RNA–Protein interactions for RNA: ENST00000592051.1

CIRBP-236, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-236	ENST00000592051	KHDC1	Q4VXA5	237 aa	Known RBP	11.27	□□□□□ -0.61
CIRBP-236	ENST00000592051	DNAJC21	Q5F1R6	531 aa	Known RBP	11.27	□□□□□ -0.61
CIRBP-236	ENST00000592051	ARMC3	Q5W041	872 aa		11.27	□□□□□ -0.61
CIRBP-236	ENST00000592051	STEAP4	Q687X5	459 aa		11.27	□□□□□ -0.61
CIRBP-236	ENST00000592051	ZC3H14	Q6PJT7	736 aa	Known RBP	11.27	□□□□□ -0.61
CIRBP-236	ENST00000592051	FAM151B	Q6UXP7	276 aa		11.27	□□□□□ -0.61
CIRBP-236	ENST00000592051	ADAMTSL4	Q6UY14	1074 aa		11.27	□□□□□ -0.61
CIRBP-236	ENST00000592051	SPATS2	Q86XZ4	545 aa	Known RBP	11.27	□□□□□ -0.61
CIRBP-236	ENST00000592051	IFT20	Q8IY31	132 aa		11.27	□□□□□ -0.61
CIRBP-236	ENST00000592051	GSPT2	Q8IYD1	628 aa	Known RBP	11.27	□□□□□ -0.61
CIRBP-236	ENST00000592051	PIANP	Q8IYJ0	282 aa		11.27	□□□□□ -0.61
CIRBP-236	ENST00000592051	UNC5B	Q8IZJ1	945 aa		11.27	□□□□□ -0.61
CIRBP-236	ENST00000592051	RGL4	Q8IZJ4	473 aa		11.27	□□□□□ -0.61
CIRBP-236	ENST00000592051	PDIK1L	Q8N165	341 aa		11.27	□□□□□ -0.61
CIRBP-236	ENST00000592051	SLC22A18AS	Q8N1D0	253 aa		11.27	□□□□□ -0.61
CIRBP-236	ENST00000592051	TRAM1L1	Q8N609	369 aa		11.27	□□□□□ -0.61
CIRBP-236	ENST00000592051	DTX3L	Q8TDB6	740 aa		11.27	□□□□□ -0.61
CIRBP-236	ENST00000592051	PTCD2	Q8WV60	388 aa	Known RBP	11.27	□□□□□ -0.61
CIRBP-236	ENST00000592051	PIGK	Q92643	395 aa		11.27	□□□□□ -0.61
CIRBP-236	ENST00000592051	HDAC10	Q969S8	669 aa		11.27	□□□□□ -0.61
CIRBP-236	ENST00000592051	CCDC97	Q96F63	343 aa	Predicted RBP	11.27	□□□□□ -0.61
CIRBP-236	ENST00000592051	LOXL4	Q96JB6	756 aa		11.27	□□□□□ -0.61
CIRBP-236	ENST00000592051	TEX101	Q9BY14	249 aa		11.27	□□□□□ -0.61
CIRBP-236	ENST00000592051	FAM96A	Q9H5X1	160 aa		11.27	□□□□□ -0.61
CIRBP-236	ENST00000592051	MARCH4	Q9P2E8	410 aa	Predicted RBP	11.27	□□□□□ -0.61
CIRBP-236	ENST00000592051	PNMA8B	Q9ULN7	279 aa	Predicted RBP	11.27	□□□□□ -0.61
CIRBP-236	ENST00000592051	NFU1	Q9UMS0	254 aa		11.27	□□□□□ -0.61
CIRBP-236	ENST00000592051	CHMP2B	Q9UQN3	213 aa		11.27	□□□□□ -0.61
CIRBP-236	ENST00000592051	PKP3	Q9Y446	797 aa		11.27	□□□□□ -0.61
CIRBP-236	ENST00000592051	OR1A2	Q9Y585	309 aa		11.27	□□□□□ -0.61
CIRBP-236	ENST00000592051	MAD1L1	Q9Y6D9	718 aa		11.27	□□□□□ -0.61
CIRBP-236	ENST00000592051	OAS3	Q9Y6K5	1087 aa	Known RBP	11.27	□□□□□ -0.61
CIRBP-236	ENST00000592051	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	11.27	□□□□□ -0.61
CIRBP-236	ENST00000592051	SDK1	Q7Z5N4	2213 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	TRBV5-4	A0A0C4DH59	114 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	GLYATL1P3	A0A0U1RQE8	302 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	MAGEB16	A2A368	324 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	PATE3	B3GLJ2	98 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	FPGT	O14772	594 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	NDC80	O14777	642 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	BCAT2	O15382	392 aa	Predicted RBP	11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	SRP72	O76094	671 aa	Known RBP	11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	GOT2	P00505	430 aa	Known RBP	11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	FUCA1	P04066	466 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	PGAM1	P18669	254 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	MC4R	P32245	332 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	FOXN2	P32314	431 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	CSNK1E	P49674	416 aa	Known RBP	11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	GPX6	P59796	221 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	PDE1B	Q01064	536 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	CUL1	Q13616	776 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	SEMA3A	Q14563	771 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	SMAD1	Q15797	465 aa	Known RBP	11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	CCDC6	Q16204	474 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	SKIDA1	Q1XH10	827 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	PLA2G2C	Q5R387	149 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	ZNF648	Q5T619	568 aa	Predicted RBP	11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	LAIR1	Q6GTX8	287 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	CASC4	Q6P4E1	433 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	KYAT3	Q6YP21	454 aa	Known RBP	11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	UNC5A	Q6ZN44	842 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051		Q6ZSR6	202 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	NLRP9	Q7RTR0	991 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	TRIM74	Q86UV6	250 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	SYT12	Q8IV01	421 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	FBXO36	Q8NEA4	188 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	ZNF398	Q8TD17	642 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	PEX13	Q92968	403 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	ZNF669	Q96BR6	464 aa	Predicted RBP	11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	LRRC39	Q96DD0	335 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	COX14	Q96I36	57 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	APOO	Q9BUR5	198 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	C1QTNF7	Q9BXJ2	289 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	CDH19	Q9H159	772 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	ARRDC1-AS1	Q9H2J1	176 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	SEMA4A	Q9H3S1	761 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	SMOC1	Q9H4F8	434 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	ARFGAP3	Q9NP61	516 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	SAYSD1	Q9NPB0	183 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	FSCN3	Q9NQT6	498 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	AASDHPPT	Q9NRN7	309 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	RAD18	Q9NS91	495 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	IL1RAPL1	Q9NZN1	696 aa		11.26	□□□□□ -0.61
CIRBP-236	ENST00000592051	GON4L	Q3T8J9	2241 aa		11.25	□□□□□ -0.61
CIRBP-236	ENST00000592051		A0A1B0GTW7	788 aa		11.25	□□□□□ -0.61
CIRBP-236	ENST00000592051		A0A1B0GVT2	93 aa		11.25	□□□□□ -0.61
CIRBP-236	ENST00000592051	TMEM202	A6NGA9	273 aa		11.25	□□□□□ -0.61
CIRBP-236	ENST00000592051	PROB1	E7EW31	1015 aa		11.25	□□□□□ -0.61
CIRBP-236	ENST00000592051	VILL	O15195	856 aa		11.25	□□□□□ -0.61
CIRBP-236	ENST00000592051	INPP4B	O15327	924 aa		11.25	□□□□□ -0.61
CIRBP-236	ENST00000592051	EIF3H	O15372	352 aa	Known RBP eCLIP	11.25	□□□□□ -0.61
CIRBP-236	ENST00000592051	VAPB	O95292	243 aa		11.25	□□□□□ -0.61
CIRBP-236	ENST00000592051	PRAMEF1	O95521	474 aa		11.25	□□□□□ -0.61
CIRBP-236	ENST00000592051	C1QA	P02745	245 aa		11.25	□□□□□ -0.61
CIRBP-236	ENST00000592051	HOXC4	P09017	264 aa	Predicted RBP	11.25	□□□□□ -0.61
CIRBP-236	ENST00000592051	TSHR	P16473	764 aa		11.25	□□□□□ -0.61
CIRBP-236	ENST00000592051	CD38	P28907	300 aa		11.25	□□□□□ -0.61
CIRBP-236	ENST00000592051	TNFRSF8	P28908	595 aa		11.25	□□□□□ -0.61
CIRBP-236	ENST00000592051	MAGEA4	P43358	317 aa		11.25	□□□□□ -0.61
CIRBP-236	ENST00000592051	GPR1	P46091	355 aa		11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms