RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 PCOLCE2Q9UKZ9 415 aa16.57■□□□□ 0.24
GCDH-213ENST00000590627 FZD4Q9ULV1 537 aa16.57■□□□□ 0.24
GCDH-213ENST00000590627 ZNF711Q9Y462 761 aa16.57■□□□□ 0.24
GCDH-213ENST00000590627 SPINT1O43278 529 aa16.56■□□□□ 0.24
GCDH-213ENST00000590627 ERLIN1O75477 346 aa16.56■□□□□ 0.24
GCDH-213ENST00000590627 TTC4O95801 387 aa16.56■□□□□ 0.24
GCDH-213ENST00000590627 CAPNS1P04632 268 aa16.56■□□□□ 0.24
GCDH-213ENST00000590627 PRKCGP05129 697 aa16.56■□□□□ 0.24
GCDH-213ENST00000590627 PIRTP0C851 137 aa16.56■□□□□ 0.24
GCDH-213ENST00000590627 ZNF30P17039 623 aa16.56■□□□□ 0.24
GCDH-213ENST00000590627 PGAM1P18669 254 aa16.56■□□□□ 0.24
GCDH-213ENST00000590627 HMGCLP35914 325 aa16.56■□□□□ 0.24
GCDH-213ENST00000590627 MMP12P39900 470 aa16.56■□□□□ 0.24
GCDH-213ENST00000590627 PDE1BQ01064 536 aa16.56■□□□□ 0.24
GCDH-213ENST00000590627 ELP6Q0PNE2 266 aa16.56■□□□□ 0.24
GCDH-213ENST00000590627 PTPRRQ15256 657 aa16.56■□□□□ 0.24
GCDH-213ENST00000590627 TMEM52BQ4KMG9 183 aa16.56■□□□□ 0.24
GCDH-213ENST00000590627 STEAP4Q687X5 459 aa16.56■□□□□ 0.24
GCDH-213ENST00000590627 CRTC1Q6UUV9 634 aa16.56■□□□□ 0.24
GCDH-213ENST00000590627 DBX2Q6ZNG2 339 aa16.56■□□□□ 0.24
GCDH-213ENST00000590627 TRMT10CQ7L0Y3 403 aaKnown RBP16.56■□□□□ 0.24
GCDH-213ENST00000590627 GLT6D1Q7Z4J2 308 aa16.56■□□□□ 0.24
GCDH-213ENST00000590627 PROSER1Q86XN7 944 aa16.56■□□□□ 0.24
GCDH-213ENST00000590627 RAVER1Q8IY67 606 aaKnown RBP16.56■□□□□ 0.24
GCDH-213ENST00000590627 CBARPQ8N350 705 aaPredicted RBP16.56■□□□□ 0.24
GCDH-213ENST00000590627 FBXO36Q8NEA4 188 aa16.56■□□□□ 0.24
GCDH-213ENST00000590627 CHRAC1Q9NRG0 131 aa16.56■□□□□ 0.24
GCDH-213ENST00000590627 TM7SF3Q9NS93 570 aa16.56■□□□□ 0.24
GCDH-213ENST00000590627 FBXL12Q9NXK8 326 aa16.56■□□□□ 0.24
GCDH-213ENST00000590627 SAMD15Q9P1V8 674 aa16.56■□□□□ 0.24
GCDH-213ENST00000590627 ZC3H7BQ9UGR2 993 aaKnown RBP16.56■□□□□ 0.24
GCDH-213ENST00000590627 PCDHGB2Q9Y5G2 931 aa16.56■□□□□ 0.24
GCDH-213ENST00000590627 FADS3Q9Y5Q0 445 aa16.56■□□□□ 0.24
GCDH-213ENST00000590627 MAD1L1Q9Y6D9 718 aa16.56■□□□□ 0.24
GCDH-213ENST00000590627 KNL1Q8NG31 2342 aa16.55■□□□□ 0.24
GCDH-213ENST00000590627 A0A1W2PP55 124 aa16.55■□□□□ 0.24
GCDH-213ENST00000590627 C2orf81A6NN90 581 aa16.55■□□□□ 0.24
GCDH-213ENST00000590627 PLK4O00444 970 aa16.55■□□□□ 0.24
GCDH-213ENST00000590627 AURKAO14965 403 aa16.55■□□□□ 0.24
GCDH-213ENST00000590627 USP1O94782 785 aa16.55■□□□□ 0.24
GCDH-213ENST00000590627 GSTA2P09210 222 aa16.55■□□□□ 0.24
GCDH-213ENST00000590627 H2AFXP16104 143 aaPredicted RBP16.55■□□□□ 0.24
GCDH-213ENST00000590627 LHCGRP22888 699 aa16.55■□□□□ 0.24
GCDH-213ENST00000590627 ZNF140P52738 457 aaPredicted RBP16.55■□□□□ 0.24
GCDH-213ENST00000590627 TAS2R38P59533 333 aa16.55■□□□□ 0.24
GCDH-213ENST00000590627 BNC1Q01954 994 aa16.55■□□□□ 0.24
GCDH-213ENST00000590627 ACVR1Q04771 509 aa16.55■□□□□ 0.24
GCDH-213ENST00000590627 RALGDSQ12967 914 aa16.55■□□□□ 0.24
GCDH-213ENST00000590627 FRG1Q14331 258 aaKnown RBP16.55■□□□□ 0.24
GCDH-213ENST00000590627 TSTD2Q5T7W7 516 aa16.55■□□□□ 0.24
GCDH-213ENST00000590627 DENND2CQ68D51 928 aa16.55■□□□□ 0.24
GCDH-213ENST00000590627 CASC4Q6P4E1 433 aa16.55■□□□□ 0.24
GCDH-213ENST00000590627 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.55■□□□□ 0.24
GCDH-213ENST00000590627 LYSMD3Q7Z3D4 306 aa16.55■□□□□ 0.24
GCDH-213ENST00000590627 CACUL1Q86Y37 369 aa16.55■□□□□ 0.24
GCDH-213ENST00000590627 ANKMY2Q8IV38 441 aa16.55■□□□□ 0.24
GCDH-213ENST00000590627 STYXQ8WUJ0 223 aa16.55■□□□□ 0.24
GCDH-213ENST00000590627 EID2BQ96D98 161 aa16.55■□□□□ 0.24
GCDH-213ENST00000590627 C9orf72Q96LT7 481 aa16.55■□□□□ 0.24
GCDH-213ENST00000590627 TTC25Q96NG3 672 aa16.55■□□□□ 0.24
GCDH-213ENST00000590627 OMDQ99983 421 aa16.55■□□□□ 0.24
GCDH-213ENST00000590627 ZFYVE1Q9HBF4 777 aa16.55■□□□□ 0.24
GCDH-213ENST00000590627 TREX1Q9NSU2 369 aa16.55■□□□□ 0.24
GCDH-213ENST00000590627 SERGEFQ9UGK8 458 aa16.55■□□□□ 0.24
GCDH-213ENST00000590627 CHMP2BQ9UQN3 213 aa16.55■□□□□ 0.24
GCDH-213ENST00000590627 NUMA1Q14980 2115 aa16.54■□□□□ 0.24
GCDH-213ENST00000590627 C1orf232A0A0U1RR37 186 aa16.54■□□□□ 0.24
GCDH-213ENST00000590627 PSMD11O00231 422 aa16.54■□□□□ 0.24
GCDH-213ENST00000590627 FLRT2O43155 660 aa16.54■□□□□ 0.24
GCDH-213ENST00000590627 TSPAN6O43657 245 aa16.54■□□□□ 0.24
GCDH-213ENST00000590627 RNASEH2AO75792 299 aaKnown RBP16.54■□□□□ 0.24
GCDH-213ENST00000590627 POLBP06746 335 aa16.54■□□□□ 0.24
GCDH-213ENST00000590627 LPOP22079 712 aaPredicted RBP16.54■□□□□ 0.24
GCDH-213ENST00000590627 ACSL1P33121 698 aa16.54■□□□□ 0.24
GCDH-213ENST00000590627 AFF3P51826 1226 aaKnown RBP16.54■□□□□ 0.24
GCDH-213ENST00000590627 STC1P52823 247 aa16.54■□□□□ 0.24
GCDH-213ENST00000590627 PMS2P54278 862 aa16.54■□□□□ 0.24
GCDH-213ENST00000590627 PTSQ03393 145 aa16.54■□□□□ 0.24
GCDH-213ENST00000590627 SEPT6Q14141 434 aa16.54■□□□□ 0.24
GCDH-213ENST00000590627 SKIDA1Q1XH10 827 aa16.54■□□□□ 0.24
GCDH-213ENST00000590627 HLA-BQ31612 363 aa16.54■□□□□ 0.24
GCDH-213ENST00000590627 ANKRD20A4Q4UJ75 823 aa16.54■□□□□ 0.24
GCDH-213ENST00000590627 LRRC73Q5JTD7 316 aa16.54■□□□□ 0.24
GCDH-213ENST00000590627 HP1BP3Q5SSJ5 553 aaPredicted RBP16.54■□□□□ 0.24
GCDH-213ENST00000590627 LRRC66Q68CR7 880 aa16.54■□□□□ 0.24
GCDH-213ENST00000590627 CYS1Q717R9 158 aa16.54■□□□□ 0.24
GCDH-213ENST00000590627 TSPAN33Q86UF1 283 aa16.54■□□□□ 0.24
GCDH-213ENST00000590627 FAM124AQ86V42 546 aa16.54■□□□□ 0.24
GCDH-213ENST00000590627 MREGQ8N565 214 aa16.54■□□□□ 0.24
GCDH-213ENST00000590627 PNPLA1Q8N8W4 532 aa16.54■□□□□ 0.24
GCDH-213ENST00000590627 BAHD1Q8TBE0 780 aaPredicted RBP16.54■□□□□ 0.24
GCDH-213ENST00000590627 SETD7Q8WTS6 366 aaKnown RBP16.54■□□□□ 0.24
GCDH-213ENST00000590627 GPR63Q9BZJ6 419 aa16.54■□□□□ 0.24
GCDH-213ENST00000590627 BTBD1Q9H0C5 482 aa16.54■□□□□ 0.24
GCDH-213ENST00000590627 CDC42EP4Q9H3Q1 356 aaKnown RBP16.54■□□□□ 0.24
GCDH-213ENST00000590627 KDM4CQ9H3R0 1056 aa16.54■□□□□ 0.24
GCDH-213ENST00000590627 IL21RQ9HBE5 538 aa16.54■□□□□ 0.24
GCDH-213ENST00000590627 PLAC1Q9HBJ0 212 aa16.54■□□□□ 0.24
GCDH-213ENST00000590627 LRRC4CQ9HCJ2 640 aa16.54■□□□□ 0.24
GCDH-213ENST00000590627 NINJ2Q9NZG7 142 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms