC28-208ENST00000612946 OR4A15Q8NGL6 344 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 SLC5A5Q92911 643 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 THUMPD1Q9NXG2 353 aaKnown RBP8.74□□□□□ -1.01
TTC28-208ENST00000612946 GTF2A1LQ9UNN4 478 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 ZNF432O94892 652 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 BMP7P18075 431 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 SOX11P35716 441 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 PBX1P40424 430 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 IQCCQ4KMZ1 466 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 TMEM119Q4V9L6 283 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 TOMM5Q8N4H5 51 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 DNAJC1Q96KC8 554 aaKnown RBP8.74□□□□□ -1.01
TTC28-208ENST00000612946 CDH10Q9Y6N8 788 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 OR5F1O95221 314 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 CYP11A1P05108 521 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms