RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 FGF3P11487 239 aaPredicted RBP15.13■□□□□ 0.01
CTNS-209ENST00000574776 WT1P19544 449 aaPredicted RBP15.13■□□□□ 0.01
CTNS-209ENST00000574776 CES1P23141 567 aa15.13■□□□□ 0.01
CTNS-209ENST00000574776 CCNCP24863 283 aa15.13■□□□□ 0.01
CTNS-209ENST00000574776 CD82P27701 267 aa15.13■□□□□ 0.01
CTNS-209ENST00000574776 STC1P52823 247 aa15.13■□□□□ 0.01
CTNS-209ENST00000574776 LIMK2P53671 638 aa15.13■□□□□ 0.01
CTNS-209ENST00000574776 UBASH3AP57075 661 aa15.13■□□□□ 0.01
CTNS-209ENST00000574776 CYP4F2P78329 520 aa15.13■□□□□ 0.01
CTNS-209ENST00000574776 ZBED6P86452 979 aa15.13■□□□□ 0.01
CTNS-209ENST00000574776 PAFAH1B3Q15102 231 aaKnown RBP15.13■□□□□ 0.01
CTNS-209ENST00000574776 ANKRD20A8PQ5CZ79 823 aa15.13■□□□□ 0.01
CTNS-209ENST00000574776 NCBP2-AS2Q69YL0 99 aa15.13■□□□□ 0.01
CTNS-209ENST00000574776 ZSCAN1Q8NBB4 408 aa15.13■□□□□ 0.01
CTNS-209ENST00000574776 EXD1Q8NHP7 514 aa15.13■□□□□ 0.01
CTNS-209ENST00000574776 TAAR9Q96RI9 348 aa15.13■□□□□ 0.01
CTNS-209ENST00000574776 B3GNT4Q9C0J1 378 aa15.13■□□□□ 0.01
CTNS-209ENST00000574776 CBX8Q9HC52 389 aa15.13■□□□□ 0.01
CTNS-209ENST00000574776 KCNK4Q9NYG8 393 aa15.13■□□□□ 0.01
CTNS-209ENST00000574776 ZNHIT2Q9UHR6 403 aa15.13■□□□□ 0.01
CTNS-209ENST00000574776 CAPN11Q9UMQ6 739 aa15.13■□□□□ 0.01
CTNS-209ENST00000574776 TTLL3Q9Y4R7 772 aa15.13■□□□□ 0.01
CTNS-209ENST00000574776 PCDHGA4Q9Y5G9 962 aa15.13■□□□□ 0.01
CTNS-209ENST00000574776 IGHV1OR21-1A0A087WYE8 117 aa15.12■□□□□ 0.01
CTNS-209ENST00000574776 SLC28A2O43868 658 aa15.12■□□□□ 0.01
CTNS-209ENST00000574776 ZNF30P17039 623 aa15.12■□□□□ 0.01
CTNS-209ENST00000574776 NIPAL4Q0D2K0 466 aa15.12■□□□□ 0.01
CTNS-209ENST00000574776 NFATC3Q12968 1075 aa15.12■□□□□ 0.01
CTNS-209ENST00000574776 SQSTM1Q13501 440 aa15.12■□□□□ 0.01
CTNS-209ENST00000574776 IFI16Q16666 785 aaKnown RBP15.12■□□□□ 0.01
CTNS-209ENST00000574776 ALG1LQ6GMV1 187 aa15.12■□□□□ 0.01
CTNS-209ENST00000574776 TIGD7Q6NT04 549 aaPredicted RBP15.12■□□□□ 0.01
CTNS-209ENST00000574776 ZNF765Q7L2R6 523 aa15.12■□□□□ 0.01
CTNS-209ENST00000574776 LUZP1Q86V48 1076 aa15.12■□□□□ 0.01
CTNS-209ENST00000574776 ZNF761Q86XN6 746 aaPredicted RBP15.12■□□□□ 0.01
CTNS-209ENST00000574776 GALNT13Q8IUC8 556 aa15.12■□□□□ 0.01
CTNS-209ENST00000574776 NRSN1Q8IZ57 195 aa15.12■□□□□ 0.01
CTNS-209ENST00000574776 OR4D9Q8NGE8 314 aa15.12■□□□□ 0.01
CTNS-209ENST00000574776 ARRDC2Q8TBH0 407 aa15.12■□□□□ 0.01
CTNS-209ENST00000574776 PMEPA1Q969W9 287 aa15.12■□□□□ 0.01
CTNS-209ENST00000574776 COX14Q96I36 57 aa15.12■□□□□ 0.01
CTNS-209ENST00000574776 TSGA13Q96PP4 275 aa15.12■□□□□ 0.01
CTNS-209ENST00000574776 TDRD1Q9BXT4 1180 aaKnown RBP15.12■□□□□ 0.01
CTNS-209ENST00000574776 TMEM9Q9P0T7 183 aa15.12■□□□□ 0.01
CTNS-209ENST00000574776 LUC7L2Q9Y383 392 aaKnown RBP15.12■□□□□ 0.01
CTNS-209ENST00000574776 PRKAB1Q9Y478 270 aa15.12■□□□□ 0.01
CTNS-209ENST00000574776 SDK2Q58EX2 2172 aa15.11■□□□□ 0.01
CTNS-209ENST00000574776 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.11■□□□□ 0.01
CTNS-209ENST00000574776 EML2O95834 649 aa15.11■□□□□ 0.01
CTNS-209ENST00000574776 ATP1A1P05023 1023 aaKnown RBP15.11■□□□□ 0.01
CTNS-209ENST00000574776 ITGB2P05107 769 aa15.11■□□□□ 0.01
CTNS-209ENST00000574776 PYGLP06737 847 aa15.11■□□□□ 0.01
CTNS-209ENST00000574776 CSF2RBP32927 897 aa15.11■□□□□ 0.01
CTNS-209ENST00000574776 CSTF2P33240 577 aaKnown RBP eCLIP15.11■□□□□ 0.01
CTNS-209ENST00000574776 PPM1FP49593 454 aaPredicted RBP15.11■□□□□ 0.01
CTNS-209ENST00000574776 ARSDP51689 593 aa15.11■□□□□ 0.01
CTNS-209ENST00000574776 TAS2R40P59535 323 aa15.11■□□□□ 0.01
CTNS-209ENST00000574776 TPM4P67936 248 aa15.11■□□□□ 0.01
CTNS-209ENST00000574776 SLC10A2Q12908 348 aaPredicted RBP15.11■□□□□ 0.01
CTNS-209ENST00000574776 TRA2AQ13595 282 aaKnown RBP eCLIP15.11■□□□□ 0.01
CTNS-209ENST00000574776 PDK2Q15119 407 aa15.11■□□□□ 0.01
CTNS-209ENST00000574776 TBR1Q16650 682 aa15.11■□□□□ 0.01
CTNS-209ENST00000574776 TMEM71Q6P5X7 295 aa15.11■□□□□ 0.01
CTNS-209ENST00000574776 XKR5Q6UX68 686 aa15.11■□□□□ 0.01
CTNS-209ENST00000574776 CHST15Q7LFX5 561 aaPredicted RBP15.11■□□□□ 0.01
CTNS-209ENST00000574776 PQLC3Q8N755 202 aa15.11■□□□□ 0.01
CTNS-209ENST00000574776 CCNYQ8ND76 341 aa15.11■□□□□ 0.01
CTNS-209ENST00000574776 AGBL5Q8NDL9 886 aa15.11■□□□□ 0.01
CTNS-209ENST00000574776 LPCAT1Q8NF37 534 aa15.11■□□□□ 0.01
CTNS-209ENST00000574776 ZNF564Q8TBZ8 553 aaPredicted RBP15.11■□□□□ 0.01
CTNS-209ENST00000574776 ART4Q93070 314 aa15.11■□□□□ 0.01
CTNS-209ENST00000574776 SLC38A3Q99624 504 aa15.11■□□□□ 0.01
CTNS-209ENST00000574776 PCDH9Q9HC56 1237 aa15.11■□□□□ 0.01
CTNS-209ENST00000574776 OCIAD1Q9NX40 245 aa15.11■□□□□ 0.01
CTNS-209ENST00000574776 CTTNBP2NLQ9P2B4 639 aa15.11■□□□□ 0.01
CTNS-209ENST00000574776 CNOT6Q9ULM6 557 aaKnown RBP15.11■□□□□ 0.01
CTNS-209ENST00000574776 PCYT1BQ9Y5K3 369 aaPredicted RBP15.11■□□□□ 0.01
CTNS-209ENST00000574776 ZFC3H1O60293 1989 aaKnown RBP15.11■□□□□ 0.01
CTNS-209ENST00000574776 STMND1H3BQB6 276 aa15.1■□□□□ 0.01
CTNS-209ENST00000574776 PROSCO94903 275 aa15.1■□□□□ 0.01
CTNS-209ENST00000574776 HLA-DQB2P05538 268 aa15.1■□□□□ 0.01
CTNS-209ENST00000574776 FAM87AP0C7U9 286 aa15.1■□□□□ 0.01
CTNS-209ENST00000574776 GBE1Q04446 702 aa15.1■□□□□ 0.01
CTNS-209ENST00000574776 LRP8Q14114 963 aa15.1■□□□□ 0.01
CTNS-209ENST00000574776 FAM182AQ5T1J6 154 aa15.1■□□□□ 0.01
CTNS-209ENST00000574776 PRICKLE2Q7Z3G6 844 aa15.1■□□□□ 0.01
CTNS-209ENST00000574776 MAP7D3Q8IWC1 876 aa15.1■□□□□ 0.01
CTNS-209ENST00000574776 SFRP1Q8N474 314 aa15.1■□□□□ 0.01
CTNS-209ENST00000574776 SLC37A2Q8TED4 501 aa15.1■□□□□ 0.01
CTNS-209ENST00000574776 FATE1Q969F0 183 aa15.1■□□□□ 0.01
CTNS-209ENST00000574776 NKD1Q969G9 470 aa15.1■□□□□ 0.01
CTNS-209ENST00000574776 AHCYL2Q96HN2 611 aaKnown RBP15.1■□□□□ 0.01
CTNS-209ENST00000574776 WDR24Q96S15 920 aa15.1■□□□□ 0.01
CTNS-209ENST00000574776 DPYSL5Q9BPU6 564 aa15.1■□□□□ 0.01
CTNS-209ENST00000574776 ZNF670Q9BS34 389 aa15.1■□□□□ 0.01
CTNS-209ENST00000574776 FAM117AQ9C073 453 aa15.1■□□□□ 0.01
CTNS-209ENST00000574776 HAUS2Q9NVX0 235 aa15.1■□□□□ 0.01
CTNS-209ENST00000574776 SLC39A1Q9NY26 324 aa15.1■□□□□ 0.01
CTNS-209ENST00000574776 AMACRQ9UHK6 382 aa15.1■□□□□ 0.01
CTNS-209ENST00000574776 DNPEPQ9ULA0 475 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms