RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 PTK2BQ14289 1009 aa12.06□□□□□ -0.48
ZNF548-209ENST00000598895 QPCTQ16769 361 aa12.06□□□□□ -0.48
ZNF548-209ENST00000598895 SKIDA1Q1XH10 827 aa12.06□□□□□ -0.48
ZNF548-209ENST00000598895 INAVAQ3KP66 663 aa12.06□□□□□ -0.48
ZNF548-209ENST00000598895 SWT1Q5T5J6 900 aaKnown RBP12.06□□□□□ -0.48
ZNF548-209ENST00000598895 TTC19Q6DKK2 380 aaPredicted RBP12.06□□□□□ -0.48
ZNF548-209ENST00000598895 DARS2Q6PI48 645 aaKnown RBP12.06□□□□□ -0.48
ZNF548-209ENST00000598895 ENPP7Q6UWV6 458 aa12.06□□□□□ -0.48
ZNF548-209ENST00000598895 CCDC121Q6ZUS5 278 aa12.06□□□□□ -0.48
ZNF548-209ENST00000598895 KANSL1Q7Z3B3 1105 aa12.06□□□□□ -0.48
ZNF548-209ENST00000598895 TMC3Q7Z5M5 1100 aa12.06□□□□□ -0.48
ZNF548-209ENST00000598895 DCP2Q8IU60 420 aaKnown RBP12.06□□□□□ -0.48
ZNF548-209ENST00000598895 SLC25A45Q8N413 288 aa12.06□□□□□ -0.48
ZNF548-209ENST00000598895 BAHD1Q8TBE0 780 aaPredicted RBP12.06□□□□□ -0.48
ZNF548-209ENST00000598895 FAM174AQ8TBP5 190 aa12.06□□□□□ -0.48
ZNF548-209ENST00000598895 SPOCK2Q92563 424 aa12.06□□□□□ -0.48
ZNF548-209ENST00000598895 TSACCQ96A04 125 aaPredicted RBP12.06□□□□□ -0.48
ZNF548-209ENST00000598895 IFT43Q96FT9 208 aa12.06□□□□□ -0.48
ZNF548-209ENST00000598895 MCCC1Q96RQ3 725 aaPredicted RBP12.06□□□□□ -0.48
ZNF548-209ENST00000598895 FMO2Q99518 471 aa12.06□□□□□ -0.48
ZNF548-209ENST00000598895 AP1M1Q9BXS5 423 aa12.06□□□□□ -0.48
ZNF548-209ENST00000598895 DDX47Q9H0S4 455 aaKnown RBP12.06□□□□□ -0.48
ZNF548-209ENST00000598895 SLC25A51Q9H1U9 297 aa12.06□□□□□ -0.48
ZNF548-209ENST00000598895 SUDS3Q9H7L9 328 aaPredicted RBP12.06□□□□□ -0.48
ZNF548-209ENST00000598895 FTSJ1Q9UET6 329 aa12.06□□□□□ -0.48
ZNF548-209ENST00000598895 MTRF1LQ9UGC7 380 aaKnown RBP12.06□□□□□ -0.48
ZNF548-209ENST00000598895 KLF15Q9UIH9 416 aa12.06□□□□□ -0.48
ZNF548-209ENST00000598895 C1orf232A0A0U1RR37 186 aa12.05□□□□□ -0.48
ZNF548-209ENST00000598895 HACD1B0YJ81 288 aa12.05□□□□□ -0.48
ZNF548-209ENST00000598895 H3BM21 787 aa12.05□□□□□ -0.48
ZNF548-209ENST00000598895 KCNN4O15554 427 aa12.05□□□□□ -0.48
ZNF548-209ENST00000598895 PIAS2O75928 621 aa12.05□□□□□ -0.48
ZNF548-209ENST00000598895 CSF2P04141 144 aa12.05□□□□□ -0.48
ZNF548-209ENST00000598895 NUDT17P0C025 328 aa12.05□□□□□ -0.48
ZNF548-209ENST00000598895 FTH1P19P0C7X4 201 aa12.05□□□□□ -0.48
ZNF548-209ENST00000598895 MYF5P13349 255 aa12.05□□□□□ -0.48
ZNF548-209ENST00000598895 JUNDP17535 347 aa12.05□□□□□ -0.48
ZNF548-209ENST00000598895 HPDP32754 393 aaPredicted RBP12.05□□□□□ -0.48
ZNF548-209ENST00000598895 YPEL5P62699 121 aa12.05□□□□□ -0.48
ZNF548-209ENST00000598895 DR1Q01658 176 aa12.05□□□□□ -0.48
ZNF548-209ENST00000598895 DNAJC3Q13217 504 aa12.05□□□□□ -0.48
ZNF548-209ENST00000598895 XRCC4Q13426 336 aa12.05□□□□□ -0.48
ZNF548-209ENST00000598895 MTM1Q13496 603 aa12.05□□□□□ -0.48
ZNF548-209ENST00000598895 AGERQ15109 404 aa12.05□□□□□ -0.48
ZNF548-209ENST00000598895 UAP1Q16222 522 aaPredicted RBP12.05□□□□□ -0.48
ZNF548-209ENST00000598895 KRT71Q3SY84 523 aa12.05□□□□□ -0.48
ZNF548-209ENST00000598895 FAXCQ5TGI0 409 aa12.05□□□□□ -0.48
ZNF548-209ENST00000598895 MACC1Q6ZN28 852 aa12.05□□□□□ -0.48
ZNF548-209ENST00000598895 SLCO6A1Q86UG4 719 aa12.05□□□□□ -0.48
ZNF548-209ENST00000598895 HID1Q8IV36 788 aa12.05□□□□□ -0.48
ZNF548-209ENST00000598895 CDKL3Q8IVW4 592 aaPredicted RBP12.05□□□□□ -0.48
ZNF548-209ENST00000598895 PHACTR4Q8IZ21 702 aa12.05□□□□□ -0.48
ZNF548-209ENST00000598895 LMX1AQ8TE12 382 aa12.05□□□□□ -0.48
ZNF548-209ENST00000598895 FUBP1Q96AE4 644 aaKnown RBP12.05□□□□□ -0.48
ZNF548-209ENST00000598895 DTD2Q96FN9 168 aa12.05□□□□□ -0.48
ZNF548-209ENST00000598895 CABS1Q96KC9 395 aa12.05□□□□□ -0.48
ZNF548-209ENST00000598895 CNDP2Q96KP4 475 aaKnown RBP12.05□□□□□ -0.48
ZNF548-209ENST00000598895 ERP44Q9BS26 406 aa12.05□□□□□ -0.48
ZNF548-209ENST00000598895 MLPHQ9BV36 600 aaPredicted RBP12.05□□□□□ -0.48
ZNF548-209ENST00000598895 LGR4Q9BXB1 951 aa12.05□□□□□ -0.48
ZNF548-209ENST00000598895 ADGRE3Q9BY15 652 aa12.05□□□□□ -0.48
ZNF548-209ENST00000598895 CENPHQ9H3R5 247 aa12.05□□□□□ -0.48
ZNF548-209ENST00000598895 YY1AP1Q9H869 796 aa12.05□□□□□ -0.48
ZNF548-209ENST00000598895 APOBEC3BQ9UH17 382 aaKnown RBP12.05□□□□□ -0.48
ZNF548-209ENST00000598895 MOSPD1Q9UJG1 213 aa12.05□□□□□ -0.48
ZNF548-209ENST00000598895 EFR3BQ9Y2G0 817 aa12.05□□□□□ -0.48
ZNF548-209ENST00000598895 R3HDM2Q9Y2K5 976 aaKnown RBP12.05□□□□□ -0.48
ZNF548-209ENST00000598895 PPIL1Q9Y3C6 166 aa12.05□□□□□ -0.48
ZNF548-209ENST00000598895 CAPN7Q9Y6W3 813 aa12.05□□□□□ -0.48
ZNF548-209ENST00000598895 LRP4O75096 1905 aa12.05□□□□□ -0.48
ZNF548-209ENST00000598895 C5orf60A6NFR6 353 aa12.04□□□□□ -0.48
ZNF548-209ENST00000598895 TMEM202A6NGA9 273 aa12.04□□□□□ -0.48
ZNF548-209ENST00000598895 ANKRD66B4E2M5 251 aa12.04□□□□□ -0.48
ZNF548-209ENST00000598895 TRIM38O00635 465 aa12.04□□□□□ -0.48
ZNF548-209ENST00000598895 TTI1O43156 1089 aa12.04□□□□□ -0.48
ZNF548-209ENST00000598895 MTSS1O43312 755 aa12.04□□□□□ -0.48
ZNF548-209ENST00000598895 HYAL3O43820 417 aaPredicted RBP12.04□□□□□ -0.48
ZNF548-209ENST00000598895 PHF2O75151 1096 aa12.04□□□□□ -0.48
ZNF548-209ENST00000598895 LDOC1O95751 146 aaPredicted RBP12.04□□□□□ -0.48
ZNF548-209ENST00000598895 FGGP02679 453 aa12.04□□□□□ -0.48
ZNF548-209ENST00000598895 NME1P15531 152 aaKnown RBP12.04□□□□□ -0.48
ZNF548-209ENST00000598895 HTR1BP28222 390 aa12.04□□□□□ -0.48
ZNF548-209ENST00000598895 CHRNA4P43681 627 aa12.04□□□□□ -0.48
ZNF548-209ENST00000598895 HNRNPKP61978 463 aaKnown RBP eCLIP12.04□□□□□ -0.48
ZNF548-209ENST00000598895 PPARDQ03181 441 aa12.04□□□□□ -0.48
ZNF548-209ENST00000598895 PTSQ03393 145 aa12.04□□□□□ -0.48
ZNF548-209ENST00000598895 CDK18Q07002 472 aa12.04□□□□□ -0.48
ZNF548-209ENST00000598895 DHX9Q08211 1270 aaKnown RBP12.04□□□□□ -0.48
ZNF548-209ENST00000598895 NFATC4Q14934 902 aa12.04□□□□□ -0.48
ZNF548-209ENST00000598895 ALG11Q2TAA5 492 aa12.04□□□□□ -0.48
ZNF548-209ENST00000598895 RNF187Q5TA31 235 aaPredicted RBP12.04□□□□□ -0.48
ZNF548-209ENST00000598895 SEL1L2Q5TEA6 688 aa12.04□□□□□ -0.48
ZNF548-209ENST00000598895 RAET1GQ6H3X3 334 aa12.04□□□□□ -0.48
ZNF548-209ENST00000598895 ESRP1Q6NXG1 681 aaKnown RBP12.04□□□□□ -0.48
ZNF548-209ENST00000598895 PNCKQ6P2M8 343 aa12.04□□□□□ -0.48
ZNF548-209ENST00000598895 LYSMD3Q7Z3D4 306 aa12.04□□□□□ -0.48
ZNF548-209ENST00000598895 TAB3Q8N5C8 712 aaPredicted RBP12.04□□□□□ -0.48
ZNF548-209ENST00000598895 SLC25A41Q8N5S1 370 aa12.04□□□□□ -0.48
ZNF548-209ENST00000598895 ZNF548Q8NEK5 533 aaPredicted RBP12.04□□□□□ -0.48
ZNF548-209ENST00000598895 IPMKQ8NFU5 416 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms