RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 APPL1Q9UKG1 709 aa12.87□□□□□ -0.35
SPG7-209ENST00000564047 PRDM4Q9UKN5 801 aa12.87□□□□□ -0.35
SPG7-209ENST00000564047 ATRXP46100 2492 aa12.87□□□□□ -0.35
SPG7-209ENST00000564047 USP24Q9UPU5 2620 aa12.87□□□□□ -0.35
SPG7-209ENST00000564047 GPR179Q6PRD1 2367 aa12.86□□□□□ -0.35
SPG7-209ENST00000564047 CCDC162PA2VCL2 907 aa12.86□□□□□ -0.35
SPG7-209ENST00000564047 WNT9AO14904 365 aa12.86□□□□□ -0.35
SPG7-209ENST00000564047 MMP20O60882 483 aa12.86□□□□□ -0.35
SPG7-209ENST00000564047 ZNF217O75362 1048 aa12.86□□□□□ -0.35
SPG7-209ENST00000564047 PCDH8O95206 1070 aa12.86□□□□□ -0.35
SPG7-209ENST00000564047 GOT2P00505 430 aaKnown RBP12.86□□□□□ -0.35
SPG7-209ENST00000564047 ERVK-10P10266 1014 aa12.86□□□□□ -0.35
SPG7-209ENST00000564047 C6P13671 934 aa12.86□□□□□ -0.35
SPG7-209ENST00000564047 GM2AP17900 193 aa12.86□□□□□ -0.35
SPG7-209ENST00000564047 OXTRP30559 389 aa12.86□□□□□ -0.35
SPG7-209ENST00000564047 EIF3BP55884 814 aaKnown RBP12.86□□□□□ -0.35
SPG7-209ENST00000564047 XIAPP98170 497 aa12.86□□□□□ -0.35
SPG7-209ENST00000564047 NAB1Q13506 487 aa12.86□□□□□ -0.35
SPG7-209ENST00000564047 THOC5Q13769 683 aaKnown RBP12.86□□□□□ -0.35
SPG7-209ENST00000564047 ACOX1Q15067 660 aa12.86□□□□□ -0.35
SPG7-209ENST00000564047 AGERQ15109 404 aa12.86□□□□□ -0.35
SPG7-209ENST00000564047 ST3GAL2Q16842 350 aa12.86□□□□□ -0.35
SPG7-209ENST00000564047 HSP90AA5PQ58FG0 334 aa12.86□□□□□ -0.35
SPG7-209ENST00000564047 KIAA1161Q6NSJ0 714 aa12.86□□□□□ -0.35
SPG7-209ENST00000564047 NEPROQ6NW34 567 aa12.86□□□□□ -0.35
SPG7-209ENST00000564047 Q6ZVL8 140 aa12.86□□□□□ -0.35
SPG7-209ENST00000564047 CNTN4Q8IWV2 1026 aa12.86□□□□□ -0.35
SPG7-209ENST00000564047 UNC5BQ8IZJ1 945 aa12.86□□□□□ -0.35
SPG7-209ENST00000564047 GPR26Q8NDV2 337 aa12.86□□□□□ -0.35
SPG7-209ENST00000564047 OR6P1Q8NGX9 317 aa12.86□□□□□ -0.35
SPG7-209ENST00000564047 OR4L1Q8NH43 312 aa12.86□□□□□ -0.35
SPG7-209ENST00000564047 CALML6Q8TD86 181 aa12.86□□□□□ -0.35
SPG7-209ENST00000564047 FAM167BQ9BTA0 163 aa12.86□□□□□ -0.35
SPG7-209ENST00000564047 BTBD1Q9H0C5 482 aa12.86□□□□□ -0.35
SPG7-209ENST00000564047 SUDS3Q9H7L9 328 aaPredicted RBP12.86□□□□□ -0.35
SPG7-209ENST00000564047 PPCSQ9HAB8 311 aa12.86□□□□□ -0.35
SPG7-209ENST00000564047 IL26Q9NPH9 171 aa12.86□□□□□ -0.35
SPG7-209ENST00000564047 PPANQ9NQ55 473 aaKnown RBP12.86□□□□□ -0.35
SPG7-209ENST00000564047 KCTD5Q9NXV2 234 aa12.86□□□□□ -0.35
SPG7-209ENST00000564047 FETUBQ9UGM5 382 aa12.86□□□□□ -0.35
SPG7-209ENST00000564047 PLAAQ9Y263 795 aa12.86□□□□□ -0.35
SPG7-209ENST00000564047 GLYATL1P3A0A0U1RQE8 302 aa12.85□□□□□ -0.35
SPG7-209ENST00000564047 K7ESF4 209 aa12.85□□□□□ -0.35
SPG7-209ENST00000564047 CCL22O00626 93 aa12.85□□□□□ -0.35
SPG7-209ENST00000564047 LZTS3O60299 673 aaPredicted RBP12.85□□□□□ -0.35
SPG7-209ENST00000564047 SHOX2O60902 331 aaPredicted RBP12.85□□□□□ -0.35
SPG7-209ENST00000564047 TCEA3O75764 348 aa12.85□□□□□ -0.35
SPG7-209ENST00000564047 TM7SF2O76062 418 aa12.85□□□□□ -0.35
SPG7-209ENST00000564047 RECQL5O94762 991 aaPredicted RBP12.85□□□□□ -0.35
SPG7-209ENST00000564047 SHBGP04278 402 aa12.85□□□□□ -0.35
SPG7-209ENST00000564047 IVLP07476 585 aa12.85□□□□□ -0.35
SPG7-209ENST00000564047 HOXA6P31267 233 aa12.85□□□□□ -0.35
SPG7-209ENST00000564047 MC4RP32245 332 aa12.85□□□□□ -0.35
SPG7-209ENST00000564047 ETV3P41162 512 aa12.85□□□□□ -0.35
SPG7-209ENST00000564047 GYS2P54840 703 aa12.85□□□□□ -0.35
SPG7-209ENST00000564047 RPS21P63220 83 aaKnown RBP12.85□□□□□ -0.35
SPG7-209ENST00000564047 PEX6Q13608 980 aa12.85□□□□□ -0.35
SPG7-209ENST00000564047 MAP7D1Q3KQU3 841 aa12.85□□□□□ -0.35
SPG7-209ENST00000564047 KBTBD12Q3ZCT8 623 aa12.85□□□□□ -0.35
SPG7-209ENST00000564047 TEDDM1Q5T9Z0 273 aa12.85□□□□□ -0.35
SPG7-209ENST00000564047 MARK2Q7KZI7 788 aaKnown RBP12.85□□□□□ -0.35
SPG7-209ENST00000564047 ZNF765Q7L2R6 523 aa12.85□□□□□ -0.35
SPG7-209ENST00000564047 PTAR1Q7Z6K3 402 aaPredicted RBP12.85□□□□□ -0.35
SPG7-209ENST00000564047 FAM124AQ86V42 546 aa12.85□□□□□ -0.35
SPG7-209ENST00000564047 NLRP8Q86W28 1048 aa12.85□□□□□ -0.35
SPG7-209ENST00000564047 HORMAD1Q86X24 394 aa12.85□□□□□ -0.35
SPG7-209ENST00000564047 LRRC6Q86X45 466 aa12.85□□□□□ -0.35
SPG7-209ENST00000564047 DCLK2Q8N568 766 aa12.85□□□□□ -0.35
SPG7-209ENST00000564047 GPR150Q8NGU9 434 aa12.85□□□□□ -0.35
SPG7-209ENST00000564047 OR2T34Q8NGX1 318 aa12.85□□□□□ -0.35
SPG7-209ENST00000564047 SCG3Q8WXD2 468 aaKnown RBP12.85□□□□□ -0.35
SPG7-209ENST00000564047 ASB12Q8WXK4 309 aa12.85□□□□□ -0.35
SPG7-209ENST00000564047 DTD2Q96FN9 168 aa12.85□□□□□ -0.35
SPG7-209ENST00000564047 TMEM109Q9BVC6 243 aa12.85□□□□□ -0.35
SPG7-209ENST00000564047 FAM83DQ9H4H8 585 aa12.85□□□□□ -0.35
SPG7-209ENST00000564047 SMYD2Q9NRG4 433 aa12.85□□□□□ -0.35
SPG7-209ENST00000564047 IARS2Q9NSE4 1012 aaKnown RBP12.85□□□□□ -0.35
SPG7-209ENST00000564047 SPATA6Q9NWH7 488 aaPredicted RBP12.85□□□□□ -0.35
SPG7-209ENST00000564047 NSMCE4AQ9NXX6 385 aa12.85□□□□□ -0.35
SPG7-209ENST00000564047 IL1RAPL1Q9NZN1 696 aa12.85□□□□□ -0.35
SPG7-209ENST00000564047 ZFATQ9P243 1243 aa12.85□□□□□ -0.35
SPG7-209ENST00000564047 NFS1Q9Y697 457 aa12.85□□□□□ -0.35
SPG7-209ENST00000564047 SLC30A1Q9Y6M5 507 aa12.85□□□□□ -0.35
SPG7-209ENST00000564047 TBC1D3DA0A087WVF3 549 aa12.84□□□□□ -0.35
SPG7-209ENST00000564047 TBC1D3IA0A087WXS9 549 aa12.84□□□□□ -0.35
SPG7-209ENST00000564047 TBC1D3EA0A087X179 549 aa12.84□□□□□ -0.35
SPG7-209ENST00000564047 TBC1D3KA0A087X1G2 549 aa12.84□□□□□ -0.35
SPG7-209ENST00000564047 EXOC1LA0A1B0GW35 172 aa12.84□□□□□ -0.35
SPG7-209ENST00000564047 A0A1W2PQU0 124 aa12.84□□□□□ -0.35
SPG7-209ENST00000564047 TBC1D3FA6NER0 549 aaPredicted RBP12.84□□□□□ -0.35
SPG7-209ENST00000564047 IGLON5A6NGN9 336 aa12.84□□□□□ -0.35
SPG7-209ENST00000564047 OR51F1A6NGY5 319 aa12.84□□□□□ -0.35
SPG7-209ENST00000564047 LRRC72A6NJI9 287 aa12.84□□□□□ -0.35
SPG7-209ENST00000564047 TBC1D3LB9A6J9 549 aa12.84□□□□□ -0.35
SPG7-209ENST00000564047 GOLGA8TH3BQL2 631 aa12.84□□□□□ -0.35
SPG7-209ENST00000564047 GAPDHSO14556 408 aaPredicted RBP12.84□□□□□ -0.35
SPG7-209ENST00000564047 CD3EAPO15446 510 aaKnown RBP12.84□□□□□ -0.35
SPG7-209ENST00000564047 RNGTTO60942 597 aaKnown RBP12.84□□□□□ -0.35
SPG7-209ENST00000564047 SRP72O76094 671 aaKnown RBP12.84□□□□□ -0.35
SPG7-209ENST00000564047 TBC1D3HP0C7X1 549 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms