RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 TDRD6O60522 2096 aaKnown RBP13.35□□□□□ -0.27
CDH1-204ENST00000562118 PCNX2A6NKB5 2137 aa13.35□□□□□ -0.27
CDH1-204ENST00000562118 TP73O15350 636 aa13.35□□□□□ -0.27
CDH1-204ENST00000562118 CBFA2T3O75081 653 aa13.35□□□□□ -0.27
CDH1-204ENST00000562118 TMEM63AO94886 807 aa13.35□□□□□ -0.27
CDH1-204ENST00000562118 GAS8O95995 478 aa13.35□□□□□ -0.27
CDH1-204ENST00000562118 APRTP07741 180 aa13.35□□□□□ -0.27
CDH1-204ENST00000562118 SDHBP21912 280 aa13.35□□□□□ -0.27
CDH1-204ENST00000562118 LPOP22079 712 aaPredicted RBP13.35□□□□□ -0.27
CDH1-204ENST00000562118 PAFAH1B1P43034 410 aa13.35□□□□□ -0.27
CDH1-204ENST00000562118 TNNT3P45378 269 aaPredicted RBP13.35□□□□□ -0.27
CDH1-204ENST00000562118 XIAPP98170 497 aa13.35□□□□□ -0.27
CDH1-204ENST00000562118 DHX34Q14147 1143 aaKnown RBP13.35□□□□□ -0.27
CDH1-204ENST00000562118 RNASEH2BQ5TBB1 312 aaKnown RBP13.35□□□□□ -0.27
CDH1-204ENST00000562118 KCTD16Q68DU8 428 aa13.35□□□□□ -0.27
CDH1-204ENST00000562118 GSTA5Q7RTV2 222 aa13.35□□□□□ -0.27
CDH1-204ENST00000562118 NAT8LQ8N9F0 302 aa13.35□□□□□ -0.27
CDH1-204ENST00000562118 MCUQ8NE86 351 aa13.35□□□□□ -0.27
CDH1-204ENST00000562118 OR52K1Q8NGK4 314 aa13.35□□□□□ -0.27
CDH1-204ENST00000562118 BLOC1S5Q8TDH9 187 aa13.35□□□□□ -0.27
CDH1-204ENST00000562118 WDR92Q96MX6 357 aa13.35□□□□□ -0.27
CDH1-204ENST00000562118 FGF22Q9HCT0 170 aa13.35□□□□□ -0.27
CDH1-204ENST00000562118 TM7SF3Q9NS93 570 aa13.35□□□□□ -0.27
CDH1-204ENST00000562118 CD84Q9UIB8 345 aa13.35□□□□□ -0.27
CDH1-204ENST00000562118 CDC23Q9UJX2 597 aa13.35□□□□□ -0.27
CDH1-204ENST00000562118 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.34□□□□□ -0.27
CDH1-204ENST00000562118 TCRBV7S3A2A0A539 114 aa13.34□□□□□ -0.27
CDH1-204ENST00000562118 TMEM202A6NGA9 273 aa13.34□□□□□ -0.27
CDH1-204ENST00000562118 C2orf81A6NN90 581 aa13.34□□□□□ -0.27
CDH1-204ENST00000562118 C4orf47A7E2U8 309 aa13.34□□□□□ -0.27
CDH1-204ENST00000562118 AP3B1O00203 1094 aa13.34□□□□□ -0.27
CDH1-204ENST00000562118 PIAS2O75928 621 aa13.34□□□□□ -0.27
CDH1-204ENST00000562118 CRTAMO95727 393 aa13.34□□□□□ -0.27
CDH1-204ENST00000562118 FUCA1P04066 466 aa13.34□□□□□ -0.27
CDH1-204ENST00000562118 CEACAM5P06731 702 aa13.34□□□□□ -0.27
CDH1-204ENST00000562118 IVLP07476 585 aa13.34□□□□□ -0.27
CDH1-204ENST00000562118 MLNP12872 115 aa13.34□□□□□ -0.27
CDH1-204ENST00000562118 SPAM1P38567 509 aa13.34□□□□□ -0.27
CDH1-204ENST00000562118 ARRB1P49407 418 aaPredicted RBP13.34□□□□□ -0.27
CDH1-204ENST00000562118 GPS1Q13098 491 aa13.34□□□□□ -0.27
CDH1-204ENST00000562118 ALG11Q2TAA5 492 aa13.34□□□□□ -0.27
CDH1-204ENST00000562118 ANKRD22Q5VYY1 191 aa13.34□□□□□ -0.27
CDH1-204ENST00000562118 DENND2CQ68D51 928 aa13.34□□□□□ -0.27
CDH1-204ENST00000562118 RAET1GQ6H3X3 334 aa13.34□□□□□ -0.27
CDH1-204ENST00000562118 LRRC8BQ6P9F7 803 aa13.34□□□□□ -0.27
CDH1-204ENST00000562118 CAND1Q86VP6 1230 aaKnown RBP13.34□□□□□ -0.27
CDH1-204ENST00000562118 OR56A4Q8NGH8 313 aa13.34□□□□□ -0.27
CDH1-204ENST00000562118 SGSM3Q96HU1 749 aa13.34□□□□□ -0.27
CDH1-204ENST00000562118 GTPBP2Q9BX10 602 aaKnown RBP13.34□□□□□ -0.27
CDH1-204ENST00000562118 PHPT1Q9NRX4 125 aaPredicted RBP13.34□□□□□ -0.27
CDH1-204ENST00000562118 NLE1Q9NVX2 485 aaPredicted RBP13.34□□□□□ -0.27
CDH1-204ENST00000562118 VPS18Q9P253 973 aa13.34□□□□□ -0.27
CDH1-204ENST00000562118 MRFAP1Q9Y605 127 aa13.34□□□□□ -0.27
CDH1-204ENST00000562118 CSNK1G3Q9Y6M4 447 aa13.34□□□□□ -0.27
CDH1-204ENST00000562118 TRBV5-4A0A0C4DH59 114 aa13.33□□□□□ -0.28
CDH1-204ENST00000562118 PRR19A6NJB7 356 aa13.33□□□□□ -0.28
CDH1-204ENST00000562118 GPR89AB7ZAQ6 455 aa13.33□□□□□ -0.28
CDH1-204ENST00000562118 BHMG1C9JSJ3 638 aaPredicted RBP13.33□□□□□ -0.28
CDH1-204ENST00000562118 CACNB4O00305 520 aaPredicted RBP13.33□□□□□ -0.28
CDH1-204ENST00000562118 FLRT2O43155 660 aa13.33□□□□□ -0.28
CDH1-204ENST00000562118 GPR89BP0CG08 455 aa13.33□□□□□ -0.28
CDH1-204ENST00000562118 CSRP1P21291 193 aaKnown RBP13.33□□□□□ -0.28
CDH1-204ENST00000562118 KELP23276 732 aa13.33□□□□□ -0.28
CDH1-204ENST00000562118 HTR1BP28222 390 aa13.33□□□□□ -0.28
CDH1-204ENST00000562118 GPR1P46091 355 aa13.33□□□□□ -0.28
CDH1-204ENST00000562118 HK3P52790 923 aa13.33□□□□□ -0.28
CDH1-204ENST00000562118 THOP1P52888 689 aa13.33□□□□□ -0.28
CDH1-204ENST00000562118 HNRNPKP61978 463 aaKnown RBP eCLIP13.33□□□□□ -0.28
CDH1-204ENST00000562118 BASP1P80723 227 aaKnown RBP13.33□□□□□ -0.28
CDH1-204ENST00000562118 PEX6Q13608 980 aa13.33□□□□□ -0.28
CDH1-204ENST00000562118 TUBB2AQ13885 445 aa13.33□□□□□ -0.28
CDH1-204ENST00000562118 TRIP13Q15645 432 aaPredicted RBP13.33□□□□□ -0.28
CDH1-204ENST00000562118 WHAMMP3Q1A5X7 153 aa13.33□□□□□ -0.28
CDH1-204ENST00000562118 HOOK3Q86VS8 718 aa13.33□□□□□ -0.28
CDH1-204ENST00000562118 JAMLQ86YT9 394 aa13.33□□□□□ -0.28
CDH1-204ENST00000562118 SDR16C5Q8N3Y7 309 aa13.33□□□□□ -0.28
CDH1-204ENST00000562118 SLC25A45Q8N413 288 aa13.33□□□□□ -0.28
CDH1-204ENST00000562118 OR4K2Q8NGD2 314 aa13.33□□□□□ -0.28
CDH1-204ENST00000562118 OR13J1Q8NGT2 312 aa13.33□□□□□ -0.28
CDH1-204ENST00000562118 STYXQ8WUJ0 223 aa13.33□□□□□ -0.28
CDH1-204ENST00000562118 PTCD2Q8WV60 388 aaKnown RBP13.33□□□□□ -0.28
CDH1-204ENST00000562118 BTN2A2Q8WVV5 523 aa13.33□□□□□ -0.28
CDH1-204ENST00000562118 OR1E3Q8WZA6 343 aa13.33□□□□□ -0.28
CDH1-204ENST00000562118 GLYATL1Q969I3 302 aa13.33□□□□□ -0.28
CDH1-204ENST00000562118 HIC2Q96JB3 615 aa13.33□□□□□ -0.28
CDH1-204ENST00000562118 RTKNQ9BST9 563 aa13.33□□□□□ -0.28
CDH1-204ENST00000562118 TUBB2BQ9BVA1 445 aa13.33□□□□□ -0.28
CDH1-204ENST00000562118 MRM3Q9HC36 420 aaKnown RBP13.33□□□□□ -0.28
CDH1-204ENST00000562118 PKP3Q9Y446 797 aa13.33□□□□□ -0.28
CDH1-204ENST00000562118 KCTD3Q9Y597 815 aa13.33□□□□□ -0.28
CDH1-204ENST00000562118 COL27A1Q8IZC6 1860 aaPredicted RBP13.32□□□□□ -0.28
CDH1-204ENST00000562118 PRSS38A1L453 326 aa13.32□□□□□ -0.28
CDH1-204ENST00000562118 HEATR9A2RTY3 570 aa13.32□□□□□ -0.28
CDH1-204ENST00000562118 E7EVH7 732 aa13.32□□□□□ -0.28
CDH1-204ENST00000562118 DNALI1O14645 258 aaPredicted RBP13.32□□□□□ -0.28
CDH1-204ENST00000562118 CHUKO15111 745 aa13.32□□□□□ -0.28
CDH1-204ENST00000562118 DNAJC6O75061 913 aa13.32□□□□□ -0.28
CDH1-204ENST00000562118 DGKAP23743 735 aa13.32□□□□□ -0.28
CDH1-204ENST00000562118 ADRA1DP25100 572 aa13.32□□□□□ -0.28
CDH1-204ENST00000562118 CA5AP35218 305 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms