RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 GPR89BP0CG08 455 aa10.35□□□□□ -0.75
CCDC47-203ENST00000580986 PFN3P60673 137 aa10.35□□□□□ -0.75
CCDC47-203ENST00000580986 XIAPP98170 497 aa10.35□□□□□ -0.75
CCDC47-203ENST00000580986 TCF15Q12870 199 aa10.35□□□□□ -0.75
CCDC47-203ENST00000580986 ILF2Q12905 390 aaKnown RBP10.35□□□□□ -0.75
CCDC47-203ENST00000580986 PDIA2Q13087 525 aaKnown RBP10.35□□□□□ -0.75
CCDC47-203ENST00000580986 SEPT6Q14141 434 aa10.35□□□□□ -0.75
CCDC47-203ENST00000580986 CRYMQ14894 314 aa10.35□□□□□ -0.75
CCDC47-203ENST00000580986 WSCD2Q2TBF2 565 aa10.35□□□□□ -0.75
CCDC47-203ENST00000580986 BBS9Q3SYG4 887 aa10.35□□□□□ -0.75
CCDC47-203ENST00000580986 ANKRD20A4Q4UJ75 823 aa10.35□□□□□ -0.75
CCDC47-203ENST00000580986 LYSMD4Q5XG99 296 aa10.35□□□□□ -0.75
CCDC47-203ENST00000580986 CASC4Q6P4E1 433 aa10.35□□□□□ -0.75
CCDC47-203ENST00000580986 AFTPHQ6ULP2 937 aa10.35□□□□□ -0.75
CCDC47-203ENST00000580986 ADAMTSL4Q6UY14 1074 aa10.35□□□□□ -0.75
CCDC47-203ENST00000580986 DCP2Q8IU60 420 aaKnown RBP10.35□□□□□ -0.75
CCDC47-203ENST00000580986 CNPY4Q8N129 248 aa10.35□□□□□ -0.75
CCDC47-203ENST00000580986 OR13C4Q8NGS5 318 aa10.35□□□□□ -0.75
CCDC47-203ENST00000580986 GABPB2Q8TAK5 448 aaPredicted RBP10.35□□□□□ -0.75
CCDC47-203ENST00000580986 PYROXD1Q8WU10 500 aa10.35□□□□□ -0.75
CCDC47-203ENST00000580986 IFT81Q8WYA0 676 aa10.35□□□□□ -0.75
CCDC47-203ENST00000580986 AP2M1Q96CW1 435 aa10.35□□□□□ -0.75
CCDC47-203ENST00000580986 DNAJC1Q96KC8 554 aaKnown RBP10.35□□□□□ -0.75
CCDC47-203ENST00000580986 ZNF778Q96MU6 729 aa10.35□□□□□ -0.75
CCDC47-203ENST00000580986 TTC25Q96NG3 672 aa10.35□□□□□ -0.75
CCDC47-203ENST00000580986 WDR83Q9BRX9 315 aaKnown RBP10.35□□□□□ -0.75
CCDC47-203ENST00000580986 ABCG8Q9H221 673 aa10.35□□□□□ -0.75
CCDC47-203ENST00000580986 EBF2Q9HAK2 575 aa10.35□□□□□ -0.75
CCDC47-203ENST00000580986 IL26Q9NPH9 171 aa10.35□□□□□ -0.75
CCDC47-203ENST00000580986 CHRAC1Q9NRG0 131 aa10.35□□□□□ -0.75
CCDC47-203ENST00000580986 PCDHGA5Q9Y5G8 931 aa10.35□□□□□ -0.75
CCDC47-203ENST00000580986 RPS6KL1Q9Y6S9 549 aa10.35□□□□□ -0.75
CCDC47-203ENST00000580986 FAM169AQ9Y6X4 670 aa10.35□□□□□ -0.75
CCDC47-203ENST00000580986 THADAQ6YHU6 1953 aa10.35□□□□□ -0.75
CCDC47-203ENST00000580986 PRR23AA6NEV1 266 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 A6NNZ2 444 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 MEI4A8MW99 385 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 A8MX80 341 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 FPGTO14772 594 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 CTIFO43310 598 aaKnown RBP10.34□□□□□ -0.75
CCDC47-203ENST00000580986 SRP72O76094 671 aaKnown RBP10.34□□□□□ -0.75
CCDC47-203ENST00000580986 FSBPO95073 299 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 PRAMEF1O95521 474 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 SOD1P00441 154 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 ITGALP20701 1170 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 ARNTP27540 789 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 IGFALSP35858 605 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 PPARGP37231 505 aaPredicted RBP10.34□□□□□ -0.75
CCDC47-203ENST00000580986 NBL1P41271 181 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 ELK3P41970 407 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 MAGEA4P43358 317 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 RABIFP47224 123 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 ARCN1P48444 511 aaKnown RBP10.34□□□□□ -0.75
CCDC47-203ENST00000580986 TERF1P54274 439 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 PRAMEP78395 509 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 CRADDP78560 199 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 SEMG2Q02383 582 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 CACNG1Q06432 222 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 NFATC2Q13469 925 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 PEX6Q13608 980 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 SIM2Q14190 667 aaPredicted RBP10.34□□□□□ -0.75
CCDC47-203ENST00000580986 IRF4Q15306 451 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 ERCC6LQ2NKX8 1250 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 AARS2Q5JTZ9 985 aaKnown RBP10.34□□□□□ -0.75
CCDC47-203ENST00000580986 PNCKQ6P2M8 343 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 CERS6Q6ZMG9 384 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 CCNI2Q6ZMN8 369 aaPredicted RBP10.34□□□□□ -0.75
CCDC47-203ENST00000580986 CEP68Q76N32 757 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 SNX20Q7Z614 316 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 GALNT7Q86SF2 657 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 SYT12Q8IV01 421 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 ZBED8Q8IZ13 594 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 MFSD2AQ8NA29 543 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.34□□□□□ -0.75
CCDC47-203ENST00000580986 FBXO36Q8NEA4 188 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 PRSS33Q8NF86 280 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 GPR150Q8NGU9 434 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 GSDMBQ8TAX9 411 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 CALML6Q8TD86 181 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 HEXDCQ8WVB3 486 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 ULK4Q96C45 1275 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 MFSD3Q96ES6 412 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 COX14Q96I36 57 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 TEX101Q9BY14 249 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 FUT8Q9BYC5 575 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 ZC3H7BQ9UGR2 993 aaKnown RBP10.34□□□□□ -0.75
CCDC47-203ENST00000580986 PILRBQ9UKJ0 227 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 NFU1Q9UMS0 254 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 INVSQ9Y283 1065 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 COQ6Q9Y2Z9 468 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 MAD1L1Q9Y6D9 718 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 SLC30A1Q9Y6M5 507 aa10.34□□□□□ -0.75
CCDC47-203ENST00000580986 CACNA1HO95180 2353 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 IGLV3-16A0A075B6K0 115 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 A0A0U1RQS6 177 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 A0A1B0GTW7 788 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 RAD51BO15315 384 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 SLC31A1O15431 190 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 MAP3K7O43318 606 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms