RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 RGSL1A5PLK6 1076 aa12.74□□□□□ -0.37
CDT1-203ENST00000569140 C2orf81A6NN90 581 aa12.74□□□□□ -0.37
CDT1-203ENST00000569140 FADS2P1A8MWK0 482 aa12.74□□□□□ -0.37
CDT1-203ENST00000569140 CRTAMO95727 393 aa12.74□□□□□ -0.37
CDT1-203ENST00000569140 AP2A1O95782 977 aa12.74□□□□□ -0.37
CDT1-203ENST00000569140 SOD1P00441 154 aa12.74□□□□□ -0.37
CDT1-203ENST00000569140 APRTP07741 180 aa12.74□□□□□ -0.37
CDT1-203ENST00000569140 ANXA6P08133 673 aa12.74□□□□□ -0.37
CDT1-203ENST00000569140 BPIP17213 487 aa12.74□□□□□ -0.37
CDT1-203ENST00000569140 TPH1P17752 444 aa12.74□□□□□ -0.37
CDT1-203ENST00000569140 RPL22P35268 128 aaKnown RBP12.74□□□□□ -0.37
CDT1-203ENST00000569140 TRIM23P36406 574 aa12.74□□□□□ -0.37
CDT1-203ENST00000569140 SPAM1P38567 509 aa12.74□□□□□ -0.37
CDT1-203ENST00000569140 POLD2P49005 469 aa12.74□□□□□ -0.37
CDT1-203ENST00000569140 HK3P52790 923 aa12.74□□□□□ -0.37
CDT1-203ENST00000569140 TMPRSS15P98073 1019 aa12.74□□□□□ -0.37
CDT1-203ENST00000569140 DAB2P98082 770 aa12.74□□□□□ -0.37
CDT1-203ENST00000569140 POU6F1Q14863 301 aa12.74□□□□□ -0.37
CDT1-203ENST00000569140 HENMT1Q5T8I9 393 aaKnown RBP12.74□□□□□ -0.37
CDT1-203ENST00000569140 FAM151BQ6UXP7 276 aa12.74□□□□□ -0.37
CDT1-203ENST00000569140 ADAMTSL4Q6UY14 1074 aa12.74□□□□□ -0.37
CDT1-203ENST00000569140 RANBP10Q6VN20 620 aa12.74□□□□□ -0.37
CDT1-203ENST00000569140 ACTRT1Q8TDG2 376 aa12.74□□□□□ -0.37
CDT1-203ENST00000569140 EID2BQ96D98 161 aa12.74□□□□□ -0.37
CDT1-203ENST00000569140 LRRC61Q9BV99 259 aa12.74□□□□□ -0.37
CDT1-203ENST00000569140 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.74□□□□□ -0.37
CDT1-203ENST00000569140 SIRPGQ9P1W8 387 aa12.74□□□□□ -0.37
CDT1-203ENST00000569140 PNMA8BQ9ULN7 279 aaPredicted RBP12.74□□□□□ -0.37
CDT1-203ENST00000569140 TTC7AQ9ULT0 858 aaPredicted RBP12.74□□□□□ -0.37
CDT1-203ENST00000569140 GPSM3Q9Y4H4 160 aa12.74□□□□□ -0.37
CDT1-203ENST00000569140 SAR1BQ9Y6B6 198 aa12.74□□□□□ -0.37
CDT1-203ENST00000569140 CACNA1EQ15878 2313 aa12.73□□□□□ -0.37
CDT1-203ENST00000569140 GLYATL1P3A0A0U1RQE8 302 aa12.73□□□□□ -0.37
CDT1-203ENST00000569140 CCDC78A2IDD5 438 aa12.73□□□□□ -0.37
CDT1-203ENST00000569140 CES2O00748 559 aa12.73□□□□□ -0.37
CDT1-203ENST00000569140 SIGLEC6O43699 453 aa12.73□□□□□ -0.37
CDT1-203ENST00000569140 PHF2O75151 1096 aa12.73□□□□□ -0.37
CDT1-203ENST00000569140 SLC25A14O95258 325 aaPredicted RBP12.73□□□□□ -0.37
CDT1-203ENST00000569140 CELA2BP08218 269 aaPredicted RBP12.73□□□□□ -0.37
CDT1-203ENST00000569140 HOXC4P09017 264 aaPredicted RBP12.73□□□□□ -0.37
CDT1-203ENST00000569140 LPOP22079 712 aaPredicted RBP12.73□□□□□ -0.37
CDT1-203ENST00000569140 TEAD1P28347 426 aa12.73□□□□□ -0.37
CDT1-203ENST00000569140 CASQ1P31415 396 aa12.73□□□□□ -0.37
CDT1-203ENST00000569140 HMGCLP35914 325 aa12.73□□□□□ -0.37
CDT1-203ENST00000569140 COILP38432 576 aaPredicted RBP12.73□□□□□ -0.37
CDT1-203ENST00000569140 DCDC1P59894 354 aa12.73□□□□□ -0.37
CDT1-203ENST00000569140 PTPRCAPQ14761 206 aa12.73□□□□□ -0.37
CDT1-203ENST00000569140 ELOCQ15369 112 aa12.73□□□□□ -0.37
CDT1-203ENST00000569140 TAF1AQ15573 450 aaPredicted RBP12.73□□□□□ -0.37
CDT1-203ENST00000569140 ZDHHC20Q5W0Z9 365 aa12.73□□□□□ -0.37
CDT1-203ENST00000569140 KCTD16Q68DU8 428 aa12.73□□□□□ -0.37
CDT1-203ENST00000569140 KCTD11Q693B1 232 aa12.73□□□□□ -0.37
CDT1-203ENST00000569140 TTC27Q6P3X3 843 aa12.73□□□□□ -0.37
CDT1-203ENST00000569140 CCDC137Q6PK04 289 aaKnown RBP12.73□□□□□ -0.37
CDT1-203ENST00000569140 TAF8Q7Z7C8 310 aa12.73□□□□□ -0.37
CDT1-203ENST00000569140 LINC00523Q86TU6 105 aa12.73□□□□□ -0.37
CDT1-203ENST00000569140 RAVER1Q8IY67 606 aaKnown RBP12.73□□□□□ -0.37
CDT1-203ENST00000569140 SLC25A45Q8N413 288 aa12.73□□□□□ -0.37
CDT1-203ENST00000569140 FSTL5Q8N475 847 aaPredicted RBP12.73□□□□□ -0.37
CDT1-203ENST00000569140 TTC30BQ8N4P2 665 aa12.73□□□□□ -0.37
CDT1-203ENST00000569140 TRAM1L1Q8N609 369 aa12.73□□□□□ -0.37
CDT1-203ENST00000569140 OR4K2Q8NGD2 314 aa12.73□□□□□ -0.37
CDT1-203ENST00000569140 OR52K1Q8NGK4 314 aa12.73□□□□□ -0.37
CDT1-203ENST00000569140 ZSCAN5AQ9BUG6 496 aa12.73□□□□□ -0.37
CDT1-203ENST00000569140 CDH19Q9H159 772 aa12.73□□□□□ -0.37
CDT1-203ENST00000569140 NLGN3Q9NZ94 848 aa12.73□□□□□ -0.37
CDT1-203ENST00000569140 FEZ2Q9UHY8 353 aaPredicted RBP12.73□□□□□ -0.37
CDT1-203ENST00000569140 SUFUQ9UMX1 484 aa12.73□□□□□ -0.37
CDT1-203ENST00000569140 TDRD6O60522 2096 aaKnown RBP12.73□□□□□ -0.37
CDT1-203ENST00000569140 ERI2A8K979 691 aaKnown RBP12.72□□□□□ -0.37
CDT1-203ENST00000569140 TRIM38O00635 465 aa12.72□□□□□ -0.37
CDT1-203ENST00000569140 TNFRSF10CO14798 259 aa12.72□□□□□ -0.37
CDT1-203ENST00000569140 TNFSF14O43557 240 aa12.72□□□□□ -0.37
CDT1-203ENST00000569140 CBFA2T3O75081 653 aa12.72□□□□□ -0.37
CDT1-203ENST00000569140 KRT14P02533 472 aa12.72□□□□□ -0.37
CDT1-203ENST00000569140 CEACAM5P06731 702 aa12.72□□□□□ -0.37
CDT1-203ENST00000569140 PAFAH1B1P43034 410 aa12.72□□□□□ -0.37
CDT1-203ENST00000569140 FOXC1Q12948 553 aa12.72□□□□□ -0.37
CDT1-203ENST00000569140 GPS1Q13098 491 aa12.72□□□□□ -0.37
CDT1-203ENST00000569140 DNAJC3Q13217 504 aa12.72□□□□□ -0.37
CDT1-203ENST00000569140 SEMA5AQ13591 1074 aa12.72□□□□□ -0.37
CDT1-203ENST00000569140 PPP1R7Q15435 360 aa12.72□□□□□ -0.37
CDT1-203ENST00000569140 ZNF648Q5T619 568 aaPredicted RBP12.72□□□□□ -0.37
CDT1-203ENST00000569140 N4BP2L1Q5TBK1 243 aaPredicted RBP12.72□□□□□ -0.37
CDT1-203ENST00000569140 C4orf22Q6V702 233 aa12.72□□□□□ -0.37
CDT1-203ENST00000569140 SYT10Q6XYQ8 523 aa12.72□□□□□ -0.37
CDT1-203ENST00000569140 DBX2Q6ZNG2 339 aa12.72□□□□□ -0.37
CDT1-203ENST00000569140 KANSL1Q7Z3B3 1105 aa12.72□□□□□ -0.37
CDT1-203ENST00000569140 GKN2Q86XP6 184 aa12.72□□□□□ -0.37
CDT1-203ENST00000569140 GALNT13Q8IUC8 556 aa12.72□□□□□ -0.37
CDT1-203ENST00000569140 PHYKPLQ8IUZ5 450 aa12.72□□□□□ -0.37
CDT1-203ENST00000569140 OR4C6Q8NH72 309 aa12.72□□□□□ -0.37
CDT1-203ENST00000569140 BRSK1Q8TDC3 778 aa12.72□□□□□ -0.37
CDT1-203ENST00000569140 GRK7Q8WTQ7 553 aa12.72□□□□□ -0.37
CDT1-203ENST00000569140 SCG3Q8WXD2 468 aaKnown RBP12.72□□□□□ -0.37
CDT1-203ENST00000569140 PLEKHG4BQ96PX9 1271 aa12.72□□□□□ -0.37
CDT1-203ENST00000569140 DUSP23Q9BVJ7 150 aa12.72□□□□□ -0.37
CDT1-203ENST00000569140 FRMD8Q9BZ67 464 aaPredicted RBP12.72□□□□□ -0.37
CDT1-203ENST00000569140 TMEM168Q9H0V1 697 aa12.72□□□□□ -0.37
CDT1-203ENST00000569140 EVA1BQ9NVM1 165 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms