RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 STC1P52823 247 aa19.24■□□□□ 0.67
TRAF4-216ENST00000586813 EPHB1P54762 984 aa19.24■□□□□ 0.67
TRAF4-216ENST00000586813 GPLD1P80108 840 aa19.24■□□□□ 0.67
TRAF4-216ENST00000586813 DSC2Q02487 901 aa19.24■□□□□ 0.67
TRAF4-216ENST00000586813 LRP8Q14114 963 aa19.24■□□□□ 0.67
TRAF4-216ENST00000586813 IHHQ14623 411 aa19.24■□□□□ 0.67
TRAF4-216ENST00000586813 NR1I3Q14994 352 aa19.24■□□□□ 0.67
TRAF4-216ENST00000586813 TBR1Q16650 682 aa19.24■□□□□ 0.67
TRAF4-216ENST00000586813 NCBP2-AS2Q69YL0 99 aa19.24■□□□□ 0.67
TRAF4-216ENST00000586813 MARK2Q7KZI7 788 aaKnown RBP19.24■□□□□ 0.67
TRAF4-216ENST00000586813 NLRP8Q86W28 1048 aa19.24■□□□□ 0.67
TRAF4-216ENST00000586813 GALNT13Q8IUC8 556 aa19.24■□□□□ 0.67
TRAF4-216ENST00000586813 CCDC112Q8NEF3 446 aa19.24■□□□□ 0.67
TRAF4-216ENST00000586813 MAML1Q92585 1016 aa19.24■□□□□ 0.67
TRAF4-216ENST00000586813 ART4Q93070 314 aa19.24■□□□□ 0.67
TRAF4-216ENST00000586813 NKD1Q969G9 470 aa19.24■□□□□ 0.67
TRAF4-216ENST00000586813 COX14Q96I36 57 aa19.24■□□□□ 0.67
TRAF4-216ENST00000586813 AGAP2Q99490 1192 aa19.24■□□□□ 0.67
TRAF4-216ENST00000586813 DPYSL5Q9BPU6 564 aa19.24■□□□□ 0.67
TRAF4-216ENST00000586813 NUP85Q9BW27 656 aa19.24■□□□□ 0.67
TRAF4-216ENST00000586813 TDRD1Q9BXT4 1180 aaKnown RBP19.24■□□□□ 0.67
TRAF4-216ENST00000586813 TMEM9Q9P0T7 183 aa19.24■□□□□ 0.67
TRAF4-216ENST00000586813 BZW2Q9Y6E2 419 aaKnown RBP19.24■□□□□ 0.67
TRAF4-216ENST00000586813 TLN1Q9Y490 2541 aaKnown RBP19.24■□□□□ 0.67
TRAF4-216ENST00000586813 INPP4BO15327 924 aa19.23■□□□□ 0.67
TRAF4-216ENST00000586813 SERPINC1P01008 464 aa19.23■□□□□ 0.67
TRAF4-216ENST00000586813 CYP1A2P05177 515 aa19.23■□□□□ 0.67
TRAF4-216ENST00000586813 SFTPCP11686 197 aa19.23■□□□□ 0.67
TRAF4-216ENST00000586813 CSTF2P33240 577 aaKnown RBP eCLIP19.23■□□□□ 0.67
TRAF4-216ENST00000586813 NFKB2Q00653 900 aa19.23■□□□□ 0.67
TRAF4-216ENST00000586813 TIGD7Q6NT04 549 aaPredicted RBP19.23■□□□□ 0.67
TRAF4-216ENST00000586813 ZNF761Q86XN6 746 aaPredicted RBP19.23■□□□□ 0.67
TRAF4-216ENST00000586813 NRSN1Q8IZ57 195 aa19.23■□□□□ 0.67
TRAF4-216ENST00000586813 SFRP1Q8N474 314 aa19.23■□□□□ 0.67
TRAF4-216ENST00000586813 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.23■□□□□ 0.67
TRAF4-216ENST00000586813 EXD1Q8NHP7 514 aa19.23■□□□□ 0.67
TRAF4-216ENST00000586813 SLC37A2Q8TED4 501 aa19.23■□□□□ 0.67
TRAF4-216ENST00000586813 FUCA2Q9BTY2 467 aa19.23■□□□□ 0.67
TRAF4-216ENST00000586813 RIOK2Q9BVS4 552 aaKnown RBP19.23■□□□□ 0.67
TRAF4-216ENST00000586813 DDA1Q9BW61 102 aa19.23■□□□□ 0.67
TRAF4-216ENST00000586813 TRIM4Q9C037 500 aa19.23■□□□□ 0.67
TRAF4-216ENST00000586813 ZMYND15Q9H091 742 aa19.23■□□□□ 0.67
TRAF4-216ENST00000586813 DNPEPQ9ULA0 475 aa19.23■□□□□ 0.67
TRAF4-216ENST00000586813 CHKBQ9Y259 395 aa19.23■□□□□ 0.67
TRAF4-216ENST00000586813 TTLL3Q9Y4R7 772 aa19.23■□□□□ 0.67
TRAF4-216ENST00000586813 B3GALT1Q9Y5Z6 326 aa19.23■□□□□ 0.67
TRAF4-216ENST00000586813 MAP3K6O95382 1288 aa19.22■□□□□ 0.67
TRAF4-216ENST00000586813 SSR1P43307 286 aaKnown RBP19.22■□□□□ 0.67
TRAF4-216ENST00000586813 ARSEP51690 589 aa19.22■□□□□ 0.67
TRAF4-216ENST00000586813 DPYSL3Q14195 570 aa19.22■□□□□ 0.67
TRAF4-216ENST00000586813 PAFAH1B3Q15102 231 aaKnown RBP19.22■□□□□ 0.67
TRAF4-216ENST00000586813 CCDC122Q5T0U0 273 aa19.22■□□□□ 0.67
TRAF4-216ENST00000586813 TMEM71Q6P5X7 295 aa19.22■□□□□ 0.67
TRAF4-216ENST00000586813 SYN2Q92777 582 aaPredicted RBP19.22■□□□□ 0.67
TRAF4-216ENST00000586813 FATE1Q969F0 183 aa19.22■□□□□ 0.67
TRAF4-216ENST00000586813 SLC38A3Q99624 504 aa19.22■□□□□ 0.67
TRAF4-216ENST00000586813 SLC12A9Q9BXP2 914 aa19.22■□□□□ 0.67
TRAF4-216ENST00000586813 HAUS2Q9NVX0 235 aa19.22■□□□□ 0.67
TRAF4-216ENST00000586813 PCYT1BQ9Y5K3 369 aaPredicted RBP19.22■□□□□ 0.67
TRAF4-216ENST00000586813 A0A087X0T9 212 aa19.21■□□□□ 0.67
TRAF4-216ENST00000586813 A0A1W2PQJ5 194 aa19.21■□□□□ 0.67
TRAF4-216ENST00000586813 B4E171 279 aa19.21■□□□□ 0.67
TRAF4-216ENST00000586813 MYO1FO00160 1098 aa19.21■□□□□ 0.67
TRAF4-216ENST00000586813 MATN3O15232 486 aa19.21■□□□□ 0.67
TRAF4-216ENST00000586813 DUX1O43812 170 aa19.21■□□□□ 0.67
TRAF4-216ENST00000586813 ASMTLO95671 621 aa19.21■□□□□ 0.67
TRAF4-216ENST00000586813 EML2O95834 649 aa19.21■□□□□ 0.67
TRAF4-216ENST00000586813 PRLP01236 227 aa19.21■□□□□ 0.67
TRAF4-216ENST00000586813 SERPING1P05155 500 aa19.21■□□□□ 0.67
TRAF4-216ENST00000586813 FAM228BP0C875 321 aa19.21■□□□□ 0.67
TRAF4-216ENST00000586813 CA4P22748 312 aa19.21■□□□□ 0.67
TRAF4-216ENST00000586813 CES1P23141 567 aa19.21■□□□□ 0.67
TRAF4-216ENST00000586813 UGT1A3P35503 534 aa19.21■□□□□ 0.67
TRAF4-216ENST00000586813 TSPAN7P41732 249 aa19.21■□□□□ 0.67
TRAF4-216ENST00000586813 CSRP3P50461 194 aa19.21■□□□□ 0.67
TRAF4-216ENST00000586813 CLCA4Q14CN2 919 aa19.21■□□□□ 0.67
TRAF4-216ENST00000586813 IQCB1Q15051 598 aa19.21■□□□□ 0.67
TRAF4-216ENST00000586813 IFI16Q16666 785 aaKnown RBP19.21■□□□□ 0.67
TRAF4-216ENST00000586813 HADHQ16836 314 aaKnown RBP19.21■□□□□ 0.67
TRAF4-216ENST00000586813 FAM129CQ86XR2 697 aa19.21■□□□□ 0.67
TRAF4-216ENST00000586813 RAVER1Q8IY67 606 aaKnown RBP19.21■□□□□ 0.67
TRAF4-216ENST00000586813 IL22RA1Q8N6P7 574 aa19.21■□□□□ 0.67
TRAF4-216ENST00000586813 LPCAT1Q8NF37 534 aa19.21■□□□□ 0.67
TRAF4-216ENST00000586813 OR10G6Q8NH81 332 aa19.21■□□□□ 0.67
TRAF4-216ENST00000586813 ARRDC2Q8TBH0 407 aa19.21■□□□□ 0.67
TRAF4-216ENST00000586813 AHCYL2Q96HN2 611 aaKnown RBP19.21■□□□□ 0.67
TRAF4-216ENST00000586813 ZNF670Q9BS34 389 aa19.21■□□□□ 0.67
TRAF4-216ENST00000586813 RBM22Q9NW64 420 aaKnown RBP eCLIP19.21■□□□□ 0.672e-8■□□□□ 8.6
TRAF4-216ENST00000586813 OCIAD1Q9NX40 245 aa19.21■□□□□ 0.67
TRAF4-216ENST00000586813 SLC39A1Q9NY26 324 aa19.21■□□□□ 0.67
TRAF4-216ENST00000586813 VPS18Q9P253 973 aa19.21■□□□□ 0.67
TRAF4-216ENST00000586813 PDP2Q9P2J9 529 aa19.21■□□□□ 0.67
TRAF4-216ENST00000586813 AMACRQ9UHK6 382 aa19.21■□□□□ 0.67
TRAF4-216ENST00000586813 SPTA1P02549 2419 aa19.21■□□□□ 0.67
TRAF4-216ENST00000586813 ZNF106Q9H2Y7 1883 aaKnown RBP19.2■□□□□ 0.66
TRAF4-216ENST00000586813 TRBV23OR9-2A0A075B6M9 112 aa19.2■□□□□ 0.66
TRAF4-216ENST00000586813 EFCAB7A8K855 629 aa19.2■□□□□ 0.66
TRAF4-216ENST00000586813 TERTO14746 1132 aaKnown RBP19.2■□□□□ 0.66
TRAF4-216ENST00000586813 DNAJC6O75061 913 aa19.2■□□□□ 0.66
TRAF4-216ENST00000586813 CLDN7O95471 211 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms