RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 TTLL3Q9Y4R7 772 aa13.09□□□□□ -0.31
RPS28-204ENST00000602140 TRBV23OR9-2A0A075B6M9 112 aa13.08□□□□□ -0.32
RPS28-204ENST00000602140 A0A1W2PQJ5 194 aa13.08□□□□□ -0.32
RPS28-204ENST00000602140 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.08□□□□□ -0.32
RPS28-204ENST00000602140 STMND1H3BQB6 276 aa13.08□□□□□ -0.32
RPS28-204ENST00000602140 INPP4BO15327 924 aa13.08□□□□□ -0.32
RPS28-204ENST00000602140 ASMTLO95671 621 aa13.08□□□□□ -0.32
RPS28-204ENST00000602140 PYGLP06737 847 aa13.08□□□□□ -0.32
RPS28-204ENST00000602140 ATXN8OSP0DMR3 200 aa13.08□□□□□ -0.32
RPS28-204ENST00000602140 CSF2RBP32927 897 aa13.08□□□□□ -0.32
RPS28-204ENST00000602140 ARSDP51689 593 aa13.08□□□□□ -0.32
RPS28-204ENST00000602140 ARSEP51690 589 aa13.08□□□□□ -0.32
RPS28-204ENST00000602140 STC1P52823 247 aa13.08□□□□□ -0.32
RPS28-204ENST00000602140 CYP4F2P78329 520 aa13.08□□□□□ -0.32
RPS28-204ENST00000602140 GALNT2Q10471 571 aa13.08□□□□□ -0.32
RPS28-204ENST00000602140 TRA2AQ13595 282 aaKnown RBP eCLIP13.08□□□□□ -0.32
RPS28-204ENST00000602140 DPYSL3Q14195 570 aa13.08□□□□□ -0.32
RPS28-204ENST00000602140 PAFAH1B3Q15102 231 aaKnown RBP13.08□□□□□ -0.32
RPS28-204ENST00000602140 ALG1LQ6GMV1 187 aa13.08□□□□□ -0.32
RPS28-204ENST00000602140 TIGD7Q6NT04 549 aaPredicted RBP13.08□□□□□ -0.32
RPS28-204ENST00000602140 ALKBH5Q6P6C2 394 aaKnown RBP13.08□□□□□ -0.32
RPS28-204ENST00000602140 XKR5Q6UX68 686 aa13.08□□□□□ -0.32
RPS28-204ENST00000602140 PRICKLE2Q7Z3G6 844 aa13.08□□□□□ -0.32
RPS28-204ENST00000602140 NLRP8Q86W28 1048 aa13.08□□□□□ -0.32
RPS28-204ENST00000602140 ZNF761Q86XN6 746 aaPredicted RBP13.08□□□□□ -0.32
RPS28-204ENST00000602140 GALNT13Q8IUC8 556 aa13.08□□□□□ -0.32
RPS28-204ENST00000602140 KCTD6Q8NC69 237 aa13.08□□□□□ -0.32
RPS28-204ENST00000602140 AGBL5Q8NDL9 886 aa13.08□□□□□ -0.32
RPS28-204ENST00000602140 EXD1Q8NHP7 514 aa13.08□□□□□ -0.32
RPS28-204ENST00000602140 LRRN4Q8WUT4 740 aa13.08□□□□□ -0.32
RPS28-204ENST00000602140 PMEPA1Q969W9 287 aa13.08□□□□□ -0.32
RPS28-204ENST00000602140 COX14Q96I36 57 aa13.08□□□□□ -0.32
RPS28-204ENST00000602140 FUCA2Q9BTY2 467 aa13.08□□□□□ -0.32
RPS28-204ENST00000602140 RIOK2Q9BVS4 552 aaKnown RBP13.08□□□□□ -0.32
RPS28-204ENST00000602140 KCNK4Q9NYG8 393 aa13.08□□□□□ -0.32
RPS28-204ENST00000602140 TMEM9Q9P0T7 183 aa13.08□□□□□ -0.32
RPS28-204ENST00000602140 CLDN7O95471 211 aa13.07□□□□□ -0.32
RPS28-204ENST00000602140 PRLP01236 227 aa13.07□□□□□ -0.32
RPS28-204ENST00000602140 ATP1A1P05023 1023 aaKnown RBP13.07□□□□□ -0.32
RPS28-204ENST00000602140 FAM87AP0C7U9 286 aa13.07□□□□□ -0.32
RPS28-204ENST00000602140 THRAP10827 490 aa13.07□□□□□ -0.32
RPS28-204ENST00000602140 CES1P23141 567 aa13.07□□□□□ -0.32
RPS28-204ENST00000602140 CCNCP24863 283 aa13.07□□□□□ -0.32
RPS28-204ENST00000602140 CSTF2P33240 577 aaKnown RBP eCLIP13.07□□□□□ -0.32
RPS28-204ENST00000602140 PBX1P40424 430 aa13.07□□□□□ -0.32
RPS28-204ENST00000602140 PPM1FP49593 454 aaPredicted RBP13.07□□□□□ -0.32
RPS28-204ENST00000602140 ZBED6P86452 979 aa13.07□□□□□ -0.32
RPS28-204ENST00000602140 FANCCQ00597 558 aa13.07□□□□□ -0.32
RPS28-204ENST00000602140 NIPAL4Q0D2K0 466 aa13.07□□□□□ -0.32
RPS28-204ENST00000602140 SQSTM1Q13501 440 aa13.07□□□□□ -0.32
RPS28-204ENST00000602140 LRP8Q14114 963 aa13.07□□□□□ -0.32
RPS28-204ENST00000602140 TBR1Q16650 682 aa13.07□□□□□ -0.32
RPS28-204ENST00000602140 IFI16Q16666 785 aaKnown RBP13.07□□□□□ -0.32
RPS28-204ENST00000602140 ANKRD20A8PQ5CZ79 823 aa13.07□□□□□ -0.32
RPS28-204ENST00000602140 CPNE8Q86YQ8 564 aa13.07□□□□□ -0.32
RPS28-204ENST00000602140 NRSN1Q8IZ57 195 aa13.07□□□□□ -0.32
RPS28-204ENST00000602140 LPCAT1Q8NF37 534 aa13.07□□□□□ -0.32
RPS28-204ENST00000602140 ARRDC2Q8TBH0 407 aa13.07□□□□□ -0.32
RPS28-204ENST00000602140 ZNF564Q8TBZ8 553 aaPredicted RBP13.07□□□□□ -0.32
RPS28-204ENST00000602140 SLC37A2Q8TED4 501 aa13.07□□□□□ -0.32
RPS28-204ENST00000602140 HTR3CQ8WXA8 447 aa13.07□□□□□ -0.32
RPS28-204ENST00000602140 ART4Q93070 314 aa13.07□□□□□ -0.32
RPS28-204ENST00000602140 TSGA13Q96PP4 275 aa13.07□□□□□ -0.32
RPS28-204ENST00000602140 DPYSL5Q9BPU6 564 aa13.07□□□□□ -0.32
RPS28-204ENST00000602140 TDRD1Q9BXT4 1180 aaKnown RBP13.07□□□□□ -0.32
RPS28-204ENST00000602140 FAM117AQ9C073 453 aa13.07□□□□□ -0.32
RPS28-204ENST00000602140 ZMYND15Q9H091 742 aa13.07□□□□□ -0.32
RPS28-204ENST00000602140 PCDH9Q9HC56 1237 aa13.07□□□□□ -0.32
RPS28-204ENST00000602140 ZNHIT2Q9UHR6 403 aa13.07□□□□□ -0.32
RPS28-204ENST00000602140 DNPEPQ9ULA0 475 aa13.07□□□□□ -0.32
RPS28-204ENST00000602140 CAPN11Q9UMQ6 739 aa13.07□□□□□ -0.32
RPS28-204ENST00000602140 PRKAB1Q9Y478 270 aa13.07□□□□□ -0.32
RPS28-204ENST00000602140 PCDHGA3Q9Y5H0 932 aa13.07□□□□□ -0.32
RPS28-204ENST00000602140 HEMK1Q9Y5R4 338 aaPredicted RBP13.07□□□□□ -0.32
RPS28-204ENST00000602140 B3GALT1Q9Y5Z6 326 aa13.07□□□□□ -0.32
RPS28-204ENST00000602140 EML2O95834 649 aa13.06□□□□□ -0.32
RPS28-204ENST00000602140 HLA-DQB2P05538 268 aa13.06□□□□□ -0.32
RPS28-204ENST00000602140 CA4P22748 312 aa13.06□□□□□ -0.32
RPS28-204ENST00000602140 FASLGP48023 281 aa13.06□□□□□ -0.32
RPS28-204ENST00000602140 ATP1A2P50993 1020 aa13.06□□□□□ -0.32
RPS28-204ENST00000602140 UBASH3AP57075 661 aa13.06□□□□□ -0.32
RPS28-204ENST00000602140 TPM4P67936 248 aa13.06□□□□□ -0.32
RPS28-204ENST00000602140 GPLD1P80108 840 aa13.06□□□□□ -0.32
RPS28-204ENST00000602140 TMEM71Q6P5X7 295 aa13.06□□□□□ -0.32
RPS28-204ENST00000602140 CHST15Q7LFX5 561 aaPredicted RBP13.06□□□□□ -0.32
RPS28-204ENST00000602140 LUZP1Q86V48 1076 aa13.06□□□□□ -0.32
RPS28-204ENST00000602140 SFRP1Q8N474 314 aa13.06□□□□□ -0.32
RPS28-204ENST00000602140 CCDC112Q8NEF3 446 aa13.06□□□□□ -0.32
RPS28-204ENST00000602140 FATE1Q969F0 183 aa13.06□□□□□ -0.32
RPS28-204ENST00000602140 NKD1Q969G9 470 aa13.06□□□□□ -0.32
RPS28-204ENST00000602140 AHCYL2Q96HN2 611 aaKnown RBP13.06□□□□□ -0.32
RPS28-204ENST00000602140 SLC38A3Q99624 504 aa13.06□□□□□ -0.32
RPS28-204ENST00000602140 ZNF670Q9BS34 389 aa13.06□□□□□ -0.32
RPS28-204ENST00000602140 CLMPQ9H6B4 373 aa13.06□□□□□ -0.32
RPS28-204ENST00000602140 CBX8Q9HC52 389 aa13.06□□□□□ -0.32
RPS28-204ENST00000602140 STARD5Q9NSY2 213 aa13.06□□□□□ -0.32
RPS28-204ENST00000602140 HAUS2Q9NVX0 235 aa13.06□□□□□ -0.32
RPS28-204ENST00000602140 OCIAD1Q9NX40 245 aa13.06□□□□□ -0.32
RPS28-204ENST00000602140 SLC39A1Q9NY26 324 aa13.06□□□□□ -0.32
RPS28-204ENST00000602140 AMACRQ9UHK6 382 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms