RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 ZRANB3Q5FWF4 1079 aa13.55□□□□□ -0.24
VMP1-210ENST00000589823 HP1BP3Q5SSJ5 553 aaPredicted RBP13.55□□□□□ -0.24
VMP1-210ENST00000589823 LAIR1Q6GTX8 287 aa13.55□□□□□ -0.24
VMP1-210ENST00000589823 AFTPHQ6ULP2 937 aa13.55□□□□□ -0.24
VMP1-210ENST00000589823 CES3Q6UWW8 571 aa13.55□□□□□ -0.24
VMP1-210ENST00000589823 KYAT3Q6YP21 454 aaKnown RBP13.55□□□□□ -0.24
VMP1-210ENST00000589823 GCNT7Q6ZNI0 430 aa13.55□□□□□ -0.24
VMP1-210ENST00000589823 PTAR1Q7Z6K3 402 aaPredicted RBP13.55□□□□□ -0.24
VMP1-210ENST00000589823 RABEPKQ7Z6M1 372 aa13.55□□□□□ -0.24
VMP1-210ENST00000589823 TMEM135Q86UB9 458 aa13.55□□□□□ -0.24
VMP1-210ENST00000589823 SYT12Q8IV01 421 aa13.55□□□□□ -0.24
VMP1-210ENST00000589823 ZBED8Q8IZ13 594 aa13.55□□□□□ -0.24
VMP1-210ENST00000589823 EIF1ADQ8N9N8 165 aaKnown RBP13.55□□□□□ -0.24
VMP1-210ENST00000589823 PLA2G15Q8NCC3 412 aa13.55□□□□□ -0.24
VMP1-210ENST00000589823 FBXO36Q8NEA4 188 aa13.55□□□□□ -0.24
VMP1-210ENST00000589823 OR13J1Q8NGT2 312 aa13.55□□□□□ -0.24
VMP1-210ENST00000589823 OR6P1Q8NGX9 317 aa13.55□□□□□ -0.24
VMP1-210ENST00000589823 DTX3LQ8TDB6 740 aa13.55□□□□□ -0.24
VMP1-210ENST00000589823 PYROXD1Q8WU10 500 aa13.55□□□□□ -0.24
VMP1-210ENST00000589823 HDAC10Q969S8 669 aa13.55□□□□□ -0.24
VMP1-210ENST00000589823 MFSD3Q96ES6 412 aa13.55□□□□□ -0.24
VMP1-210ENST00000589823 TBATAQ96M53 351 aa13.55□□□□□ -0.24
VMP1-210ENST00000589823 WDR26Q9H7D7 661 aa13.55□□□□□ -0.24
VMP1-210ENST00000589823 ANKZF1Q9H8Y5 726 aa13.55□□□□□ -0.24
VMP1-210ENST00000589823 TREX1Q9NSU2 369 aa13.55□□□□□ -0.24
VMP1-210ENST00000589823 ZC3H7BQ9UGR2 993 aaKnown RBP13.55□□□□□ -0.24
VMP1-210ENST00000589823 PILRBQ9UKJ0 227 aa13.55□□□□□ -0.24
VMP1-210ENST00000589823 CA5BQ9Y2D0 317 aa13.55□□□□□ -0.24
VMP1-210ENST00000589823 TEX264Q9Y6I9 313 aa13.55□□□□□ -0.24
VMP1-210ENST00000589823 ABCA7Q8IZY2 2146 aa13.55□□□□□ -0.24
VMP1-210ENST00000589823 LRRK1Q38SD2 2015 aa13.54□□□□□ -0.24
VMP1-210ENST00000589823 POM121BA6NF01 834 aa13.54□□□□□ -0.24
VMP1-210ENST00000589823 H0Y8X5 98 aa13.54□□□□□ -0.24
VMP1-210ENST00000589823 K7ESM1 405 aa13.54□□□□□ -0.24
VMP1-210ENST00000589823 CACNB4O00305 520 aaPredicted RBP13.54□□□□□ -0.24
VMP1-210ENST00000589823 MAGEC1O60732 1142 aa13.54□□□□□ -0.24
VMP1-210ENST00000589823 EPN2O95208 641 aa13.54□□□□□ -0.24
VMP1-210ENST00000589823 PRAMEF1O95521 474 aa13.54□□□□□ -0.24
VMP1-210ENST00000589823 MCM3P25205 808 aa13.54□□□□□ -0.24
VMP1-210ENST00000589823 TNFRSF8P28908 595 aa13.54□□□□□ -0.24
VMP1-210ENST00000589823 TRIM23P36406 574 aa13.54□□□□□ -0.24
VMP1-210ENST00000589823 RABIFP47224 123 aa13.54□□□□□ -0.24
VMP1-210ENST00000589823 ARSDP51689 593 aa13.54□□□□□ -0.24
VMP1-210ENST00000589823 AFF3P51826 1226 aaKnown RBP13.54□□□□□ -0.24
VMP1-210ENST00000589823 YPEL5P62699 121 aa13.54□□□□□ -0.24
VMP1-210ENST00000589823 XIAPP98170 497 aa13.54□□□□□ -0.24
VMP1-210ENST00000589823 OVGP1Q12889 678 aa13.54□□□□□ -0.24
VMP1-210ENST00000589823 PEX6Q13608 980 aa13.54□□□□□ -0.24
VMP1-210ENST00000589823 FASTKD3Q14CZ7 662 aaKnown RBP13.54□□□□□ -0.24
VMP1-210ENST00000589823 CHRNA6Q15825 494 aa13.54□□□□□ -0.24
VMP1-210ENST00000589823 ERCC6LQ2NKX8 1250 aa13.54□□□□□ -0.24
VMP1-210ENST00000589823 SPANXN3Q5MJ09 141 aa13.54□□□□□ -0.24
VMP1-210ENST00000589823 KIAA0930Q6ICG6 404 aaPredicted RBP13.54□□□□□ -0.24
VMP1-210ENST00000589823 ADAMTSL4Q6UY14 1074 aa13.54□□□□□ -0.24
VMP1-210ENST00000589823 ABI3BPQ7Z7G0 1075 aa13.54□□□□□ -0.24
VMP1-210ENST00000589823 IQCHQ86VS3 1027 aa13.54□□□□□ -0.24
VMP1-210ENST00000589823 HEATR4Q86WZ0 1026 aa13.54□□□□□ -0.24
VMP1-210ENST00000589823 MFSD2AQ8NA29 543 aa13.54□□□□□ -0.24
VMP1-210ENST00000589823 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.54□□□□□ -0.24
VMP1-210ENST00000589823 CEP76Q8TAP6 659 aa13.54□□□□□ -0.24
VMP1-210ENST00000589823 ZNF398Q8TD17 642 aa13.54□□□□□ -0.24
VMP1-210ENST00000589823 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.54□□□□□ -0.24
VMP1-210ENST00000589823 CFAP36Q96G28 342 aa13.54□□□□□ -0.24
VMP1-210ENST00000589823 KLHDC7BQ96G42 594 aa13.54□□□□□ -0.24
VMP1-210ENST00000589823 BMFQ96LC9 184 aa13.54□□□□□ -0.24
VMP1-210ENST00000589823 AGAP2Q99490 1192 aa13.54□□□□□ -0.24
VMP1-210ENST00000589823 APOOQ9BUR5 198 aa13.54□□□□□ -0.24
VMP1-210ENST00000589823 ASB8Q9H765 288 aa13.54□□□□□ -0.24
VMP1-210ENST00000589823 PHPT1Q9NRX4 125 aaPredicted RBP13.54□□□□□ -0.24
VMP1-210ENST00000589823 FAM86C1Q9NVL1 165 aa13.54□□□□□ -0.24
VMP1-210ENST00000589823 CRLS1Q9UJA2 301 aa13.54□□□□□ -0.24
VMP1-210ENST00000589823 PCDHGA5Q9Y5G8 931 aa13.54□□□□□ -0.24
VMP1-210ENST00000589823 MYLKQ15746 1914 aa13.54□□□□□ -0.24
VMP1-210ENST00000589823 CEP192Q8TEP8 1941 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 FANCMQ8IYD8 2048 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 A0A1W2PR77 199 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 CCDC162PA2VCL2 907 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 FADS2P1A8MWK0 482 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 GAPDHSO14556 408 aaPredicted RBP13.53□□□□□ -0.24
VMP1-210ENST00000589823 INPP4BO15327 924 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 UGT1A9O60656 530 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 VAPBO95292 243 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 SOD1P00441 154 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 GOT2P00505 430 aaKnown RBP13.53□□□□□ -0.24
VMP1-210ENST00000589823 THEGLP0DJG4 465 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 UGT1A6P19224 532 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 UGT1A1P22309 533 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 UGT1A4P22310 534 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 KELP23276 732 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 HTR1BP28222 390 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 ECHS1P30084 290 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 UGT1A3P35503 534 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 UGT1A5P35504 534 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 NBL1P41271 181 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 MAGEA4P43358 317 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 THOP1P52888 689 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 C21orf59P57076 290 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 PFN3P60673 137 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 CACNG1Q06432 222 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 NFATC2Q13469 925 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms