RNA–Protein interactions for RNA: ENST00000566239.1

HACD3-208, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

TSL 2

Gene HACD3, Length 393 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-208ENST00000566239 TRIM14Q14142 442 aa13.27□□□□□ -0.29
HACD3-208ENST00000566239 PYCR3Q53H96 274 aa13.27□□□□□ -0.29
HACD3-208ENST00000566239 KIAA1614Q5VZ46 1190 aa13.27□□□□□ -0.29
HACD3-208ENST00000566239 RFLNAQ6ZTI6 216 aa13.27□□□□□ -0.29
HACD3-208ENST00000566239 USP53Q70EK8 1073 aa13.27□□□□□ -0.29
HACD3-208ENST00000566239 MARK2Q7KZI7 788 aaKnown RBP13.27□□□□□ -0.29
HACD3-208ENST00000566239 TMPRSS9Q7Z410 1059 aa13.27□□□□□ -0.29
HACD3-208ENST00000566239 GALNT13Q8IUC8 556 aa13.27□□□□□ -0.29
HACD3-208ENST00000566239 CCDC13Q8IYE1 715 aa13.27□□□□□ -0.29
HACD3-208ENST00000566239 LPCAT1Q8NF37 534 aa13.27□□□□□ -0.29
HACD3-208ENST00000566239 ARRDC2Q8TBH0 407 aa13.27□□□□□ -0.29
HACD3-208ENST00000566239 CCHCR1Q8TD31 782 aa13.27□□□□□ -0.29
HACD3-208ENST00000566239 PTCD2Q8WV60 388 aaKnown RBP13.27□□□□□ -0.29
HACD3-208ENST00000566239 USP7Q93009 1102 aa13.27□□□□□ -0.29
HACD3-208ENST00000566239 FAF2Q96CS3 445 aa13.27□□□□□ -0.29
HACD3-208ENST00000566239 DPYSL5Q9BPU6 564 aa13.27□□□□□ -0.29
HACD3-208ENST00000566239 RIOK2Q9BVS4 552 aaKnown RBP13.27□□□□□ -0.29
HACD3-208ENST00000566239 ADGRE3Q9BY15 652 aa13.27□□□□□ -0.29
HACD3-208ENST00000566239 XPO4Q9C0E2 1151 aaKnown RBP13.27□□□□□ -0.29
HACD3-208ENST00000566239 B3GNT4Q9C0J1 378 aa13.27□□□□□ -0.29
HACD3-208ENST00000566239 ZNHIT6Q9NWK9 470 aaKnown RBP13.27□□□□□ -0.29
HACD3-208ENST00000566239 PKD2L2Q9NZM6 624 aa13.27□□□□□ -0.29
HACD3-208ENST00000566239 NENFQ9UMX5 172 aa13.27□□□□□ -0.29
HACD3-208ENST00000566239 TMEM98Q9Y2Y6 226 aa13.27□□□□□ -0.29
HACD3-208ENST00000566239 C1orf232A0A0U1RR37 186 aa13.26□□□□□ -0.29
HACD3-208ENST00000566239 INPP4BO15327 924 aa13.26□□□□□ -0.29
HACD3-208ENST00000566239 CBFA2T2O43439 604 aa13.26□□□□□ -0.29
HACD3-208ENST00000566239 AKR1B10O60218 316 aa13.26□□□□□ -0.29
HACD3-208ENST00000566239 CLDN7O95471 211 aa13.26□□□□□ -0.29
HACD3-208ENST00000566239 TMEM253P0C7T8 217 aa13.26□□□□□ -0.29
HACD3-208ENST00000566239 KDELR1P24390 212 aa13.26□□□□□ -0.29
HACD3-208ENST00000566239 PPM1FP49593 454 aaPredicted RBP13.26□□□□□ -0.29
HACD3-208ENST00000566239 LIMK2P53671 638 aa13.26□□□□□ -0.29
HACD3-208ENST00000566239 GBE1Q04446 702 aa13.26□□□□□ -0.29
HACD3-208ENST00000566239 TRA2AQ13595 282 aaKnown RBP eCLIP13.26□□□□□ -0.29
HACD3-208ENST00000566239 LY6DQ14210 128 aa13.26□□□□□ -0.29
HACD3-208ENST00000566239 MESDQ14696 234 aa13.26□□□□□ -0.29
HACD3-208ENST00000566239 C16orf72Q14CZ0 275 aa13.26□□□□□ -0.29
HACD3-208ENST00000566239 MANEAQ5SRI9 462 aa13.26□□□□□ -0.29
HACD3-208ENST00000566239 TRIM74Q86UV6 250 aa13.26□□□□□ -0.29
HACD3-208ENST00000566239 CPNE8Q86YQ8 564 aa13.26□□□□□ -0.29
HACD3-208ENST00000566239 PQLC3Q8N755 202 aa13.26□□□□□ -0.29
HACD3-208ENST00000566239 ZSCAN1Q8NBB4 408 aa13.26□□□□□ -0.29
HACD3-208ENST00000566239 CCDC112Q8NEF3 446 aa13.26□□□□□ -0.29
HACD3-208ENST00000566239 OR8K1Q8NGG5 319 aa13.26□□□□□ -0.29
HACD3-208ENST00000566239 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.26□□□□□ -0.29
HACD3-208ENST00000566239 PATE1Q8WXA2 126 aa13.26□□□□□ -0.29
HACD3-208ENST00000566239 MED8Q96G25 268 aa13.26□□□□□ -0.29
HACD3-208ENST00000566239 COX14Q96I36 57 aa13.26□□□□□ -0.29
HACD3-208ENST00000566239 SMIM14Q96QK8 99 aa13.26□□□□□ -0.29
HACD3-208ENST00000566239 LYSMD1Q96S90 227 aa13.26□□□□□ -0.29
HACD3-208ENST00000566239 NUDT22Q9BRQ3 303 aa13.26□□□□□ -0.29
HACD3-208ENST00000566239 ANP32EQ9BTT0 268 aa13.26□□□□□ -0.29
HACD3-208ENST00000566239 ZMYND15Q9H091 742 aa13.26□□□□□ -0.29
HACD3-208ENST00000566239 ZNF106Q9H2Y7 1883 aaKnown RBP13.26□□□□□ -0.29
HACD3-208ENST00000566239 KCNK4Q9NYG8 393 aa13.26□□□□□ -0.29
HACD3-208ENST00000566239 VPS18Q9P253 973 aa13.26□□□□□ -0.29
HACD3-208ENST00000566239 ST14Q9Y5Y6 855 aa13.26□□□□□ -0.29
HACD3-208ENST00000566239 KALRNO60229 2985 aa13.26□□□□□ -0.29
HACD3-208ENST00000566239 COL6A6A6NMZ7 2263 aa13.25□□□□□ -0.29
HACD3-208ENST00000566239 ATMQ13315 3056 aa13.25□□□□□ -0.29
HACD3-208ENST00000566239 IGHV5-10-1A0A0J9YXX1 117 aa13.25□□□□□ -0.29
HACD3-208ENST00000566239 SSU72P8A0A1W2PR75 194 aa13.25□□□□□ -0.29
HACD3-208ENST00000566239 LRRD1A4D1F6 860 aa13.25□□□□□ -0.29
HACD3-208ENST00000566239 RGSL1A5PLK6 1076 aa13.25□□□□□ -0.29
HACD3-208ENST00000566239 ZNF487B1APH4 448 aa13.25□□□□□ -0.29
HACD3-208ENST00000566239 ANKRD66B4E2M5 251 aa13.25□□□□□ -0.29
HACD3-208ENST00000566239 PPM1DO15297 605 aa13.25□□□□□ -0.29
HACD3-208ENST00000566239 PRLP01236 227 aa13.25□□□□□ -0.29
HACD3-208ENST00000566239 PLA2G2AP14555 144 aa13.25□□□□□ -0.29
HACD3-208ENST00000566239 CD1CP29017 333 aa13.25□□□□□ -0.29
HACD3-208ENST00000566239 ETV5P41161 510 aa13.25□□□□□ -0.29
HACD3-208ENST00000566239 CD86P42081 329 aa13.25□□□□□ -0.29
HACD3-208ENST00000566239 SPINT3P49223 89 aa13.25□□□□□ -0.29
HACD3-208ENST00000566239 GPLD1P80108 840 aa13.25□□□□□ -0.29
HACD3-208ENST00000566239 PPIDQ08752 370 aaKnown RBP13.25□□□□□ -0.29
HACD3-208ENST00000566239 NIPAL4Q0D2K0 466 aa13.25□□□□□ -0.29
HACD3-208ENST00000566239 IHHQ14623 411 aa13.25□□□□□ -0.29
HACD3-208ENST00000566239 TGIF1Q15583 401 aa13.25□□□□□ -0.29
HACD3-208ENST00000566239 ODF2Q5BJF6 829 aa13.25□□□□□ -0.29
HACD3-208ENST00000566239 ZFAND4Q86XD8 727 aa13.25□□□□□ -0.29
HACD3-208ENST00000566239 OR4D9Q8NGE8 314 aa13.25□□□□□ -0.29
HACD3-208ENST00000566239 LRRN4Q8WUT4 740 aa13.25□□□□□ -0.29
HACD3-208ENST00000566239 SGF29Q96ES7 293 aa13.25□□□□□ -0.29
HACD3-208ENST00000566239 AHCYL2Q96HN2 611 aaKnown RBP13.25□□□□□ -0.29
HACD3-208ENST00000566239 CCDC74BQ96LY2 380 aa13.25□□□□□ -0.29
HACD3-208ENST00000566239 RNF157Q96PX1 679 aa13.25□□□□□ -0.29
HACD3-208ENST00000566239 AGAP2Q99490 1192 aa13.25□□□□□ -0.29
HACD3-208ENST00000566239 MLPHQ9BV36 600 aaPredicted RBP13.25□□□□□ -0.29
HACD3-208ENST00000566239 MAK16Q9BXY0 300 aaKnown RBP13.25□□□□□ -0.29
HACD3-208ENST00000566239 PACSIN1Q9BY11 444 aa13.25□□□□□ -0.29
HACD3-208ENST00000566239 FAM83DQ9H4H8 585 aa13.25□□□□□ -0.29
HACD3-208ENST00000566239 STN1Q9H668 368 aaKnown RBP13.25□□□□□ -0.29
HACD3-208ENST00000566239 RMI1Q9H9A7 625 aa13.25□□□□□ -0.29
HACD3-208ENST00000566239 DTLQ9NZJ0 730 aa13.25□□□□□ -0.29
HACD3-208ENST00000566239 ZNHIT2Q9UHR6 403 aa13.25□□□□□ -0.29
HACD3-208ENST00000566239 PLEKHM1Q9Y4G2 1056 aa13.25□□□□□ -0.29
HACD3-208ENST00000566239 HEY1Q9Y5J3 304 aa13.25□□□□□ -0.29
HACD3-208ENST00000566239 SMG1Q96Q15 3661 aaKnown RBP13.25□□□□□ -0.29
HACD3-208ENST00000566239 IGHV1OR21-1A0A087WYE8 117 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms