RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 DEFB113Q30KQ7 82 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 MYLK3Q32MK0 819 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 RILPL1Q5EBL4 403 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 FAM69BQ5VUD6 431 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 SHEQ5VZ18 495 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 PMF1Q6P1K2 205 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 C16orf47Q6ZP98 133 aaPredicted RBP6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 SV2BQ7L1I2 683 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 EPM2AIP1Q7L775 607 aaPredicted RBP6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 MRGPREQ86SM8 312 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 GUF1Q8N442 669 aaKnown RBP6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 RYBPQ8N488 228 aaPredicted RBP6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 DNAAF3Q8N9W5 541 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 OR2AP1Q8NGE2 309 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 UBA3Q8TBC4 463 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 CA5BP1Q8WTZ4 195 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 PHF10Q8WUB8 498 aaKnown RBP6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 SLC35F5Q8WV83 523 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 RMND5BQ96G75 393 aaPredicted RBP6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 TAAR6Q96RI8 345 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 POLDIP3Q9BY77 421 aaKnown RBP6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 BACH2Q9BYV9 841 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 FRMD8Q9BZ67 464 aaPredicted RBP6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 NPDC1Q9NQX5 325 aaPredicted RBP6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 CGNQ9P2M7 1197 aaKnown RBP6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 SEC14L3Q9UDX4 400 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 SERTAD1Q9UHV2 236 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 A0A0G2JK05 382 aa6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 ILVBLA1L0T0 632 aa6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 EXOC3O60645 756 aa6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 RECQL5O94762 991 aaPredicted RBP6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 SLCO2B1O94956 709 aa6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 HOXD4P09016 255 aaPredicted RBP6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 CCR1P32246 355 aa6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 HADHAP40939 763 aa6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 DLG4P78352 724 aa6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 ACY1Q03154 408 aa6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 DMPKQ09013 629 aa6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 TUBB3Q13509 450 aa6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 ALFQ53S48 1182 aa6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 SYPL2Q5VXT5 272 aa6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 LCN10Q6JVE6 187 aa6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 PNCKQ6P2M8 343 aa6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 ZNF783Q6ZMS7 281 aa6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 Q6ZPB1 254 aaPredicted RBP6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 OR7D4Q8NG98 312 aa6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 HCAR2Q8TDS4 363 aa6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 EPS8L1Q8TE68 723 aa6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 SCARF2Q96GP6 870 aaPredicted RBP6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 CNDP1Q96KN2 507 aa6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 HSFY1Q96LI6 401 aa6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 NT5C1BQ96P26 610 aa6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 TGM7Q96PF1 710 aa6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 GBP5Q96PP8 586 aa6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 SECISBP2Q96T21 854 aaKnown RBP6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 MENTQ9BUN1 341 aa6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 TRIM62Q9BVG3 475 aa6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 TBC1D10AQ9BXI6 508 aa6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 TEX101Q9BY14 249 aa6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 SUDS3Q9H7L9 328 aaPredicted RBP6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 ATP13A2Q9NQ11 1180 aa6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 ANLNQ9NQW6 1124 aa6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 PHPT1Q9NRX4 125 aaPredicted RBP6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 CISHQ9NSE2 258 aa6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 OGFRQ9NZT2 677 aa6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 SEMA5BQ9P283 1151 aa6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 ABI3Q9P2A4 366 aa6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 TINAGQ9UJW2 476 aa6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 SLC17A4Q9Y2C5 497 aa6.53□□□□□ -1.36
HERPUD1-217ENST00000569429 CPAMD8Q8IZJ3 1885 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 RYR3Q15413 4870 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 TRIM49BA6NDI0 452 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 MEN1O00255 615 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 PIK3R2O00459 728 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 PEX12O00623 359 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 TEX33O43247 280 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 SART1O43290 800 aaKnown RBP6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 RASSF9O75901 435 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 EML2O95834 649 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 FOLR1P15328 257 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 UGT1A4P22310 534 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 XPAP23025 273 aaPredicted RBP6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 MST1P26927 711 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 MSX1P28360 303 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 MMP12P39900 470 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 RGS7P49802 495 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 RAD51Q06609 339 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 TFF3Q07654 80 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 MYBPHQ13203 477 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 SSPNQ14714 243 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 POLD3Q15054 466 aaPredicted RBP6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 UGP2Q16851 508 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 PLEKHS1Q5SXH7 462 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 TMCO4Q5TGY1 634 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 CACHD1Q5VU97 1274 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 AGAP7PQ5VUJ5 663 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 IYDQ6PHW0 289 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 FAM198BQ6UWH4 519 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 PAMR1Q6UXH9 720 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 SLC9B2Q86UD5 537 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms