RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 PHTF1Q9UMS5 762 aa18.88■□□□□ 0.61
SPSB3-207ENST00000565550 LOXL2Q9Y4K0 774 aa18.88■□□□□ 0.61
SPSB3-207ENST00000565550 hCG_1818297A0A087WSY0 165 aa18.87■□□□□ 0.61
SPSB3-207ENST00000565550 NUDT21O43809 227 aaKnown RBP18.87■□□□□ 0.61
SPSB3-207ENST00000565550 CEACAM5P06731 702 aa18.87■□□□□ 0.61
SPSB3-207ENST00000565550 CYP2A6P11509 494 aaPredicted RBP18.87■□□□□ 0.61
SPSB3-207ENST00000565550 CCNB1P14635 433 aa18.87■□□□□ 0.61
SPSB3-207ENST00000565550 ITIH1P19827 911 aa18.87■□□□□ 0.61
SPSB3-207ENST00000565550 CTNNA2P26232 953 aa18.87■□□□□ 0.61
SPSB3-207ENST00000565550 B4GALNT1Q00973 533 aa18.87■□□□□ 0.61
SPSB3-207ENST00000565550 TMPRSS9Q7Z410 1059 aa18.87■□□□□ 0.61
SPSB3-207ENST00000565550 NRROSQ86YC3 692 aa18.87■□□□□ 0.61
SPSB3-207ENST00000565550 BBS5Q8N3I7 341 aa18.87■□□□□ 0.61
SPSB3-207ENST00000565550 GPBAR1Q8TDU6 330 aa18.87■□□□□ 0.61
SPSB3-207ENST00000565550 NSMCE1Q8WV22 266 aa18.87■□□□□ 0.61
SPSB3-207ENST00000565550 DTD2Q96FN9 168 aa18.87■□□□□ 0.61
SPSB3-207ENST00000565550 HEMGNQ9BXL5 484 aa18.87■□□□□ 0.61
SPSB3-207ENST00000565550 MAK16Q9BXY0 300 aaKnown RBP18.87■□□□□ 0.61
SPSB3-207ENST00000565550 LZTFL1Q9NQ48 299 aa18.87■□□□□ 0.61
SPSB3-207ENST00000565550 KCTD5Q9NXV2 234 aa18.87■□□□□ 0.61
SPSB3-207ENST00000565550 PCDHA3Q9Y5H8 950 aa18.87■□□□□ 0.61
SPSB3-207ENST00000565550 ZNF487B1APH4 448 aa18.86■□□□□ 0.61
SPSB3-207ENST00000565550 B4GAT1O43505 415 aa18.86■□□□□ 0.61
SPSB3-207ENST00000565550 CST8O60676 142 aa18.86■□□□□ 0.61
SPSB3-207ENST00000565550 ZRANB2O95218 330 aaKnown RBP eCLIP18.86■□□□□ 0.61
SPSB3-207ENST00000565550 PGLSO95336 258 aa18.86■□□□□ 0.61
SPSB3-207ENST00000565550 FGF1P05230 155 aa18.86■□□□□ 0.61
SPSB3-207ENST00000565550 LHCGRP22888 699 aa18.86■□□□□ 0.61
SPSB3-207ENST00000565550 NFKBIAP25963 317 aa18.86■□□□□ 0.61
SPSB3-207ENST00000565550 MMP13P45452 471 aa18.86■□□□□ 0.61
SPSB3-207ENST00000565550 MAZP56270 477 aaKnown RBP18.86■□□□□ 0.61
SPSB3-207ENST00000565550 MARC1Q5VT66 337 aa18.86■□□□□ 0.61
SPSB3-207ENST00000565550 Q6ZVL8 140 aa18.86■□□□□ 0.61
SPSB3-207ENST00000565550 TSPAN33Q86UF1 283 aa18.86■□□□□ 0.61
SPSB3-207ENST00000565550 VSIG1Q86XK7 387 aa18.86■□□□□ 0.61
SPSB3-207ENST00000565550 CCNYQ8ND76 341 aa18.86■□□□□ 0.61
SPSB3-207ENST00000565550 EXD1Q8NHP7 514 aa18.86■□□□□ 0.61
SPSB3-207ENST00000565550 ZDHHC1Q8WTX9 485 aa18.86■□□□□ 0.61
SPSB3-207ENST00000565550 PTCD2Q8WV60 388 aaKnown RBP18.86■□□□□ 0.61
SPSB3-207ENST00000565550 SCRN2Q96FV2 425 aa18.86■□□□□ 0.61
SPSB3-207ENST00000565550 GSDMCQ9BYG8 508 aa18.86■□□□□ 0.61
SPSB3-207ENST00000565550 CEP41Q9BYV8 373 aa18.86■□□□□ 0.61
SPSB3-207ENST00000565550 NT5MQ9NPB1 228 aa18.86■□□□□ 0.61
SPSB3-207ENST00000565550 ACSL6Q9UKU0 697 aa18.86■□□□□ 0.61
SPSB3-207ENST00000565550 UNC13CQ8NB66 2214 aa18.86■□□□□ 0.61
SPSB3-207ENST00000565550 ATMQ13315 3056 aa18.85■□□□□ 0.61
SPSB3-207ENST00000565550 HELZ2Q9BYK8 2649 aaKnown RBP18.85■□□□□ 0.61
SPSB3-207ENST00000565550 A0A0U1RQS6 177 aa18.85■□□□□ 0.61
SPSB3-207ENST00000565550 GOLGA6CA6NDK9 693 aa18.85■□□□□ 0.61
SPSB3-207ENST00000565550 GOLGA6BA6NDN3 693 aa18.85■□□□□ 0.61
SPSB3-207ENST00000565550 NPIPB15A6NHN6 443 aaPredicted RBP18.85■□□□□ 0.61
SPSB3-207ENST00000565550 NVLO15381 856 aaKnown RBP18.85■□□□□ 0.61
SPSB3-207ENST00000565550 DDX3YO15523 660 aaKnown RBP18.85■□□□□ 0.61
SPSB3-207ENST00000565550 CCDC175P0C221 793 aa18.85■□□□□ 0.61
SPSB3-207ENST00000565550 GOLGA6DP0CG33 693 aa18.85■□□□□ 0.61
SPSB3-207ENST00000565550 CTPS1P17812 591 aa18.85■□□□□ 0.61
SPSB3-207ENST00000565550 AK4P27144 223 aaPredicted RBP18.85■□□□□ 0.61
SPSB3-207ENST00000565550 ETV5P41161 510 aa18.85■□□□□ 0.61
SPSB3-207ENST00000565550 GNPDA1P46926 289 aa18.85■□□□□ 0.61
SPSB3-207ENST00000565550 POLD2P49005 469 aa18.85■□□□□ 0.61
SPSB3-207ENST00000565550 OR1D5P58170 312 aa18.85■□□□□ 0.61
SPSB3-207ENST00000565550 CDK3Q00526 305 aa18.85■□□□□ 0.61
SPSB3-207ENST00000565550 ILF3Q12906 894 aaKnown RBP eCLIP18.85■□□□□ 0.61
SPSB3-207ENST00000565550 IHHQ14623 411 aa18.85■□□□□ 0.61
SPSB3-207ENST00000565550 IFI16Q16666 785 aaKnown RBP18.85■□□□□ 0.61
SPSB3-207ENST00000565550 AMZ1Q400G9 498 aa18.85■□□□□ 0.61
SPSB3-207ENST00000565550 TFDP3Q5H9I0 405 aa18.85■□□□□ 0.61
SPSB3-207ENST00000565550 RALGPS1Q5JS13 557 aa18.85■□□□□ 0.61
SPSB3-207ENST00000565550 PHF19Q5T6S3 580 aa18.85■□□□□ 0.61
SPSB3-207ENST00000565550 PEX26Q7Z412 305 aa18.85■□□□□ 0.61
SPSB3-207ENST00000565550 C17orf82Q86X59 251 aaPredicted RBP18.85■□□□□ 0.61
SPSB3-207ENST00000565550 SLITRK4Q8IW52 837 aa18.85■□□□□ 0.61
SPSB3-207ENST00000565550 RCOR2Q8IZ40 523 aa18.85■□□□□ 0.61
SPSB3-207ENST00000565550 TMEM159Q96B96 161 aa18.85■□□□□ 0.61
SPSB3-207ENST00000565550 HDAC11Q96DB2 347 aa18.85■□□□□ 0.61
SPSB3-207ENST00000565550 OLFM3Q96PB7 478 aa18.85■□□□□ 0.61
SPSB3-207ENST00000565550 CMKLR1Q99788 373 aa18.85■□□□□ 0.61
SPSB3-207ENST00000565550 FRMD8Q9BZ67 464 aaPredicted RBP18.85■□□□□ 0.61
SPSB3-207ENST00000565550 SEMA6CQ9H3T2 930 aa18.85■□□□□ 0.61
SPSB3-207ENST00000565550 RDH14Q9HBH5 336 aa18.85■□□□□ 0.61
SPSB3-207ENST00000565550 TRNAU1APQ9NX07 287 aaKnown RBP18.85■□□□□ 0.61
SPSB3-207ENST00000565550 GOLGA6AQ9NYA3 693 aa18.85■□□□□ 0.61
SPSB3-207ENST00000565550 TAAR2Q9P1P5 351 aa18.85■□□□□ 0.61
SPSB3-207ENST00000565550 AMFRQ9UKV5 643 aa18.85■□□□□ 0.61
SPSB3-207ENST00000565550 SUFUQ9UMX1 484 aa18.85■□□□□ 0.61
SPSB3-207ENST00000565550 KCNK1O00180 336 aa18.84■□□□□ 0.61
SPSB3-207ENST00000565550 PSMD11O00231 422 aa18.84■□□□□ 0.61
SPSB3-207ENST00000565550 ECEL1O95672 775 aa18.84■□□□□ 0.61
SPSB3-207ENST00000565550 HLA-DQB2P05538 268 aa18.84■□□□□ 0.61
SPSB3-207ENST00000565550 PYGMP11217 842 aa18.84■□□□□ 0.61
SPSB3-207ENST00000565550 ALDH4A1P30038 563 aa18.84■□□□□ 0.61
SPSB3-207ENST00000565550 ZBTB17Q13105 803 aa18.84■□□□□ 0.61
SPSB3-207ENST00000565550 SRSF6Q13247 344 aaKnown RBP18.84■□□□□ 0.61
SPSB3-207ENST00000565550 ARMC12Q5T9G4 340 aa18.84■□□□□ 0.61
SPSB3-207ENST00000565550 RAET1GQ6H3X3 334 aa18.84■□□□□ 0.61
SPSB3-207ENST00000565550 USP53Q70EK8 1073 aa18.84■□□□□ 0.61
SPSB3-207ENST00000565550 CCDC13Q8IYE1 715 aa18.84■□□□□ 0.61
SPSB3-207ENST00000565550 TXLNBQ8N3L3 684 aa18.84■□□□□ 0.61
SPSB3-207ENST00000565550 PIH1D2Q8WWB5 315 aa18.84■□□□□ 0.61
SPSB3-207ENST00000565550 MAML1Q92585 1016 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms