RNA–Protein interactions for RNA: ENST00000577721.5

SMARCE1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-212ENST00000577721 IGLV1-40P01703 118 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 DESP17661 470 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 GPD1P21695 349 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 AK4P27144 223 aaPredicted RBP6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 MAP4P27816 1152 aaKnown RBP6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 TRIM23P36406 574 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 PTPN9P43378 593 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 GPR3P46089 330 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 SCNN1BP51168 640 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 LIMK2P53671 638 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 HDAC4P56524 1084 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 CAMK4Q16566 473 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 HSP90AA4PQ58FG1 418 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 ANKS6Q68DC2 871 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 ATCAYQ86WG3 371 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 ZSWIM9Q86XI8 627 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 ZNF677Q86XU0 584 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 UNC5BQ8IZJ1 945 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 NLGN4XQ8N0W4 816 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 TSEN2Q8NCE0 465 aaKnown RBP6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 NLGN4YQ8NFZ3 816 aaPredicted RBP6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 OR4D9Q8NGE8 314 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 PDCD6IPQ8WUM4 868 aaKnown RBP6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 SLC20A1Q8WUM9 679 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 APOBEC4Q8WW27 367 aaKnown RBP6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 PATE1Q8WXA2 126 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 CENPIQ92674 756 aaPredicted RBP6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 PMEPA1Q969W9 287 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 NTAN1Q96AB6 310 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 CELF6Q96J87 481 aaKnown RBP6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 SLC45A3Q96JT2 553 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 SLC38A3Q99624 504 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 CTRCQ99895 268 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 DPYSL5Q9BPU6 564 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 TUBGCP2Q9BSJ2 902 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 EFHD1Q9BUP0 239 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 DDA1Q9BW61 102 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 CINPQ9BW66 212 aaPredicted RBP6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 STK33Q9BYT3 514 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 AKTIPQ9H8T0 292 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 SLC24A3Q9HC58 644 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 SEPT11Q9NVA2 429 aaKnown RBP6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 OCIAD1Q9NX40 245 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 DONSONQ9NYP3 566 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 ADAM22Q9P0K1 906 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 PCDHGA3Q9Y5H0 932 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 KALRNO60229 2985 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 COL6A6A6NMZ7 2263 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 MGAQ8IWI9 3026 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 IGHV1OR21-1A0A087WYE8 117 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 LOC101059948A0A1B0GTJ6 334 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 PRR19A6NJB7 356 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 WASH4PA8MWX3 477 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 DFFAO00273 331 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 DUX1O43812 170 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 PRAMEF11O60813 436 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 GADD45BO75293 160 aaPredicted RBP6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 MYCLP1P12525 358 aaPredicted RBP6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 UCHL3P15374 230 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 TCN2P20062 427 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 MMP8P22894 467 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 ERCC5P28715 1186 aaPredicted RBP6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 MAN1A1P33908 653 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 RFC1P35251 1148 aaPredicted RBP6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 ACTR1BP42025 376 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 POLD2P49005 469 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 PAPOLAP51003 745 aaKnown RBP6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 ARSDP51689 593 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 NDST2P52849 883 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 COPB1P53618 953 aaKnown RBP6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 TPI1P60174 286 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 ACTR1AP61163 376 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 MC1RQ01726 317 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 CDR2Q01850 454 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 CDC20Q12834 499 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 RALGDSQ12967 914 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 SYCP1Q15431 976 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 LACTB2Q53H82 288 aaPredicted RBP6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 AFMIDQ63HM1 303 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 RAET1GQ6H3X3 334 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 TMEM71Q6P5X7 295 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 WDR59Q6PJI9 974 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 DOK6Q6PKX4 331 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 DPPA4Q7L190 304 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 ZNF438Q7Z4V0 828 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 HEATR4Q86WZ0 1026 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 ZNF761Q86XN6 746 aaPredicted RBP6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 NRROSQ86YC3 692 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 UMODL1-AS1Q8N2C9 162 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 TEX19Q8NA77 164 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 MLKLQ8NB16 471 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 OR10G6Q8NH81 332 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 NCSTNQ92542 709 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 NUS1Q96E22 293 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 SLC39A8Q9C0K1 460 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 SP110Q9HB58 689 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 TRNAU1APQ9NX07 287 aaKnown RBP6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 KCTD5Q9NXV2 234 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 TMEM9Q9P0T7 183 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 FZD10Q9ULW2 581 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms