RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 SPAM1P38567 509 aa15.89■□□□□ 0.13
RAB40C-208ENST00000564703 HADHAP40939 763 aa15.89■□□□□ 0.13
RAB40C-208ENST00000564703 ID4P47928 161 aa15.89■□□□□ 0.13
RAB40C-208ENST00000564703 TERF1P54274 439 aa15.89■□□□□ 0.13
RAB40C-208ENST00000564703 EIF2B5Q13144 721 aaKnown RBP15.89■□□□□ 0.13
RAB40C-208ENST00000564703 SEPT6Q14141 434 aa15.89■□□□□ 0.13
RAB40C-208ENST00000564703 POU6F1Q14863 301 aa15.89■□□□□ 0.13
RAB40C-208ENST00000564703 HENMT1Q5T8I9 393 aaKnown RBP15.89■□□□□ 0.13
RAB40C-208ENST00000564703 PDPK2PQ6A1A2 396 aa15.89■□□□□ 0.13
RAB40C-208ENST00000564703 GATAD2AQ86YP4 633 aa15.89■□□□□ 0.13
RAB40C-208ENST00000564703 PHACTR4Q8IZ21 702 aa15.89■□□□□ 0.13
RAB40C-208ENST00000564703 PELI3Q8N2H9 469 aa15.89■□□□□ 0.13
RAB40C-208ENST00000564703 TRAM1L1Q8N609 369 aa15.89■□□□□ 0.13
RAB40C-208ENST00000564703 OR4K2Q8NGD2 314 aa15.89■□□□□ 0.13
RAB40C-208ENST00000564703 SAP25Q8TEE9 199 aa15.89■□□□□ 0.13
RAB40C-208ENST00000564703 TSACCQ96A04 125 aaPredicted RBP15.89■□□□□ 0.13
RAB40C-208ENST00000564703 AGAP2Q99490 1192 aa15.89■□□□□ 0.13
RAB40C-208ENST00000564703 BFARQ9NZS9 450 aa15.89■□□□□ 0.13
RAB40C-208ENST00000564703 APOBEC3BQ9UH17 382 aaKnown RBP15.89■□□□□ 0.13
RAB40C-208ENST00000564703 PCYOX1Q9UHG3 505 aa15.89■□□□□ 0.13
RAB40C-208ENST00000564703 APPL1Q9UKG1 709 aa15.89■□□□□ 0.13
RAB40C-208ENST00000564703 DOLKQ9UPQ8 538 aa15.89■□□□□ 0.13
RAB40C-208ENST00000564703 GLYATL1P3A0A0U1RQE8 302 aa15.88■□□□□ 0.13
RAB40C-208ENST00000564703 TMEM202A6NGA9 273 aa15.88■□□□□ 0.13
RAB40C-208ENST00000564703 SH3BP5O60239 455 aa15.88■□□□□ 0.13
RAB40C-208ENST00000564703 SDC3O75056 442 aa15.88■□□□□ 0.13
RAB40C-208ENST00000564703 PIAS2O75928 621 aa15.88■□□□□ 0.13
RAB40C-208ENST00000564703 ALPPL2P10696 532 aa15.88■□□□□ 0.13
RAB40C-208ENST00000564703 DGKAP23743 735 aa15.88■□□□□ 0.13
RAB40C-208ENST00000564703 EPHA8P29322 1005 aaPredicted RBP15.88■□□□□ 0.13
RAB40C-208ENST00000564703 GRK6P43250 576 aa15.88■□□□□ 0.13
RAB40C-208ENST00000564703 NPY2RP49146 381 aa15.88■□□□□ 0.13
RAB40C-208ENST00000564703 HK3P52790 923 aa15.88■□□□□ 0.13
RAB40C-208ENST00000564703 DR1Q01658 176 aa15.88■□□□□ 0.13
RAB40C-208ENST00000564703 ITGA9Q13797 1035 aa15.88■□□□□ 0.13
RAB40C-208ENST00000564703 SHBQ15464 509 aa15.88■□□□□ 0.13
RAB40C-208ENST00000564703 SKIDA1Q1XH10 827 aa15.88■□□□□ 0.13
RAB40C-208ENST00000564703 PRRT3Q5FWE3 981 aa15.88■□□□□ 0.13
RAB40C-208ENST00000564703 TPRG1LQ5T0D9 272 aa15.88■□□□□ 0.13
RAB40C-208ENST00000564703 DBX2Q6ZNG2 339 aa15.88■□□□□ 0.13
RAB40C-208ENST00000564703 SYDE1Q6ZW31 735 aaPredicted RBP15.88■□□□□ 0.13
RAB40C-208ENST00000564703 GDAP1Q8TB36 358 aa15.88■□□□□ 0.13
RAB40C-208ENST00000564703 LMX1AQ8TE12 382 aa15.88■□□□□ 0.13
RAB40C-208ENST00000564703 SCG3Q8WXD2 468 aaKnown RBP15.88■□□□□ 0.13
RAB40C-208ENST00000564703 CYP4F12Q9HCS2 524 aa15.88■□□□□ 0.13
RAB40C-208ENST00000564703 IL26Q9NPH9 171 aa15.88■□□□□ 0.13
RAB40C-208ENST00000564703 PIH1D1Q9NWS0 290 aaKnown RBP15.88■□□□□ 0.13
RAB40C-208ENST00000564703 DLL3Q9NYJ7 618 aa15.88■□□□□ 0.13
RAB40C-208ENST00000564703 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.88■□□□□ 0.13
RAB40C-208ENST00000564703 NFKBIL1Q9UBC1 381 aaPredicted RBP15.88■□□□□ 0.13
RAB40C-208ENST00000564703 ASIC3Q9UHC3 531 aa15.88■□□□□ 0.13
RAB40C-208ENST00000564703 HEATR9A2RTY3 570 aa15.87■□□□□ 0.13
RAB40C-208ENST00000564703 FANCGO15287 622 aa15.87■□□□□ 0.13
RAB40C-208ENST00000564703 TPSB2P20231 275 aa15.87■□□□□ 0.13
RAB40C-208ENST00000564703 CSRP1P21291 193 aaKnown RBP15.87■□□□□ 0.13
RAB40C-208ENST00000564703 ADRA1DP25100 572 aa15.87■□□□□ 0.13
RAB40C-208ENST00000564703 CKAP4Q07065 602 aaKnown RBP15.87■□□□□ 0.13
RAB40C-208ENST00000564703 MSLNQ13421 630 aaPredicted RBP15.87■□□□□ 0.13
RAB40C-208ENST00000564703 ELOCQ15369 112 aa15.87■□□□□ 0.13
RAB40C-208ENST00000564703 TPSAB1Q15661 275 aa15.87■□□□□ 0.13
RAB40C-208ENST00000564703 ALG11Q2TAA5 492 aa15.87■□□□□ 0.13
RAB40C-208ENST00000564703 CERCAMQ5T4B2 595 aa15.87■□□□□ 0.13
RAB40C-208ENST00000564703 DOK6Q6PKX4 331 aa15.87■□□□□ 0.13
RAB40C-208ENST00000564703 NLRP9Q7RTR0 991 aa15.87■□□□□ 0.13
RAB40C-208ENST00000564703 PCGF5Q86SE9 256 aa15.87■□□□□ 0.13
RAB40C-208ENST00000564703 NAXDQ8IW45 347 aa15.87■□□□□ 0.13
RAB40C-208ENST00000564703 FSTL5Q8N475 847 aaPredicted RBP15.87■□□□□ 0.13
RAB40C-208ENST00000564703 EID2Q8N6I1 236 aa15.87■□□□□ 0.13
RAB40C-208ENST00000564703 KIF18AQ8NI77 898 aa15.87■□□□□ 0.13
RAB40C-208ENST00000564703 ZNF398Q8TD17 642 aa15.87■□□□□ 0.13
RAB40C-208ENST00000564703 DTX3LQ8TDB6 740 aa15.87■□□□□ 0.13
RAB40C-208ENST00000564703 STYXQ8WUJ0 223 aa15.87■□□□□ 0.13
RAB40C-208ENST00000564703 SLCO2A1Q92959 643 aa15.87■□□□□ 0.13
RAB40C-208ENST00000564703 TTC25Q96NG3 672 aa15.87■□□□□ 0.13
RAB40C-208ENST00000564703 CDC6Q99741 560 aa15.87■□□□□ 0.13
RAB40C-208ENST00000564703 C19orf43Q9BQ61 176 aa15.87■□□□□ 0.13
RAB40C-208ENST00000564703 CASS4Q9NQ75 786 aa15.87■□□□□ 0.13
RAB40C-208ENST00000564703 TMEM98Q9Y2Y6 226 aa15.87■□□□□ 0.13
RAB40C-208ENST00000564703 KCTD3Q9Y597 815 aa15.87■□□□□ 0.13
RAB40C-208ENST00000564703 CSNK1G3Q9Y6M4 447 aa15.87■□□□□ 0.13
RAB40C-208ENST00000564703 DGKBQ9Y6T7 804 aa15.87■□□□□ 0.13
RAB40C-208ENST00000564703 FRYLO94915 3013 aa15.87■□□□□ 0.13
RAB40C-208ENST00000564703 TP53BP1Q12888 1972 aaPredicted RBP15.87■□□□□ 0.13
RAB40C-208ENST00000564703 MYO15AQ9UKN7 3530 aa15.87■□□□□ 0.13
RAB40C-208ENST00000564703 PRSS38A1L453 326 aa15.86■□□□□ 0.13
RAB40C-208ENST00000564703 DCDC2BA2VCK2 349 aa15.86■□□□□ 0.13
RAB40C-208ENST00000564703 FADS2P1A8MWK0 482 aa15.86■□□□□ 0.13
RAB40C-208ENST00000564703 TM4SF5O14894 197 aa15.86■□□□□ 0.13
RAB40C-208ENST00000564703 SCAMP1O15126 338 aa15.86■□□□□ 0.13
RAB40C-208ENST00000564703 AQP9O43315 295 aa15.86■□□□□ 0.13
RAB40C-208ENST00000564703 LDB2O43679 373 aa15.86■□□□□ 0.13
RAB40C-208ENST00000564703 SOD1P00441 154 aa15.86■□□□□ 0.13
RAB40C-208ENST00000564703 CEACAM5P06731 702 aa15.86■□□□□ 0.13
RAB40C-208ENST00000564703 ANXA6P08133 673 aa15.86■□□□□ 0.13
RAB40C-208ENST00000564703 KCNA4P22459 653 aa15.86■□□□□ 0.13
RAB40C-208ENST00000564703 GRIA1P42261 906 aa15.86■□□□□ 0.13
RAB40C-208ENST00000564703 SESN2P58004 480 aaPredicted RBP15.86■□□□□ 0.13
RAB40C-208ENST00000564703 TMPRSS15P98073 1019 aa15.86■□□□□ 0.13
RAB40C-208ENST00000564703 TUBB2AQ13885 445 aa15.86■□□□□ 0.13
RAB40C-208ENST00000564703 PTPRCAPQ14761 206 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms