RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 NOD1Q9Y239 953 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 SLC27A5Q9Y2P5 690 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 SPO11Q9Y5K1 396 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 LCHNA4D1U4 455 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 AQP12BA6NM10 295 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 FXYD1O00168 92 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 VPS4BO75351 444 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 RHOBTB1O94844 696 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 STAMBPO95630 424 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 RPS17P08708 135 aaKnown RBP8.91□□□□□ -0.98
NCBP3-204ENST00000574911 HSD17B1P14061 328 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 GFAPP14136 432 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 ATP6V1B1P15313 513 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 HOXD9P28356 352 aaPredicted RBP8.91□□□□□ -0.98
NCBP3-204ENST00000574911 EEF1DP29692 281 aaKnown RBP8.91□□□□□ -0.98
NCBP3-204ENST00000574911 CCND3P30281 292 aaPredicted RBP8.91□□□□□ -0.98
NCBP3-204ENST00000574911 MRPL19P49406 292 aaKnown RBP8.91□□□□□ -0.98
NCBP3-204ENST00000574911 TTC3P53804 2025 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 INHBEP58166 350 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 ATP6V0D1P61421 351 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 CLCQ05315 142 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 LCP2Q13094 533 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 MTA1Q13330 715 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 VPS26BQ4G0F5 336 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 COQ5Q5HYK3 327 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 PPP4R4Q6NUP7 873 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 BORAQ6PGQ7 559 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 PAQR3Q6TCH7 311 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 B3GNT6Q6ZMB0 384 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 ERMP1Q7Z2K6 904 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 AQP12AQ8IXF9 295 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 ZFP28Q8NHY6 868 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.91□□□□□ -0.98
NCBP3-204ENST00000574911 CRISPLD1Q9H336 500 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 SDR39U1Q9NRG7 319 aaPredicted RBP8.91□□□□□ -0.98
NCBP3-204ENST00000574911 CMTM6Q9NX76 183 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 ACTL7AQ9Y615 435 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 TANC1Q9C0D5 1861 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 A0A0D9SEW6 157 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 A0A1B0GTL3 188 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 MTMR11A4FU01 709 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 FAM155AB1AL88 458 aaPredicted RBP8.9□□□□□ -0.98
NCBP3-204ENST00000574911 HTRA2O43464 458 aaPredicted RBP8.9□□□□□ -0.98
NCBP3-204ENST00000574911 KLK8O60259 260 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 ECI2O75521 394 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 TIPRLO75663 272 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 LINC00032P0C843 101 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 SPATA31D3P0C874 917 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 PRR35P0CG20 571 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 CKBP12277 381 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 FMO4P31512 558 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 GRIA3P42263 894 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 FLT3LGP49771 235 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 KPNA1P52294 538 aaPredicted RBP8.9□□□□□ -0.98
NCBP3-204ENST00000574911 NR1H2P55055 460 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 FCGRTP55899 365 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 PRKCQQ04759 706 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 FOXM1Q08050 763 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 MBTPS1Q14703 1052 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 MAP7D1Q3KQU3 841 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.9□□□□□ -0.98
NCBP3-204ENST00000574911 AFTPHQ6ULP2 937 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 SPATA31D4Q6ZUB0 917 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 SPATA19Q7Z5L4 167 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 DDIASQ8IXT1 998 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 SLC15A3Q8IY34 581 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 LGI2Q8N0V4 545 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 CFAP52Q8N1V2 620 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 FBXO39Q8N4B4 442 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 GOLM1Q8NBJ4 401 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 FAM110BQ8TC76 370 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 CANT1Q8WVQ1 401 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 TUBGCP3Q96CW5 907 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 MPP4Q96JB8 637 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 FAM193BQ96PV7 902 aaPredicted RBP8.9□□□□□ -0.98
NCBP3-204ENST00000574911 C1QTNF3Q9BXJ4 246 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 TRIM15Q9C019 465 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 MAGEH1Q9H213 219 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 CCSER2Q9H7U1 834 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 DUS2Q9NX74 493 aaKnown RBP8.9□□□□□ -0.98
NCBP3-204ENST00000574911 RNF112Q9ULX5 631 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 DMTF1Q9Y222 760 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 GPR45Q9Y5Y3 372 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 ANKRD36A6QL64 1941 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 A0A1B0GTW7 788 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 SUPT3HB4E1H0 165 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 F5H5T6 163 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 ANGPT2O15123 496 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 SUPT3HO75486 399 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 HGFP14210 728 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 IDO1P14902 403 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 SLC6A4P31645 630 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 KCNQ1P51787 676 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 GNA12Q03113 381 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 RAD51Q06609 339 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 BNIP2Q12982 314 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 GEN1Q17RS7 908 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 SPATS1Q496A3 300 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 NHSL2Q5HYW2 709 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 FAM171A1Q5VUB5 890 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms