RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 MRPS21P82921 87 aaKnown RBP17.92■□□□□ 0.46
VRK3-225ENST00000601912 IL9RQ01113 521 aa17.92■□□□□ 0.46
VRK3-225ENST00000601912 NFATC2Q13469 925 aa17.92■□□□□ 0.46
VRK3-225ENST00000601912 INSCQ1MX18 579 aa17.92■□□□□ 0.46
VRK3-225ENST00000601912 FBXO43Q4G163 708 aa17.92■□□□□ 0.46
VRK3-225ENST00000601912 SLC44A4Q53GD3 710 aa17.92■□□□□ 0.46
VRK3-225ENST00000601912 PPM1JQ5JR12 505 aa17.92■□□□□ 0.46
VRK3-225ENST00000601912 HECTD2Q5U5R9 776 aa17.92■□□□□ 0.46
VRK3-225ENST00000601912 FAM45BPQ6NSW5 357 aa17.92■□□□□ 0.46
VRK3-225ENST00000601912 PIANPQ8IYJ0 282 aa17.92■□□□□ 0.46
VRK3-225ENST00000601912 PNPLA1Q8N8W4 532 aa17.92■□□□□ 0.46
VRK3-225ENST00000601912 GPR26Q8NDV2 337 aa17.92■□□□□ 0.46
VRK3-225ENST00000601912 ACVR1CQ8NER5 493 aa17.92■□□□□ 0.46
VRK3-225ENST00000601912 FAM45AQ8TCE6 357 aa17.92■□□□□ 0.46
VRK3-225ENST00000601912 ZNF398Q8TD17 642 aa17.92■□□□□ 0.46
VRK3-225ENST00000601912 RAB7BQ96AH8 199 aa17.92■□□□□ 0.46
VRK3-225ENST00000601912 NDNQ99608 321 aa17.92■□□□□ 0.46
VRK3-225ENST00000601912 GABRG3Q99928 467 aa17.92■□□□□ 0.46
VRK3-225ENST00000601912 OMDQ99983 421 aa17.92■□□□□ 0.46
VRK3-225ENST00000601912 HDAC8Q9BY41 377 aa17.92■□□□□ 0.46
VRK3-225ENST00000601912 CDH19Q9H159 772 aa17.92■□□□□ 0.46
VRK3-225ENST00000601912 FBRSQ9HAH7 460 aa17.92■□□□□ 0.46
VRK3-225ENST00000601912 MLXIPLQ9NP71 852 aa17.92■□□□□ 0.46
VRK3-225ENST00000601912 ANKRD6Q9Y2G4 727 aa17.92■□□□□ 0.46
VRK3-225ENST00000601912 PLLPQ9Y342 182 aa17.92■□□□□ 0.46
VRK3-225ENST00000601912 COL4A2P08572 1712 aa17.91■□□□□ 0.46
VRK3-225ENST00000601912 RGSL1A5PLK6 1076 aa17.91■□□□□ 0.46
VRK3-225ENST00000601912 H0Y858 1186 aa17.91■□□□□ 0.46
VRK3-225ENST00000601912 SHOX2O60902 331 aaPredicted RBP17.91■□□□□ 0.46
VRK3-225ENST00000601912 ADH1BP00325 375 aa17.91■□□□□ 0.46
VRK3-225ENST00000601912 GSTA1P08263 222 aa17.91■□□□□ 0.46
VRK3-225ENST00000601912 ELFN1P0C7U0 828 aa17.91■□□□□ 0.46
VRK3-225ENST00000601912 IL9P15248 144 aa17.91■□□□□ 0.46
VRK3-225ENST00000601912 CDKN1CP49918 316 aaPredicted RBP17.91■□□□□ 0.46
VRK3-225ENST00000601912 METAP1P53582 386 aa17.91■□□□□ 0.46
VRK3-225ENST00000601912 SATB1Q01826 763 aa17.91■□□□□ 0.46
VRK3-225ENST00000601912 CCDC15Q0P6D6 951 aa17.91■□□□□ 0.46
VRK3-225ENST00000601912 CHRNA6Q15825 494 aa17.91■□□□□ 0.46
VRK3-225ENST00000601912 HABP4Q5JVS0 413 aaKnown RBP17.91■□□□□ 0.46
VRK3-225ENST00000601912 RBM20Q5T481 1227 aaKnown RBP17.91■□□□□ 0.46
VRK3-225ENST00000601912 LVRNQ6Q4G3 990 aa17.91■□□□□ 0.46
VRK3-225ENST00000601912 IL17RCQ8NAC3 791 aa17.91■□□□□ 0.46
VRK3-225ENST00000601912 ATXN2LQ8WWM7 1075 aaKnown RBP17.91■□□□□ 0.46
VRK3-225ENST00000601912 FAM3CQ92520 227 aa17.91■□□□□ 0.46
VRK3-225ENST00000601912 LPGAT1Q92604 370 aa17.91■□□□□ 0.46
VRK3-225ENST00000601912 TSNARE1Q96NA8 513 aa17.91■□□□□ 0.46
VRK3-225ENST00000601912 CRLS1Q9UJA2 301 aa17.91■□□□□ 0.46
VRK3-225ENST00000601912 LOC730098B7Z3J9 87 aa17.9■□□□□ 0.46
VRK3-225ENST00000601912 PSMD11O00231 422 aa17.9■□□□□ 0.46
VRK3-225ENST00000601912 NEMP1O14524 444 aa17.9■□□□□ 0.46
VRK3-225ENST00000601912 GAPDHSO14556 408 aaPredicted RBP17.9■□□□□ 0.46
VRK3-225ENST00000601912 KLF8O95600 359 aaPredicted RBP17.9■□□□□ 0.46
VRK3-225ENST00000601912 ASMTLO95671 621 aa17.9■□□□□ 0.46
VRK3-225ENST00000601912 LSP1P33241 339 aa17.9■□□□□ 0.46
VRK3-225ENST00000601912 PTGER3P43115 390 aa17.9■□□□□ 0.46
VRK3-225ENST00000601912 WDR4P57081 412 aaKnown RBP17.9■□□□□ 0.46
VRK3-225ENST00000601912 TAS2R39P59534 338 aa17.9■□□□□ 0.46
VRK3-225ENST00000601912 GABPB1Q06547 395 aaPredicted RBP17.9■□□□□ 0.46
VRK3-225ENST00000601912 RALGDSQ12967 914 aa17.9■□□□□ 0.46
VRK3-225ENST00000601912 ITGA9Q13797 1035 aa17.9■□□□□ 0.46
VRK3-225ENST00000601912 ZKSCAN8Q15776 578 aaPredicted RBP17.9■□□□□ 0.46
VRK3-225ENST00000601912 CST6Q15828 149 aa17.9■□□□□ 0.46
VRK3-225ENST00000601912 HSD11B1LQ7Z5J1 315 aa17.9■□□□□ 0.46
VRK3-225ENST00000601912 CCDC91Q7Z6B0 441 aa17.9■□□□□ 0.46
VRK3-225ENST00000601912 LCA5Q86VQ0 697 aa17.9■□□□□ 0.46
VRK3-225ENST00000601912 RAVER1Q8IY67 606 aaKnown RBP17.9■□□□□ 0.46
VRK3-225ENST00000601912 OR2T3Q8NH03 318 aa17.9■□□□□ 0.46
VRK3-225ENST00000601912 GDAP1Q8TB36 358 aa17.9■□□□□ 0.46
VRK3-225ENST00000601912 ERLEC1Q96DZ1 483 aa17.9■□□□□ 0.46
VRK3-225ENST00000601912 FAM111AQ96PZ2 611 aa17.9■□□□□ 0.46
VRK3-225ENST00000601912 FAM83DQ9H4H8 585 aa17.9■□□□□ 0.46
VRK3-225ENST00000601912 SLC17A7Q9P2U7 560 aa17.9■□□□□ 0.46
VRK3-225ENST00000601912 ACOT9Q9Y305 439 aa17.9■□□□□ 0.46
VRK3-225ENST00000601912 SPTBN5Q9NRC6 3674 aaKnown RBP17.9■□□□□ 0.46
VRK3-225ENST00000601912 UNC80Q8N2C7 3258 aa17.9■□□□□ 0.46
VRK3-225ENST00000601912 A0A087X1B8 175 aa17.9■□□□□ 0.46
VRK3-225ENST00000601912 MAN2B1O00754 1011 aa17.9■□□□□ 0.46
VRK3-225ENST00000601912 AREL1O15033 823 aa17.9■□□□□ 0.46
VRK3-225ENST00000601912 PHGDHO43175 533 aaKnown RBP17.9■□□□□ 0.46
VRK3-225ENST00000601912 COL6A2P12110 1019 aa17.9■□□□□ 0.46
VRK3-225ENST00000601912 HOXB2P14652 356 aa17.9■□□□□ 0.46
VRK3-225ENST00000601912 C5AR1P21730 350 aa17.9■□□□□ 0.46
VRK3-225ENST00000601912 DCDC1P59894 354 aa17.9■□□□□ 0.46
VRK3-225ENST00000601912 ZNF776Q68DI1 518 aaPredicted RBP17.9■□□□□ 0.46
VRK3-225ENST00000601912 LIPIQ6XZB0 460 aa17.9■□□□□ 0.46
VRK3-225ENST00000601912 KYAT3Q6YP21 454 aaKnown RBP17.9■□□□□ 0.46
VRK3-225ENST00000601912 CDHR3Q6ZTQ4 885 aa17.9■□□□□ 0.46
VRK3-225ENST00000601912 SERPINA9Q86WD7 417 aa17.9■□□□□ 0.46
VRK3-225ENST00000601912 TXNDC5Q8NBS9 432 aaKnown RBP17.9■□□□□ 0.46
VRK3-225ENST00000601912 COMMD10Q9Y6G5 202 aa17.9■□□□□ 0.46
VRK3-225ENST00000601912 TRBV5-4A0A0C4DH59 114 aa17.89■□□□□ 0.45
VRK3-225ENST00000601912 GOLGA8CPA6NN73 597 aa17.89■□□□□ 0.45
VRK3-225ENST00000601912 SLC35E2BP0CK96 405 aa17.89■□□□□ 0.45
VRK3-225ENST00000601912 ZNF7P17097 686 aaPredicted RBP17.89■□□□□ 0.45
VRK3-225ENST00000601912 FMO4P31512 558 aa17.89■□□□□ 0.45
VRK3-225ENST00000601912 P2RY2P41231 377 aa17.89■□□□□ 0.45
VRK3-225ENST00000601912 CSRP3P50461 194 aa17.89■□□□□ 0.45
VRK3-225ENST00000601912 ADARP55265 1226 aaKnown RBP17.89■□□□□ 0.45
VRK3-225ENST00000601912 TFF2Q03403 129 aa17.89■□□□□ 0.45
VRK3-225ENST00000601912 ACOX1Q15067 660 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms