RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 THAP12O43422 761 aa9.66□□□□□ -0.86
CAPN3-216ENST00000567071 MFAP3LO75121 409 aa9.66□□□□□ -0.86
CAPN3-216ENST00000567071 TRUB2O95900 331 aaKnown RBP9.66□□□□□ -0.86
CAPN3-216ENST00000567071 PNMA6AP0CW24 399 aaPredicted RBP9.66□□□□□ -0.86
CAPN3-216ENST00000567071 UCHL3P15374 230 aa9.66□□□□□ -0.86
CAPN3-216ENST00000567071 LPOP22079 712 aaPredicted RBP9.66□□□□□ -0.86
CAPN3-216ENST00000567071 HNRNPH3P31942 346 aaKnown RBP9.66□□□□□ -0.86
CAPN3-216ENST00000567071 CCR1P32246 355 aa9.66□□□□□ -0.86
CAPN3-216ENST00000567071 RPS18P62269 152 aaKnown RBP9.66□□□□□ -0.86
CAPN3-216ENST00000567071 RAD51Q06609 339 aa9.66□□□□□ -0.86
CAPN3-216ENST00000567071 AUHQ13825 339 aaKnown RBP9.66□□□□□ -0.86
CAPN3-216ENST00000567071 TRIM14Q14142 442 aa9.66□□□□□ -0.86
CAPN3-216ENST00000567071 ASIC2Q16515 512 aa9.66□□□□□ -0.86
CAPN3-216ENST00000567071 KCTD16Q68DU8 428 aa9.66□□□□□ -0.86
CAPN3-216ENST00000567071 SLC30A9Q6PML9 568 aa9.66□□□□□ -0.86
CAPN3-216ENST00000567071 XKRXQ6PP77 449 aa9.66□□□□□ -0.86
CAPN3-216ENST00000567071 SETD3Q86TU7 594 aaPredicted RBP9.66□□□□□ -0.86
CAPN3-216ENST00000567071 PLPP6Q8IY26 295 aa9.66□□□□□ -0.86
CAPN3-216ENST00000567071 OR6K2Q8NGY2 324 aa9.66□□□□□ -0.86
CAPN3-216ENST00000567071 CLEC4CQ8WTT0 213 aa9.66□□□□□ -0.86
CAPN3-216ENST00000567071 PATE1Q8WXA2 126 aa9.66□□□□□ -0.86
CAPN3-216ENST00000567071 KAT5Q92993 513 aa9.66□□□□□ -0.86
CAPN3-216ENST00000567071 SPON2Q9BUD6 331 aa9.66□□□□□ -0.86
CAPN3-216ENST00000567071 BRD8Q9H0E9 1235 aa9.66□□□□□ -0.86
CAPN3-216ENST00000567071 UBE2TQ9NPD8 197 aaPredicted RBP9.66□□□□□ -0.86
CAPN3-216ENST00000567071 IMPACTQ9P2X3 320 aa9.66□□□□□ -0.86
CAPN3-216ENST00000567071 DNAJC12Q9UKB3 198 aa9.66□□□□□ -0.86
CAPN3-216ENST00000567071 PCDHGA10Q9Y5H3 936 aa9.66□□□□□ -0.86
CAPN3-216ENST00000567071 CACNA1CQ13936 2221 aa9.66□□□□□ -0.86
CAPN3-216ENST00000567071 FBN1P35555 2871 aaKnown RBP9.65□□□□□ -0.86
CAPN3-216ENST00000567071 LRRC53A6NM62 1247 aa9.65□□□□□ -0.86
CAPN3-216ENST00000567071 KIAA1324LA8MWY0 1029 aaPredicted RBP9.65□□□□□ -0.86
CAPN3-216ENST00000567071 IPO13O94829 963 aaKnown RBP9.65□□□□□ -0.86
CAPN3-216ENST00000567071 POP4O95707 220 aaKnown RBP9.65□□□□□ -0.86
CAPN3-216ENST00000567071 VDRP11473 427 aa9.65□□□□□ -0.86
CAPN3-216ENST00000567071 KRT9P35527 623 aa9.65□□□□□ -0.86
CAPN3-216ENST00000567071 SUOXP51687 545 aa9.65□□□□□ -0.86
CAPN3-216ENST00000567071 YWHAEP62258 255 aaKnown RBP9.65□□□□□ -0.86
CAPN3-216ENST00000567071 SNRPD1P62314 119 aaKnown RBP9.65□□□□□ -0.86
CAPN3-216ENST00000567071 PTK2Q05397 1052 aa9.65□□□□□ -0.86
CAPN3-216ENST00000567071 IL10RAQ13651 578 aa9.65□□□□□ -0.86
CAPN3-216ENST00000567071 RAPSNQ13702 412 aa9.65□□□□□ -0.86
CAPN3-216ENST00000567071 FIGNQ5HY92 759 aa9.65□□□□□ -0.86
CAPN3-216ENST00000567071 CRB2Q5IJ48 1285 aa9.65□□□□□ -0.86
CAPN3-216ENST00000567071 GDPD4Q6W3E5 623 aa9.65□□□□□ -0.86
CAPN3-216ENST00000567071 BEND5Q7L4P6 421 aa9.65□□□□□ -0.86
CAPN3-216ENST00000567071 BIVMQ86UB2 503 aa9.65□□□□□ -0.86
CAPN3-216ENST00000567071 PLXDC1Q8IUK5 500 aa9.65□□□□□ -0.86
CAPN3-216ENST00000567071 NAGSQ8N159 534 aa9.65□□□□□ -0.86
CAPN3-216ENST00000567071 TC2NQ8N9U0 490 aa9.65□□□□□ -0.86
CAPN3-216ENST00000567071 FUBP1Q96AE4 644 aaKnown RBP9.65□□□□□ -0.86
CAPN3-216ENST00000567071 ISG20Q96AZ6 181 aaKnown RBP9.65□□□□□ -0.86
CAPN3-216ENST00000567071 SGSM3Q96HU1 749 aa9.65□□□□□ -0.86
CAPN3-216ENST00000567071 ELMO2Q96JJ3 720 aa9.65□□□□□ -0.86
CAPN3-216ENST00000567071 HSFY1Q96LI6 401 aa9.65□□□□□ -0.86
CAPN3-216ENST00000567071 KREMEN1Q96MU8 473 aa9.65□□□□□ -0.86
CAPN3-216ENST00000567071 OR6C1Q96RD1 312 aa9.65□□□□□ -0.86
CAPN3-216ENST00000567071 WDR26Q9H7D7 661 aa9.65□□□□□ -0.86
CAPN3-216ENST00000567071 FAM204AQ9H8W3 233 aa9.65□□□□□ -0.86
CAPN3-216ENST00000567071 TRNAU1APQ9NX07 287 aaKnown RBP9.65□□□□□ -0.86
CAPN3-216ENST00000567071 SIDT1Q9NXL6 827 aaKnown RBP9.65□□□□□ -0.86
CAPN3-216ENST00000567071 ZNHIT2Q9UHR6 403 aa9.65□□□□□ -0.86
CAPN3-216ENST00000567071 KIAA1257Q9ULG3 409 aa9.65□□□□□ -0.86
CAPN3-216ENST00000567071 CAPN11Q9UMQ6 739 aa9.65□□□□□ -0.86
CAPN3-216ENST00000567071 FARSAQ9Y285 508 aaKnown RBP9.65□□□□□ -0.86
CAPN3-216ENST00000567071 FCF1Q9Y324 198 aaKnown RBP9.65□□□□□ -0.86
CAPN3-216ENST00000567071 LUC7L2Q9Y383 392 aaKnown RBP9.65□□□□□ -0.86
CAPN3-216ENST00000567071 ZNF469Q96JG9 3925 aaPredicted RBP9.65□□□□□ -0.86
CAPN3-216ENST00000567071 SYNJ2BP-COX16A0A087WUM0 186 aa9.64□□□□□ -0.87
CAPN3-216ENST00000567071 A0A1W2PQJ5 194 aa9.64□□□□□ -0.87
CAPN3-216ENST00000567071 AKR1B15C9JRZ8 316 aaPredicted RBP9.64□□□□□ -0.87
CAPN3-216ENST00000567071 E2F3O00716 465 aa9.64□□□□□ -0.87
CAPN3-216ENST00000567071 ZNF821O75541 412 aaPredicted RBP9.64□□□□□ -0.87
CAPN3-216ENST00000567071 SPAG6O75602 509 aa9.64□□□□□ -0.87
CAPN3-216ENST00000567071 FYNP06241 537 aa9.64□□□□□ -0.87
CAPN3-216ENST00000567071 HOXC4P09017 264 aaPredicted RBP9.64□□□□□ -0.87
CAPN3-216ENST00000567071 ANKRD34CP0C6C1 535 aa9.64□□□□□ -0.87
CAPN3-216ENST00000567071 GKP32189 559 aa9.64□□□□□ -0.87
CAPN3-216ENST00000567071 USP8P40818 1118 aa9.64□□□□□ -0.87
CAPN3-216ENST00000567071 MAPK9P45984 424 aa9.64□□□□□ -0.87
CAPN3-216ENST00000567071 IRAK1P51617 712 aa9.64□□□□□ -0.87
CAPN3-216ENST00000567071 EMP3P54852 163 aa9.64□□□□□ -0.87
CAPN3-216ENST00000567071 JAM2P57087 298 aa9.64□□□□□ -0.87
CAPN3-216ENST00000567071 GEMIN4P57678 1058 aaKnown RBP9.64□□□□□ -0.87
CAPN3-216ENST00000567071 GSDMDP57764 484 aa9.64□□□□□ -0.87
CAPN3-216ENST00000567071 ZBED6P86452 979 aa9.64□□□□□ -0.87
CAPN3-216ENST00000567071 CUL2Q13617 745 aa9.64□□□□□ -0.87
CAPN3-216ENST00000567071 TMEM52BQ4KMG9 183 aa9.64□□□□□ -0.87
CAPN3-216ENST00000567071 SYPL2Q5VXT5 272 aa9.64□□□□□ -0.87
CAPN3-216ENST00000567071 E4F1Q66K89 784 aaPredicted RBP9.64□□□□□ -0.87
CAPN3-216ENST00000567071 ERAP2Q6P179 960 aa9.64□□□□□ -0.87
CAPN3-216ENST00000567071 PMF1Q6P1K2 205 aa9.64□□□□□ -0.87
CAPN3-216ENST00000567071 ZNF765Q7L2R6 523 aa9.64□□□□□ -0.87
CAPN3-216ENST00000567071 PPP1R3BQ86XI6 285 aa9.64□□□□□ -0.87
CAPN3-216ENST00000567071 ZNF761Q86XN6 746 aaPredicted RBP9.64□□□□□ -0.87
CAPN3-216ENST00000567071 NRROSQ86YC3 692 aa9.64□□□□□ -0.87
CAPN3-216ENST00000567071 CNGA4Q8IV77 575 aa9.64□□□□□ -0.87
CAPN3-216ENST00000567071 ARFGAP1Q8N6T3 406 aa9.64□□□□□ -0.87
CAPN3-216ENST00000567071 OR2AP1Q8NGE2 309 aa9.64□□□□□ -0.87
CAPN3-216ENST00000567071 GRHL3Q8TE85 626 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms