RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 GRK3P35626 688 aa13.08□□□□□ -0.32
PCDHGB3-201ENST00000576222 ETV4P43268 484 aa13.08□□□□□ -0.32
PCDHGB3-201ENST00000576222 CLCQ05315 142 aa13.08□□□□□ -0.32
PCDHGB3-201ENST00000576222 LCP2Q13094 533 aa13.08□□□□□ -0.32
PCDHGB3-201ENST00000576222 CEACAM7Q14002 265 aa13.08□□□□□ -0.32
PCDHGB3-201ENST00000576222 AP5B1Q2VPB7 878 aa13.08□□□□□ -0.32
PCDHGB3-201ENST00000576222 ADCK2Q7Z695 626 aa13.08□□□□□ -0.32
PCDHGB3-201ENST00000576222 LDB1Q86U70 411 aaPredicted RBP13.08□□□□□ -0.32
PCDHGB3-201ENST00000576222 CLEC4DQ8WXI8 215 aa13.08□□□□□ -0.32
PCDHGB3-201ENST00000576222 COPS5Q92905 334 aa13.08□□□□□ -0.32
PCDHGB3-201ENST00000576222 FBXL20Q96IG2 436 aa13.08□□□□□ -0.32
PCDHGB3-201ENST00000576222 NIFKQ9BYG3 293 aaKnown RBP13.08□□□□□ -0.32
PCDHGB3-201ENST00000576222 MTRRQ9UBK8 725 aa13.08□□□□□ -0.32
PCDHGB3-201ENST00000576222 NOBOXO60393 691 aa13.08□□□□□ -0.32
PCDHGB3-201ENST00000576222 NBNO60934 754 aa13.08□□□□□ -0.32
PCDHGB3-201ENST00000576222 RSL1D1O76021 490 aaKnown RBP13.08□□□□□ -0.32
PCDHGB3-201ENST00000576222 STAU1O95793 577 aaKnown RBP13.08□□□□□ -0.32
PCDHGB3-201ENST00000576222 DHRS4L1P0CG22 281 aa13.08□□□□□ -0.32
PCDHGB3-201ENST00000576222 RAP2AP10114 183 aa13.08□□□□□ -0.32
PCDHGB3-201ENST00000576222 TGFBIQ15582 683 aa13.08□□□□□ -0.32
PCDHGB3-201ENST00000576222 INTS6LQ5JSJ4 861 aaKnown RBP13.08□□□□□ -0.32
PCDHGB3-201ENST00000576222 SVOPLQ8N434 492 aa13.08□□□□□ -0.32
PCDHGB3-201ENST00000576222 OR4L1Q8NH43 312 aa13.08□□□□□ -0.32
PCDHGB3-201ENST00000576222 BHMTQ93088 406 aa13.08□□□□□ -0.32
PCDHGB3-201ENST00000576222 AKT1S1Q96B36 256 aa13.08□□□□□ -0.32
PCDHGB3-201ENST00000576222 ZDHHC7Q9NXF8 308 aa13.08□□□□□ -0.32
PCDHGB3-201ENST00000576222 UXTQ9UBK9 157 aaPredicted RBP13.08□□□□□ -0.32
PCDHGB3-201ENST00000576222 SERPINA1P01009 418 aa13.08□□□□□ -0.32
PCDHGB3-201ENST00000576222 LGALS2P05162 132 aa13.08□□□□□ -0.32
PCDHGB3-201ENST00000576222 EPB42P16452 691 aa13.08□□□□□ -0.32
PCDHGB3-201ENST00000576222 HSDL1Q3SXM5 330 aa13.08□□□□□ -0.32
PCDHGB3-201ENST00000576222 PLET1Q6UQ28 207 aa13.08□□□□□ -0.32
PCDHGB3-201ENST00000576222 TMEM86AQ8N2M4 240 aa13.08□□□□□ -0.32
PCDHGB3-201ENST00000576222 KCNK13Q9HB14 408 aa13.08□□□□□ -0.32
PCDHGB3-201ENST00000576222 SAMD4AQ9UPU9 718 aaKnown RBP13.08□□□□□ -0.32
PCDHGB3-201ENST00000576222 C17orf102A2RUQ5 167 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 GPR25O00155 361 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 SLC28A1O00337 649 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 RFXANKO14593 260 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 MT-CYBP00156 380 aaPredicted RBP13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 GLUD2P49448 558 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 ELP6Q0PNE2 266 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 TMEM132BQ14DG7 1078 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 FAM91A1Q658Y4 838 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 DNAJB3Q8WWF6 145 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 COLEC11Q9BWP8 271 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 GBA2Q9HCG7 927 aaPredicted RBP13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 PDP1Q9P0J1 537 aaPredicted RBP13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 NENFQ9UMX5 172 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 RIPK3Q9Y572 518 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 ALDOAP04075 364 aaKnown RBP13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 CYBBP04839 570 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 AXLP30530 894 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 GRM5P41594 1212 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 CDH18Q13634 790 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 NFE2Q16621 373 aaPredicted RBP13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 FBXO48Q5FWF7 155 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 ZNF544Q6NX49 715 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 ANKS3Q6ZW76 656 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 ADAMTSL2Q86TH1 951 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 SMG8Q8ND04 991 aaKnown RBP13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 OR9I1Q8NGQ6 314 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 LRRC58Q96CX6 371 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 FIZ1Q96SL8 496 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 ARL15Q9NXU5 204 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 ACTR3BQ9P1U1 418 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 ZNF624Q9P2J8 865 aaPredicted RBP13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 OGDHLQ9ULD0 1010 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 H0Y858 1186 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 SNNO75324 88 aaPredicted RBP13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 PGLSO95336 258 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 BMP10O95393 424 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 TTPAP49638 278 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 ATAD3BQ5T9A4 648 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 AFTPHQ6ULP2 937 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 EIF3MQ7L2H7 374 aaKnown RBP13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 PLD6Q8N2A8 252 aaKnown RBP13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 ATP13A1Q9HD20 1204 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 ING3Q9NXR8 418 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 ZNHIT2Q9UHR6 403 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 LSM7Q9UK45 103 aaKnown RBP13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 CARD8Q9Y2G2 431 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 PEX16Q9Y5Y5 336 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 FARP2O94887 1054 aaPredicted RBP13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 DGKAP23743 735 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 CRY1Q16526 586 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 TMEM53Q6P2H8 277 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 EPHX4Q8IUS5 362 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 DCBLD1Q8N8Z6 715 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 LINGO1Q96FE5 620 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 ITCHQ96J02 903 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 CHCHD6Q9BRQ6 235 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 MLPHQ9BV36 600 aaPredicted RBP13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 DNAJB9Q9UBS3 223 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 HMGXB4Q9UGU5 601 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 MOSPD1Q9UJG1 213 aa13.07□□□□□ -0.32
PCDHGB3-201ENST00000576222 ARFGEF2Q9Y6D5 1785 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 KRT87PA6NCN2 255 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 K7EPI3 171 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 HAT1O14929 419 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms