RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 CDK3Q00526 305 aa15.74■□□□□ 0.11
CHD3-215ENST00000572750 TCEA2Q15560 299 aa15.74■□□□□ 0.11
CHD3-215ENST00000572750 ALG11Q2TAA5 492 aa15.74■□□□□ 0.11
CHD3-215ENST00000572750 HENMT1Q5T8I9 393 aaKnown RBP15.74■□□□□ 0.11
CHD3-215ENST00000572750 PAPD7Q5XG87 772 aaKnown RBP15.74■□□□□ 0.11
CHD3-215ENST00000572750 RANBP10Q6VN20 620 aa15.74■□□□□ 0.11
CHD3-215ENST00000572750 KANSL1Q7Z3B3 1105 aa15.74■□□□□ 0.11
CHD3-215ENST00000572750 TMC3Q7Z5M5 1100 aa15.74■□□□□ 0.11
CHD3-215ENST00000572750 PIP4P1Q86T03 277 aa15.74■□□□□ 0.11
CHD3-215ENST00000572750 TRIM74Q86UV6 250 aa15.74■□□□□ 0.11
CHD3-215ENST00000572750 PHACTR4Q8IZ21 702 aa15.74■□□□□ 0.11
CHD3-215ENST00000572750 NRSN1Q8IZ57 195 aa15.74■□□□□ 0.11
CHD3-215ENST00000572750 TTC30BQ8N4P2 665 aa15.74■□□□□ 0.11
CHD3-215ENST00000572750 ZNF548Q8NEK5 533 aaPredicted RBP15.74■□□□□ 0.11
CHD3-215ENST00000572750 SETD7Q8WTS6 366 aaKnown RBP15.74■□□□□ 0.11
CHD3-215ENST00000572750 TSACCQ96A04 125 aaPredicted RBP15.74■□□□□ 0.11
CHD3-215ENST00000572750 WDR92Q96MX6 357 aa15.74■□□□□ 0.11
CHD3-215ENST00000572750 BBC3Q96PG8 261 aaPredicted RBP15.74■□□□□ 0.11
CHD3-215ENST00000572750 ETNK1Q9HBU6 452 aa15.74■□□□□ 0.11
CHD3-215ENST00000572750 FGF22Q9HCT0 170 aa15.74■□□□□ 0.11
CHD3-215ENST00000572750 BPIFA1Q9NP55 256 aa15.74■□□□□ 0.11
CHD3-215ENST00000572750 RAB6BQ9NRW1 208 aa15.74■□□□□ 0.11
CHD3-215ENST00000572750 HOMER3Q9NSC5 361 aa15.74■□□□□ 0.11
CHD3-215ENST00000572750 PIH1D1Q9NWS0 290 aaKnown RBP15.74■□□□□ 0.11
CHD3-215ENST00000572750 UCKL1Q9NWZ5 548 aa15.74■□□□□ 0.11
CHD3-215ENST00000572750 PAK5Q9P286 719 aa15.74■□□□□ 0.11
CHD3-215ENST00000572750 APOBEC3BQ9UH17 382 aaKnown RBP15.74■□□□□ 0.11
CHD3-215ENST00000572750 COL5A1P20908 1838 aaPredicted RBP15.73■□□□□ 0.11
CHD3-215ENST00000572750 FADS2P1A8MWK0 482 aa15.73■□□□□ 0.11
CHD3-215ENST00000572750 INPP4BO15327 924 aa15.73■□□□□ 0.11
CHD3-215ENST00000572750 PHF2O75151 1096 aa15.73■□□□□ 0.11
CHD3-215ENST00000572750 PIAS2O75928 621 aa15.73■□□□□ 0.11
CHD3-215ENST00000572750 CSF2P04141 144 aa15.73■□□□□ 0.11
CHD3-215ENST00000572750 BPIP17213 487 aa15.73■□□□□ 0.11
CHD3-215ENST00000572750 JUNDP17535 347 aa15.73■□□□□ 0.11
CHD3-215ENST00000572750 RPL22P35268 128 aaKnown RBP15.73■□□□□ 0.11
CHD3-215ENST00000572750 TRIM23P36406 574 aa15.73■□□□□ 0.11
CHD3-215ENST00000572750 TRIP13Q15645 432 aaPredicted RBP15.73■□□□□ 0.11
CHD3-215ENST00000572750 CYP1B1Q16678 543 aa15.73■□□□□ 0.11
CHD3-215ENST00000572750 DENND5AQ6IQ26 1287 aa15.73■□□□□ 0.11
CHD3-215ENST00000572750 DOK6Q6PKX4 331 aa15.73■□□□□ 0.11
CHD3-215ENST00000572750 ENPP7Q6UWV6 458 aa15.73■□□□□ 0.11
CHD3-215ENST00000572750 ADAMTSL4Q6UY14 1074 aa15.73■□□□□ 0.11
CHD3-215ENST00000572750 GPR26Q8NDV2 337 aa15.73■□□□□ 0.11
CHD3-215ENST00000572750 MAGOHBQ96A72 148 aaKnown RBP15.73■□□□□ 0.11
CHD3-215ENST00000572750 LRRC45Q96CN5 670 aa15.73■□□□□ 0.11
CHD3-215ENST00000572750 SRPK1Q96SB4 655 aaKnown RBP15.73■□□□□ 0.11
CHD3-215ENST00000572750 LRRC61Q9BV99 259 aa15.73■□□□□ 0.11
CHD3-215ENST00000572750 TEX101Q9BY14 249 aa15.73■□□□□ 0.11
CHD3-215ENST00000572750 FAM83DQ9H4H8 585 aa15.73■□□□□ 0.11
CHD3-215ENST00000572750 TRABDQ9H4I3 376 aa15.73■□□□□ 0.11
CHD3-215ENST00000572750 MRPL40Q9NQ50 206 aaKnown RBP15.73■□□□□ 0.11
CHD3-215ENST00000572750 PHPT1Q9NRX4 125 aaPredicted RBP15.73■□□□□ 0.11
CHD3-215ENST00000572750 HACD3Q9P035 362 aa15.73■□□□□ 0.11
CHD3-215ENST00000572750 KLQ9UEF7 1012 aa15.73■□□□□ 0.11
CHD3-215ENST00000572750 PCOLCE2Q9UKZ9 415 aa15.73■□□□□ 0.11
CHD3-215ENST00000572750 DRG1Q9Y295 367 aaKnown RBP15.73■□□□□ 0.11
CHD3-215ENST00000572750 ARL5AQ9Y689 179 aa15.73■□□□□ 0.11
CHD3-215ENST00000572750 GOLGA6L10A0A0M3HER8 536 aa15.72■□□□□ 0.11
CHD3-215ENST00000572750 E7EVH7 732 aa15.72■□□□□ 0.11
CHD3-215ENST00000572750 H3BM21 787 aa15.72■□□□□ 0.11
CHD3-215ENST00000572750 FFAR2O15552 330 aa15.72■□□□□ 0.11
CHD3-215ENST00000572750 CAPNS1P04632 268 aa15.72■□□□□ 0.11
CHD3-215ENST00000572750 DGKAP23743 735 aa15.72■□□□□ 0.11
CHD3-215ENST00000572750 FDFT1P37268 417 aa15.72■□□□□ 0.11
CHD3-215ENST00000572750 GRK6P43250 576 aa15.72■□□□□ 0.11
CHD3-215ENST00000572750 LMAN1P49257 510 aa15.72■□□□□ 0.11
CHD3-215ENST00000572750 VPS41P49754 854 aa15.72■□□□□ 0.11
CHD3-215ENST00000572750 DCDC1P59894 354 aa15.72■□□□□ 0.11
CHD3-215ENST00000572750 HNRNPKP61978 463 aaKnown RBP eCLIP15.72■□□□□ 0.11
CHD3-215ENST00000572750 PPARDQ03181 441 aa15.72■□□□□ 0.11
CHD3-215ENST00000572750 SEMA5AQ13591 1074 aa15.72■□□□□ 0.11
CHD3-215ENST00000572750 PTPRCAPQ14761 206 aa15.72■□□□□ 0.11
CHD3-215ENST00000572750 SUZ12Q15022 739 aaKnown RBP15.72■□□□□ 0.11
CHD3-215ENST00000572750 INAVAQ3KP66 663 aa15.72■□□□□ 0.11
CHD3-215ENST00000572750 RD3Q7Z3Z2 195 aa15.72■□□□□ 0.11
CHD3-215ENST00000572750 HID1Q8IV36 788 aa15.72■□□□□ 0.11
CHD3-215ENST00000572750 RAVER1Q8IY67 606 aaKnown RBP15.72■□□□□ 0.11
CHD3-215ENST00000572750 OR56A4Q8NGH8 313 aa15.72■□□□□ 0.11
CHD3-215ENST00000572750 OR1E3Q8WZA6 343 aa15.72■□□□□ 0.11
CHD3-215ENST00000572750 SPATA16Q9BXB7 569 aa15.72■□□□□ 0.11
CHD3-215ENST00000572750 SUDS3Q9H7L9 328 aaPredicted RBP15.72■□□□□ 0.11
CHD3-215ENST00000572750 SAR1BQ9Y6B6 198 aa15.72■□□□□ 0.11
CHD3-215ENST00000572750 PLXNB3Q9ULL4 1909 aa15.71■□□□□ 0.11
CHD3-215ENST00000572750 RGSL1A5PLK6 1076 aa15.71■□□□□ 0.11
CHD3-215ENST00000572750 GPR39O43194 453 aa15.71■□□□□ 0.11
CHD3-215ENST00000572750 CBFA2T3O75081 653 aa15.71■□□□□ 0.11
CHD3-215ENST00000572750 APRTP07741 180 aa15.71■□□□□ 0.11
CHD3-215ENST00000572750 CELA2BP08218 269 aaPredicted RBP15.71■□□□□ 0.11
CHD3-215ENST00000572750 HOXC4P09017 264 aaPredicted RBP15.71■□□□□ 0.11
CHD3-215ENST00000572750 CSRP1P21291 193 aaKnown RBP15.71■□□□□ 0.11
CHD3-215ENST00000572750 KELP23276 732 aa15.71■□□□□ 0.11
CHD3-215ENST00000572750 TEAD1P28347 426 aa15.71■□□□□ 0.11
CHD3-215ENST00000572750 HMGCLP35914 325 aa15.71■□□□□ 0.11
CHD3-215ENST00000572750 COILP38432 576 aaPredicted RBP15.71■□□□□ 0.11
CHD3-215ENST00000572750 TERF1P54274 439 aa15.71■□□□□ 0.11
CHD3-215ENST00000572750 SRP54P61011 504 aaKnown RBP15.71■□□□□ 0.11
CHD3-215ENST00000572750 BASP1P80723 227 aaKnown RBP15.71■□□□□ 0.11
CHD3-215ENST00000572750 PRRT3Q5FWE3 981 aa15.71■□□□□ 0.11
CHD3-215ENST00000572750 CCDC137Q6PK04 289 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms