RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 DENND6BQ8NEG7 585 aa12.58□□□□□ -0.4
SF3B3-206ENST00000565990 STYXQ8WUJ0 223 aa12.58□□□□□ -0.4
SF3B3-206ENST00000565990 PTCD2Q8WV60 388 aaKnown RBP12.58□□□□□ -0.4
SF3B3-206ENST00000565990 DTD2Q96FN9 168 aa12.58□□□□□ -0.4
SF3B3-206ENST00000565990 BMFQ96LC9 184 aa12.58□□□□□ -0.4
SF3B3-206ENST00000565990 HSPA12BQ96MM6 686 aa12.58□□□□□ -0.4
SF3B3-206ENST00000565990 GPR63Q9BZJ6 419 aa12.58□□□□□ -0.4
SF3B3-206ENST00000565990 ABCG8Q9H221 673 aa12.58□□□□□ -0.4
SF3B3-206ENST00000565990 DPH5Q9H2P9 285 aa12.58□□□□□ -0.4
SF3B3-206ENST00000565990 MRM3Q9HC36 420 aaKnown RBP12.58□□□□□ -0.4
SF3B3-206ENST00000565990 CHRAC1Q9NRG0 131 aa12.58□□□□□ -0.4
SF3B3-206ENST00000565990 RAD18Q9NS91 495 aa12.58□□□□□ -0.4
SF3B3-206ENST00000565990 PIH1D1Q9NWS0 290 aaKnown RBP12.58□□□□□ -0.4
SF3B3-206ENST00000565990 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.58□□□□□ -0.4
SF3B3-206ENST00000565990 PILRBQ9UKJ0 227 aa12.58□□□□□ -0.4
SF3B3-206ENST00000565990 KCTD3Q9Y597 815 aa12.58□□□□□ -0.4
SF3B3-206ENST00000565990 ARL5AQ9Y689 179 aa12.58□□□□□ -0.4
SF3B3-206ENST00000565990 R4GN57 208 aa12.58□□□□□ -0.4
SF3B3-206ENST00000565990 VPS13AQ96RL7 3174 aa12.58□□□□□ -0.4
SF3B3-206ENST00000565990 PI4KAP42356 2102 aa12.58□□□□□ -0.4
SF3B3-206ENST00000565990 USP34Q70CQ2 3546 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 PLXNB3Q9ULL4 1909 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 HEATR9A2RTY3 570 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 PRR23AA6NEV1 266 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 E7ESA3 106 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 GOLGA8MH3BSY2 632 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 H7C0S8 307 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 RAD51BO15315 384 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 SLC31A1O15431 190 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 BPIP17213 487 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 HNRNPA2B1P22626 353 aaKnown RBP12.57□□□□□ -0.4
SF3B3-206ENST00000565990 MGAT1P26572 445 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 MAOBP27338 520 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 ETV3P41162 512 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 NBL1P41271 181 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 ATP1A2P50993 1020 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 ZNF140P52738 457 aaPredicted RBP12.57□□□□□ -0.4
SF3B3-206ENST00000565990 SESN2P58004 480 aaPredicted RBP12.57□□□□□ -0.4
SF3B3-206ENST00000565990 DCDC1P59894 354 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 PTPRCAPQ14761 206 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 POU6F1Q14863 301 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 LRRC14Q15048 493 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 ACOX1Q15067 660 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 MSS51Q4VC12 460 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 TNFAIP8L3Q5GJ75 292 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 WDR45BQ5MNZ6 344 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 ESRP1Q6NXG1 681 aaKnown RBP12.57□□□□□ -0.4
SF3B3-206ENST00000565990 CEP68Q76N32 757 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 TMEM135Q86UB9 458 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 GPR26Q8NDV2 337 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 FAM174AQ8TBP5 190 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 FBXO25Q8TCJ0 367 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 KLK6Q92876 244 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 SGSM3Q96HU1 749 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 PWWP2AQ96N64 755 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 PLEKHG4BQ96PX9 1271 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 C1QTNF7Q9BXJ2 289 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 FAM83DQ9H4H8 585 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 IL26Q9NPH9 171 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 NLE1Q9NVX2 485 aaPredicted RBP12.57□□□□□ -0.4
SF3B3-206ENST00000565990 PKD2L2Q9NZM6 624 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 COQ6Q9Y2Z9 468 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 TCAF1Q9Y4C2 921 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 CACNA1HO95180 2353 aa12.57□□□□□ -0.4
SF3B3-206ENST00000565990 SDK1Q7Z5N4 2213 aa12.56□□□□□ -0.4
SF3B3-206ENST00000565990 FAM237BA0A1B0GVD1 139 aa12.56□□□□□ -0.4
SF3B3-206ENST00000565990 A0A1W2PR77 199 aa12.56□□□□□ -0.4
SF3B3-206ENST00000565990 AGAP14A8MT82 685 aa12.56□□□□□ -0.4
SF3B3-206ENST00000565990 PROB1E7EW31 1015 aa12.56□□□□□ -0.4
SF3B3-206ENST00000565990 TOR1BO14657 336 aa12.56□□□□□ -0.4
SF3B3-206ENST00000565990 TCEA3O75764 348 aa12.56□□□□□ -0.4
SF3B3-206ENST00000565990 HOXC4P09017 264 aaPredicted RBP12.56□□□□□ -0.4
SF3B3-206ENST00000565990 HOXD12P35452 270 aa12.56□□□□□ -0.4
SF3B3-206ENST00000565990 DPP6P42658 865 aa12.56□□□□□ -0.4
SF3B3-206ENST00000565990 PLTPP55058 493 aa12.56□□□□□ -0.4
SF3B3-206ENST00000565990 RACK1P63244 317 aaKnown RBP12.56□□□□□ -0.4
SF3B3-206ENST00000565990 XIAPP98170 497 aa12.56□□□□□ -0.4
SF3B3-206ENST00000565990 GUCY1A3Q02108 690 aa12.56□□□□□ -0.4
SF3B3-206ENST00000565990 SKIDA1Q1XH10 827 aa12.56□□□□□ -0.4
SF3B3-206ENST00000565990 LACTB2Q53H82 288 aaPredicted RBP12.56□□□□□ -0.4
SF3B3-206ENST00000565990 TSTD2Q5T7W7 516 aa12.56□□□□□ -0.4
SF3B3-206ENST00000565990 HENMT1Q5T8I9 393 aaKnown RBP12.56□□□□□ -0.4
SF3B3-206ENST00000565990 PNCKQ6P2M8 343 aa12.56□□□□□ -0.4
SF3B3-206ENST00000565990 ABI3BPQ7Z7G0 1075 aa12.56□□□□□ -0.4
SF3B3-206ENST00000565990 RELL1Q8IUW5 271 aa12.56□□□□□ -0.4
SF3B3-206ENST00000565990 CCNJLQ8IV13 435 aa12.56□□□□□ -0.4
SF3B3-206ENST00000565990 PDIK1LQ8N165 341 aa12.56□□□□□ -0.4
SF3B3-206ENST00000565990 MPP5Q8N3R9 675 aa12.56□□□□□ -0.4
SF3B3-206ENST00000565990 OR4K2Q8NGD2 314 aa12.56□□□□□ -0.4
SF3B3-206ENST00000565990 OR13J1Q8NGT2 312 aa12.56□□□□□ -0.4
SF3B3-206ENST00000565990 ATOH1Q92858 354 aaPredicted RBP12.56□□□□□ -0.4
SF3B3-206ENST00000565990 LRRC39Q96DD0 335 aa12.56□□□□□ -0.4
SF3B3-206ENST00000565990 NUS1Q96E22 293 aa12.56□□□□□ -0.4
SF3B3-206ENST00000565990 CDKN2AIPNLQ96HQ2 116 aa12.56□□□□□ -0.4
SF3B3-206ENST00000565990 ZNF778Q96MU6 729 aa12.56□□□□□ -0.4
SF3B3-206ENST00000565990 PLCD4Q9BRC7 762 aa12.56□□□□□ -0.4
SF3B3-206ENST00000565990 NAT9Q9BTE0 207 aa12.56□□□□□ -0.4
SF3B3-206ENST00000565990 PHACTR1Q9C0D0 580 aa12.56□□□□□ -0.4
SF3B3-206ENST00000565990 NSRP1Q9H0G5 558 aaKnown RBP12.56□□□□□ -0.4
SF3B3-206ENST00000565990 MBNL1Q9NR56 388 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms