RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 PLXNA2O75051 1894 aa15.1■□□□□ 0.01
ATG4D-211ENST00000589753 ZNF106Q9H2Y7 1883 aaKnown RBP15.1■□□□□ 0.01
ATG4D-211ENST00000589753 PRAMEF26H0Y7S4 382 aa15.1■□□□□ 0.01
ATG4D-211ENST00000589753 GAPDHSO14556 408 aaPredicted RBP15.1■□□□□ 0.01
ATG4D-211ENST00000589753 FPGTO14772 594 aa15.1■□□□□ 0.01
ATG4D-211ENST00000589753 RHOBTB1O94844 696 aa15.1■□□□□ 0.01
ATG4D-211ENST00000589753 GOT2P00505 430 aaKnown RBP15.1■□□□□ 0.01
ATG4D-211ENST00000589753 PYGLP06737 847 aa15.1■□□□□ 0.01
ATG4D-211ENST00000589753 GSTA2P09210 222 aa15.1■□□□□ 0.01
ATG4D-211ENST00000589753 TSHRP16473 764 aa15.1■□□□□ 0.01
ATG4D-211ENST00000589753 ITGALP20701 1170 aa15.1■□□□□ 0.01
ATG4D-211ENST00000589753 PTGER3P43115 390 aa15.1■□□□□ 0.01
ATG4D-211ENST00000589753 GPR1P46091 355 aa15.1■□□□□ 0.01
ATG4D-211ENST00000589753 DHPSP49366 369 aaPredicted RBP15.1■□□□□ 0.01
ATG4D-211ENST00000589753 ITGA9Q13797 1035 aa15.1■□□□□ 0.01
ATG4D-211ENST00000589753 SIM2Q14190 667 aaPredicted RBP15.1■□□□□ 0.01
ATG4D-211ENST00000589753 CHRNA6Q15825 494 aa15.1■□□□□ 0.01
ATG4D-211ENST00000589753 LONRF1Q17RB8 773 aa15.1■□□□□ 0.01
ATG4D-211ENST00000589753 PDPK2PQ6A1A2 396 aa15.1■□□□□ 0.01
ATG4D-211ENST00000589753 PNCKQ6P2M8 343 aa15.1■□□□□ 0.01
ATG4D-211ENST00000589753 ZC3H14Q6PJT7 736 aaKnown RBP15.1■□□□□ 0.01
ATG4D-211ENST00000589753 CAPN12Q6ZSI9 719 aa15.1■□□□□ 0.01
ATG4D-211ENST00000589753 RGL4Q8IZJ4 473 aa15.1■□□□□ 0.01
ATG4D-211ENST00000589753 PLA2G15Q8NCC3 412 aa15.1■□□□□ 0.01
ATG4D-211ENST00000589753 OR4L1Q8NH43 312 aa15.1■□□□□ 0.01
ATG4D-211ENST00000589753 GSDMBQ8TAX9 411 aa15.1■□□□□ 0.01
ATG4D-211ENST00000589753 ZNF398Q8TD17 642 aa15.1■□□□□ 0.01
ATG4D-211ENST00000589753 SERAC1Q96JX3 654 aa15.1■□□□□ 0.01
ATG4D-211ENST00000589753 ZC3H10Q96K80 434 aaKnown RBP15.1■□□□□ 0.01
ATG4D-211ENST00000589753 TTC25Q96NG3 672 aa15.1■□□□□ 0.01
ATG4D-211ENST00000589753 AGAP2Q99490 1192 aa15.1■□□□□ 0.01
ATG4D-211ENST00000589753 ORAI3Q9BRQ5 295 aa15.1■□□□□ 0.01
ATG4D-211ENST00000589753 CDC42EP4Q9H3Q1 356 aaKnown RBP15.1■□□□□ 0.01
ATG4D-211ENST00000589753 PLAC1Q9HBJ0 212 aa15.1■□□□□ 0.01
ATG4D-211ENST00000589753 NINJ2Q9NZG7 142 aa15.1■□□□□ 0.01
ATG4D-211ENST00000589753 EIF2B4Q9UI10 523 aaKnown RBP15.1■□□□□ 0.01
ATG4D-211ENST00000589753 OR51F1A6NGY5 319 aa15.09■□□□□ 0.01
ATG4D-211ENST00000589753 K7ESM1 405 aa15.09■□□□□ 0.01
ATG4D-211ENST00000589753 SPAG6O75602 509 aa15.09■□□□□ 0.01
ATG4D-211ENST00000589753 MAOBP27338 520 aa15.09■□□□□ 0.01
ATG4D-211ENST00000589753 ARNTP27540 789 aa15.09■□□□□ 0.01
ATG4D-211ENST00000589753 SSTR1P30872 391 aa15.09■□□□□ 0.01
ATG4D-211ENST00000589753 IGFALSP35858 605 aa15.09■□□□□ 0.01
ATG4D-211ENST00000589753 ARCN1P48444 511 aaKnown RBP15.09■□□□□ 0.01
ATG4D-211ENST00000589753 PMS2P54278 862 aa15.09■□□□□ 0.01
ATG4D-211ENST00000589753 GPX6P59796 221 aa15.09■□□□□ 0.01
ATG4D-211ENST00000589753 CACNG1Q06432 222 aa15.09■□□□□ 0.01
ATG4D-211ENST00000589753 NFATC2Q13469 925 aa15.09■□□□□ 0.01
ATG4D-211ENST00000589753 FRG1Q14331 258 aaKnown RBP15.09■□□□□ 0.01
ATG4D-211ENST00000589753 INPP5AQ14642 412 aa15.09■□□□□ 0.01
ATG4D-211ENST00000589753 STAT4Q14765 748 aa15.09■□□□□ 0.01
ATG4D-211ENST00000589753 KYNUQ16719 465 aa15.09■□□□□ 0.01
ATG4D-211ENST00000589753 MAP9Q49MG5 647 aa15.09■□□□□ 0.01
ATG4D-211ENST00000589753 ATP13A5Q4VNC0 1218 aa15.09■□□□□ 0.01
ATG4D-211ENST00000589753 ZRANB3Q5FWF4 1079 aa15.09■□□□□ 0.01
ATG4D-211ENST00000589753 LYSMD4Q5XG99 296 aa15.09■□□□□ 0.01
ATG4D-211ENST00000589753 EMBQ6PCB8 327 aa15.09■□□□□ 0.01
ATG4D-211ENST00000589753 PRR23BQ6ZRT6 265 aa15.09■□□□□ 0.01
ATG4D-211ENST00000589753 C3orf62Q6ZUJ4 267 aa15.09■□□□□ 0.01
ATG4D-211ENST00000589753 MICALCLQ6ZW33 695 aa15.09■□□□□ 0.01
ATG4D-211ENST00000589753 SNX20Q7Z614 316 aa15.09■□□□□ 0.01
ATG4D-211ENST00000589753 PTAR1Q7Z6K3 402 aaPredicted RBP15.09■□□□□ 0.01
ATG4D-211ENST00000589753 PELI3Q8N2H9 469 aa15.09■□□□□ 0.01
ATG4D-211ENST00000589753 TMEM145Q8NBT3 493 aa15.09■□□□□ 0.01
ATG4D-211ENST00000589753 AENQ8WTP8 325 aaKnown RBP15.09■□□□□ 0.01
ATG4D-211ENST00000589753 DNASE2BQ8WZ79 361 aa15.09■□□□□ 0.01
ATG4D-211ENST00000589753 CERS2Q96G23 380 aa15.09■□□□□ 0.01
ATG4D-211ENST00000589753 SGSM3Q96HU1 749 aa15.09■□□□□ 0.01
ATG4D-211ENST00000589753 TXLNGYQ9BZA5 131 aa15.09■□□□□ 0.01
ATG4D-211ENST00000589753 MIR1-1HGQ9H1L0 117 aa15.09■□□□□ 0.01
ATG4D-211ENST00000589753 SEMA4AQ9H3S1 761 aa15.09■□□□□ 0.01
ATG4D-211ENST00000589753 ASB8Q9H765 288 aa15.09■□□□□ 0.01
ATG4D-211ENST00000589753 VPS37BQ9H9H4 285 aa15.09■□□□□ 0.01
ATG4D-211ENST00000589753 LRRC4CQ9HCJ2 640 aa15.09■□□□□ 0.01
ATG4D-211ENST00000589753 C20orf96Q9NUD7 363 aaPredicted RBP15.09■□□□□ 0.01
ATG4D-211ENST00000589753 CA5BQ9Y2D0 317 aa15.09■□□□□ 0.01
ATG4D-211ENST00000589753 HS3ST3A1Q9Y663 406 aa15.09■□□□□ 0.01
ATG4D-211ENST00000589753 CEP192Q8TEP8 1941 aa15.08■□□□□ 0
ATG4D-211ENST00000589753 FADS2P1A8MWK0 482 aa15.08■□□□□ 0
ATG4D-211ENST00000589753 GOLGA8KD6RF30 607 aa15.08■□□□□ 0
ATG4D-211ENST00000589753 GOLGA8TH3BQL2 631 aa15.08■□□□□ 0
ATG4D-211ENST00000589753 GPR39O43194 453 aa15.08■□□□□ 0
ATG4D-211ENST00000589753 UGT1A9O60656 530 aa15.08■□□□□ 0
ATG4D-211ENST00000589753 SOD1P00441 154 aa15.08■□□□□ 0
ATG4D-211ENST00000589753 UGT1A6P19224 532 aa15.08■□□□□ 0
ATG4D-211ENST00000589753 UGT1A1P22309 533 aa15.08■□□□□ 0
ATG4D-211ENST00000589753 UGT1A4P22310 534 aa15.08■□□□□ 0
ATG4D-211ENST00000589753 TEAD1P28347 426 aa15.08■□□□□ 0
ATG4D-211ENST00000589753 FOXN2P32314 431 aa15.08■□□□□ 0
ATG4D-211ENST00000589753 PHBP35232 272 aa15.08■□□□□ 0
ATG4D-211ENST00000589753 UGT1A3P35503 534 aa15.08■□□□□ 0
ATG4D-211ENST00000589753 UGT1A5P35504 534 aa15.08■□□□□ 0
ATG4D-211ENST00000589753 CLDN2P57739 230 aa15.08■□□□□ 0
ATG4D-211ENST00000589753 THOC5Q13769 683 aaKnown RBP15.08■□□□□ 0
ATG4D-211ENST00000589753 SMAD1Q15797 465 aaKnown RBP15.08■□□□□ 0
ATG4D-211ENST00000589753 GPR33Q49SQ1 333 aa15.08■□□□□ 0
ATG4D-211ENST00000589753 FASTKD1Q53R41 847 aaKnown RBP15.08■□□□□ 0
ATG4D-211ENST00000589753 ADAMTSL4Q6UY14 1074 aa15.08■□□□□ 0
ATG4D-211ENST00000589753 GCNT7Q6ZNI0 430 aa15.08■□□□□ 0
ATG4D-211ENST00000589753 TRMT10CQ7L0Y3 403 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms