RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 TBC1D29Q9UFV1 150 aa11.61□□□□□ -0.55
NSMCE1-202ENST00000561960 ANAPC2Q9UJX6 822 aa11.61□□□□□ -0.55
NSMCE1-202ENST00000561960 SLC17A4Q9Y2C5 497 aa11.61□□□□□ -0.55
NSMCE1-202ENST00000561960 TTLL3Q9Y4R7 772 aa11.61□□□□□ -0.55
NSMCE1-202ENST00000561960 CDC14CA4D256 554 aa11.6□□□□□ -0.55
NSMCE1-202ENST00000561960 PDE2AO00408 941 aaPredicted RBP11.6□□□□□ -0.55
NSMCE1-202ENST00000561960 NTRK1P04629 796 aa11.6□□□□□ -0.55
NSMCE1-202ENST00000561960 IVLP07476 585 aa11.6□□□□□ -0.55
NSMCE1-202ENST00000561960 ERCC5P28715 1186 aaPredicted RBP11.6□□□□□ -0.55
NSMCE1-202ENST00000561960 CSNK1DP48730 415 aa11.6□□□□□ -0.55
NSMCE1-202ENST00000561960 AP1S1P61966 158 aa11.6□□□□□ -0.55
NSMCE1-202ENST00000561960 MC2RQ01718 297 aa11.6□□□□□ -0.55
NSMCE1-202ENST00000561960 HHEXQ03014 270 aa11.6□□□□□ -0.55
NSMCE1-202ENST00000561960 IL10RBQ08334 325 aa11.6□□□□□ -0.55
NSMCE1-202ENST00000561960 ITKQ08881 620 aa11.6□□□□□ -0.55
NSMCE1-202ENST00000561960 TRA2AQ13595 282 aaKnown RBP eCLIP11.6□□□□□ -0.55
NSMCE1-202ENST00000561960 BECN1Q14457 450 aa11.6□□□□□ -0.55
NSMCE1-202ENST00000561960 SEPT7Q16181 437 aaKnown RBP11.6□□□□□ -0.55
NSMCE1-202ENST00000561960 PYCR3Q53H96 274 aa11.6□□□□□ -0.55
NSMCE1-202ENST00000561960 TMCO4Q5TGY1 634 aa11.6□□□□□ -0.55
NSMCE1-202ENST00000561960 GALNT13Q8IUC8 556 aa11.6□□□□□ -0.55
NSMCE1-202ENST00000561960 MCOLN2Q8IZK6 566 aa11.6□□□□□ -0.55
NSMCE1-202ENST00000561960 TTC30BQ8N4P2 665 aa11.6□□□□□ -0.55
NSMCE1-202ENST00000561960 OR10G6Q8NH81 332 aa11.6□□□□□ -0.55
NSMCE1-202ENST00000561960 HSPH1Q92598 858 aa11.6□□□□□ -0.55
NSMCE1-202ENST00000561960 AP2M1Q96CW1 435 aa11.6□□□□□ -0.55
NSMCE1-202ENST00000561960 RIOK2Q9BVS4 552 aaKnown RBP11.6□□□□□ -0.55
NSMCE1-202ENST00000561960 ULBP3Q9BZM4 244 aa11.6□□□□□ -0.55
NSMCE1-202ENST00000561960 ZWILCHQ9H900 591 aa11.6□□□□□ -0.55
NSMCE1-202ENST00000561960 NT5MQ9NPB1 228 aa11.6□□□□□ -0.55
NSMCE1-202ENST00000561960 TMEM51Q9NW97 253 aa11.6□□□□□ -0.55
NSMCE1-202ENST00000561960 CROTQ9UKG9 612 aa11.6□□□□□ -0.55
NSMCE1-202ENST00000561960 SIK3Q9Y2K2 1263 aa11.6□□□□□ -0.55
NSMCE1-202ENST00000561960 RPS6KL1Q9Y6S9 549 aa11.6□□□□□ -0.55
NSMCE1-202ENST00000561960 ESPL1Q14674 2120 aa11.6□□□□□ -0.55
NSMCE1-202ENST00000561960 CCDC88CQ9P219 2028 aa11.6□□□□□ -0.55
NSMCE1-202ENST00000561960 CFAP69A5D8W1 941 aa11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 B4E171 279 aa11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 HTRA2O43464 458 aaPredicted RBP11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 KIF1CO43896 1103 aaKnown RBP11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 AGFG2O95081 481 aa11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 PEX11BO96011 259 aa11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 SLC4A1P02730 911 aa11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 MIPP30301 263 aa11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 TSPAN7P41732 249 aa11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 STAT5AP42229 794 aa11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 GSCP56915 257 aaPredicted RBP11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 RAB15P59190 212 aa11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 UBE2HP62256 183 aa11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 RPS18P62269 152 aaKnown RBP11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 IHHQ14623 411 aa11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 PRR30Q53SZ7 412 aaPredicted RBP11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 ERMARDQ5T6L9 678 aa11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 CEACAM20Q6UY09 585 aa11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 ASB18Q6ZVZ8 466 aa11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 ARHGAP22Q7Z5H3 698 aa11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 TECPR1Q7Z6L1 1165 aa11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 SFRP1Q8N474 314 aa11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 TEX19Q8NA77 164 aa11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 NEK11Q8NG66 645 aa11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 CATSPER2Q96P56 530 aa11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 TGM7Q96PF1 710 aa11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 PSKH2Q96QS6 385 aa11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 TRIM55Q9BYV6 548 aa11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 SPRY4Q9C004 299 aa11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 OSGEPL1Q9H4B0 414 aa11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 PRDM8Q9NQV8 689 aa11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 RCOR3Q9P2K3 495 aaPredicted RBP11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 MYO1AQ9UBC5 1043 aa11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 TRIM10Q9UDY6 481 aa11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 PLEKHB1Q9UF11 243 aaPredicted RBP11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 TUBD1Q9UJT1 453 aa11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 KCNMB2Q9Y691 235 aa11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 CREBBPQ92793 2442 aa11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 SPTBP11277 2137 aa11.59□□□□□ -0.55
NSMCE1-202ENST00000561960 HIVEP3Q5T1R4 2406 aa11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 POLR1CO15160 346 aaPredicted RBP11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 DDX3YO15523 660 aaKnown RBP11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 ZW10O43264 779 aa11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 SEMA7AO75326 666 aa11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 KIAA0754O94854 1291 aa11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 PGLSO95336 258 aa11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 CLDN7O95471 211 aa11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 DLGAP3O95886 979 aa11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 ATXN8OSP0DMR3 200 aa11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 CYP2A6P11509 494 aaPredicted RBP11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 EEF1GP26641 437 aaKnown RBP11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 MAP4P27816 1152 aaKnown RBP11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 IL1R2P27930 398 aa11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 LEPRP48357 1165 aaKnown RBP11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 GPLD1P80108 840 aa11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 DSC2Q02487 901 aa11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 PTSQ03393 145 aa11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 NSUN2Q08J23 767 aaKnown RBP eCLIP11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 KLRB1Q12918 225 aa11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 MAMLD1Q13495 774 aa11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 DPYSQ14117 519 aa11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 SEPT6Q14141 434 aa11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 FKBP15Q5T1M5 1219 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms