RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 RAD18Q9NS91 495 aa13.75□□□□□ -0.21
HERPUD1-218ENST00000569569 CEP295Q9C0D2 2601 aa13.74□□□□□ -0.21
HERPUD1-218ENST00000569569 LY6G6EA0A0G2JKS1 128 aa13.74□□□□□ -0.21
HERPUD1-218ENST00000569569 TCRBV7S2A1N4TA0A589 114 aa13.74□□□□□ -0.21
HERPUD1-218ENST00000569569 FGF1P05230 155 aa13.74□□□□□ -0.21
HERPUD1-218ENST00000569569 CELA2BP08218 269 aaPredicted RBP13.74□□□□□ -0.21
HERPUD1-218ENST00000569569 PSMB4P28070 264 aa13.74□□□□□ -0.21
HERPUD1-218ENST00000569569 RPIAP49247 311 aa13.74□□□□□ -0.21
HERPUD1-218ENST00000569569 TMPRSS12Q86WS5 348 aa13.74□□□□□ -0.21
HERPUD1-218ENST00000569569 SLC13A5Q86YT5 568 aaPredicted RBP13.74□□□□□ -0.21
HERPUD1-218ENST00000569569 SLC25A41Q8N5S1 370 aa13.74□□□□□ -0.21
HERPUD1-218ENST00000569569 GPR26Q8NDV2 337 aa13.74□□□□□ -0.21
HERPUD1-218ENST00000569569 CCDC110Q8TBZ0 833 aa13.74□□□□□ -0.21
HERPUD1-218ENST00000569569 COX14Q96I36 57 aa13.74□□□□□ -0.21
HERPUD1-218ENST00000569569 FRMD8P1Q9BZ68 369 aaPredicted RBP13.74□□□□□ -0.21
HERPUD1-218ENST00000569569 TMEM168Q9H0V1 697 aa13.74□□□□□ -0.21
HERPUD1-218ENST00000569569 CARS2Q9HA77 564 aaKnown RBP13.74□□□□□ -0.21
HERPUD1-218ENST00000569569 HACD3Q9P035 362 aa13.74□□□□□ -0.21
HERPUD1-218ENST00000569569 SLC17A4Q9Y2C5 497 aa13.74□□□□□ -0.21
HERPUD1-218ENST00000569569 R3HDM2Q9Y2K5 976 aaKnown RBP13.74□□□□□ -0.21
HERPUD1-218ENST00000569569 SPO11Q9Y5K1 396 aa13.74□□□□□ -0.21
HERPUD1-218ENST00000569569 U3KQA8 63 aa13.74□□□□□ -0.21
HERPUD1-218ENST00000569569 EME2A4GXA9 379 aaPredicted RBP13.73□□□□□ -0.21
HERPUD1-218ENST00000569569 INPP4BO15327 924 aa13.73□□□□□ -0.21
HERPUD1-218ENST00000569569 AGTP01019 485 aa13.73□□□□□ -0.21
HERPUD1-218ENST00000569569 FUCA1P04066 466 aa13.73□□□□□ -0.21
HERPUD1-218ENST00000569569 GP1BAP07359 652 aa13.73□□□□□ -0.21
HERPUD1-218ENST00000569569 IVLP07476 585 aa13.73□□□□□ -0.21
HERPUD1-218ENST00000569569 MYF5P13349 255 aa13.73□□□□□ -0.21
HERPUD1-218ENST00000569569 STIP1P31948 543 aaKnown RBP13.73□□□□□ -0.21
HERPUD1-218ENST00000569569 HMGCLP35914 325 aa13.73□□□□□ -0.21
HERPUD1-218ENST00000569569 CHRNA4P43681 627 aa13.73□□□□□ -0.21
HERPUD1-218ENST00000569569 DCDC1P59894 354 aa13.73□□□□□ -0.21
HERPUD1-218ENST00000569569 NR0B2Q15466 257 aa13.73□□□□□ -0.21
HERPUD1-218ENST00000569569 TCEA2Q15560 299 aa13.73□□□□□ -0.21
HERPUD1-218ENST00000569569 RANBP10Q6VN20 620 aa13.73□□□□□ -0.21
HERPUD1-218ENST00000569569 CCNI2Q6ZMN8 369 aaPredicted RBP13.73□□□□□ -0.21
HERPUD1-218ENST00000569569 TAF8Q7Z7C8 310 aa13.73□□□□□ -0.21
HERPUD1-218ENST00000569569 FAM71DQ8N9W8 422 aa13.73□□□□□ -0.21
HERPUD1-218ENST00000569569 SCARF2Q96GP6 870 aaPredicted RBP13.73□□□□□ -0.21
HERPUD1-218ENST00000569569 CNTNAP3BQ96NU0 1288 aa13.73□□□□□ -0.21
HERPUD1-218ENST00000569569 GORASP1Q9BQQ3 440 aa13.73□□□□□ -0.21
HERPUD1-218ENST00000569569 TMEM121Q9BTD3 319 aa13.73□□□□□ -0.21
HERPUD1-218ENST00000569569 ZSCAN5AQ9BUG6 496 aa13.73□□□□□ -0.21
HERPUD1-218ENST00000569569 SPATA16Q9BXB7 569 aa13.73□□□□□ -0.21
HERPUD1-218ENST00000569569 CNTNAP3Q9BZ76 1288 aa13.73□□□□□ -0.21
HERPUD1-218ENST00000569569 TRNAU1APQ9NX07 287 aaKnown RBP13.73□□□□□ -0.21
HERPUD1-218ENST00000569569 NFKBIL1Q9UBC1 381 aaPredicted RBP13.73□□□□□ -0.21
HERPUD1-218ENST00000569569 CNOT6Q9ULM6 557 aaKnown RBP13.73□□□□□ -0.21
HERPUD1-218ENST00000569569 SUFUQ9UMX1 484 aa13.73□□□□□ -0.21
HERPUD1-218ENST00000569569 TMEM98Q9Y2Y6 226 aa13.73□□□□□ -0.21
HERPUD1-218ENST00000569569 ZNF106Q9H2Y7 1883 aaKnown RBP13.72□□□□□ -0.21
HERPUD1-218ENST00000569569 AKAP13Q12802 2813 aa13.72□□□□□ -0.21
HERPUD1-218ENST00000569569 CPED1A4D0V7 1026 aa13.72□□□□□ -0.21
HERPUD1-218ENST00000569569 FADS2P1A8MWK0 482 aa13.72□□□□□ -0.21
HERPUD1-218ENST00000569569 AURKAO14965 403 aa13.72□□□□□ -0.21
HERPUD1-218ENST00000569569 ASMTLO95671 621 aa13.72□□□□□ -0.21
HERPUD1-218ENST00000569569 SLC4A1P02730 911 aa13.72□□□□□ -0.21
HERPUD1-218ENST00000569569 JUPP14923 745 aa13.72□□□□□ -0.21
HERPUD1-218ENST00000569569 BPIP17213 487 aa13.72□□□□□ -0.21
HERPUD1-218ENST00000569569 ADRA1AP35348 466 aa13.72□□□□□ -0.21
HERPUD1-218ENST00000569569 GNPDA1P46926 289 aa13.72□□□□□ -0.21
HERPUD1-218ENST00000569569 POLD2P49005 469 aa13.72□□□□□ -0.21
HERPUD1-218ENST00000569569 PARP6Q2NL67 630 aa13.72□□□□□ -0.21
HERPUD1-218ENST00000569569 PDPK2PQ6A1A2 396 aa13.72□□□□□ -0.21
HERPUD1-218ENST00000569569 DOK6Q6PKX4 331 aa13.72□□□□□ -0.21
HERPUD1-218ENST00000569569 ARHGEF18Q6ZSZ5 1173 aa13.72□□□□□ -0.21
HERPUD1-218ENST00000569569 SLC35F3Q8IY50 421 aa13.72□□□□□ -0.21
HERPUD1-218ENST00000569569 TRAM1L1Q8N609 369 aa13.72□□□□□ -0.21
HERPUD1-218ENST00000569569 ARL10Q8N8L6 244 aa13.72□□□□□ -0.21
HERPUD1-218ENST00000569569 IFI44Q8TCB0 444 aa13.72□□□□□ -0.21
HERPUD1-218ENST00000569569 BLOC1S5Q8TDH9 187 aa13.72□□□□□ -0.21
HERPUD1-218ENST00000569569 GPBAR1Q8TDU6 330 aa13.72□□□□□ -0.21
HERPUD1-218ENST00000569569 LRRC45Q96CN5 670 aa13.72□□□□□ -0.21
HERPUD1-218ENST00000569569 PLEKHG4BQ96PX9 1271 aa13.72□□□□□ -0.21
HERPUD1-218ENST00000569569 FICDQ9BVA6 458 aa13.72□□□□□ -0.21
HERPUD1-218ENST00000569569 TLR10Q9BXR5 811 aa13.72□□□□□ -0.21
HERPUD1-218ENST00000569569 GSDMCQ9BYG8 508 aa13.72□□□□□ -0.21
HERPUD1-218ENST00000569569 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.72□□□□□ -0.21
HERPUD1-218ENST00000569569 VPS18Q9P253 973 aa13.72□□□□□ -0.21
HERPUD1-218ENST00000569569 GULP1Q9UBP9 304 aa13.72□□□□□ -0.21
HERPUD1-218ENST00000569569 GPR34Q9UPC5 381 aa13.72□□□□□ -0.21
HERPUD1-218ENST00000569569 MAP1BP46821 2468 aaKnown RBP13.72□□□□□ -0.21
HERPUD1-218ENST00000569569 ZSCAN12O43309 604 aa13.71□□□□□ -0.21
HERPUD1-218ENST00000569569 LIASO43766 372 aa13.71□□□□□ -0.21
HERPUD1-218ENST00000569569 GDF10P55107 478 aa13.71□□□□□ -0.21
HERPUD1-218ENST00000569569 INSM1Q01101 510 aaPredicted RBP13.71□□□□□ -0.21
HERPUD1-218ENST00000569569 ILF3Q12906 894 aaKnown RBP eCLIP13.71□□□□□ -0.21
HERPUD1-218ENST00000569569 PEX6Q13608 980 aa13.71□□□□□ -0.21
HERPUD1-218ENST00000569569 OASLQ15646 514 aaKnown RBP13.71□□□□□ -0.21
HERPUD1-218ENST00000569569 P3H1Q32P28 736 aa13.71□□□□□ -0.21
HERPUD1-218ENST00000569569 PYCR3Q53H96 274 aa13.71□□□□□ -0.21
HERPUD1-218ENST00000569569 ZDHHC20Q5W0Z9 365 aa13.71□□□□□ -0.21
HERPUD1-218ENST00000569569 ALS2CLQ60I27 953 aa13.71□□□□□ -0.21
HERPUD1-218ENST00000569569 GUSBP11Q6P575 273 aa13.71□□□□□ -0.21
HERPUD1-218ENST00000569569 OGFOD3Q6PK18 319 aa13.71□□□□□ -0.21
HERPUD1-218ENST00000569569 EFL1Q7Z2Z2 1120 aaKnown RBP13.71□□□□□ -0.21
HERPUD1-218ENST00000569569 GLT6D1Q7Z4J2 308 aa13.71□□□□□ -0.21
HERPUD1-218ENST00000569569 TRIM74Q86UV6 250 aa13.71□□□□□ -0.21
HERPUD1-218ENST00000569569 KLHDC8BQ8IXV7 354 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms