RNA–Protein interactions for RNA: ENST00000560260.5

SNX1-210, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 1,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-210ENST00000560260 GPR1P46091 355 aa21.66■■□□□ 1.06
SNX1-210ENST00000560260 ARSDP51689 593 aa21.66■■□□□ 1.06
SNX1-210ENST00000560260 XIAPP98170 497 aa21.66■■□□□ 1.06
SNX1-210ENST00000560260 CDK3Q00526 305 aa21.66■■□□□ 1.06
SNX1-210ENST00000560260 OVGP1Q12889 678 aa21.66■■□□□ 1.06
SNX1-210ENST00000560260 PDE1CQ14123 709 aaPredicted RBP21.66■■□□□ 1.06
SNX1-210ENST00000560260 MORF4L2Q15014 288 aa21.66■■□□□ 1.06
SNX1-210ENST00000560260 TRADDQ15628 312 aa21.66■■□□□ 1.06
SNX1-210ENST00000560260 FAM151BQ6UXP7 276 aa21.66■■□□□ 1.06
SNX1-210ENST00000560260 ADAMTSL4Q6UY14 1074 aa21.66■■□□□ 1.06
SNX1-210ENST00000560260 TRIM74Q86UV6 250 aa21.66■■□□□ 1.06
SNX1-210ENST00000560260 PLEKHG4BQ96PX9 1271 aa21.66■■□□□ 1.06
SNX1-210ENST00000560260 NUSAP1Q9BXS6 441 aaKnown RBP21.66■■□□□ 1.06
SNX1-210ENST00000560260 TEX101Q9BY14 249 aa21.66■■□□□ 1.06
SNX1-210ENST00000560260 WDR26Q9H7D7 661 aa21.66■■□□□ 1.06
SNX1-210ENST00000560260 XAB2Q9HCS7 855 aaKnown RBP21.66■■□□□ 1.06
SNX1-210ENST00000560260 NLE1Q9NVX2 485 aaPredicted RBP21.66■■□□□ 1.06
SNX1-210ENST00000560260 LRP4O75096 1905 aa21.66■■□□□ 1.06
SNX1-210ENST00000560260 DNAH14Q0VDD8 3507 aa21.65■■□□□ 1.06
SNX1-210ENST00000560260 HEATR9A2RTY3 570 aa21.65■■□□□ 1.06
SNX1-210ENST00000560260 BHMG1C9JSJ3 638 aaPredicted RBP21.65■■□□□ 1.06
SNX1-210ENST00000560260 INPP4BO15327 924 aa21.65■■□□□ 1.06
SNX1-210ENST00000560260 BANF1O75531 89 aa21.65■■□□□ 1.06
SNX1-210ENST00000560260 ADRA1DP25100 572 aa21.65■■□□□ 1.06
SNX1-210ENST00000560260 NPY2RP49146 381 aa21.65■■□□□ 1.06
SNX1-210ENST00000560260 C21orf59P57076 290 aa21.65■■□□□ 1.06
SNX1-210ENST00000560260 YPEL5P62699 121 aa21.65■■□□□ 1.06
SNX1-210ENST00000560260 PEX6Q13608 980 aa21.65■■□□□ 1.06
SNX1-210ENST00000560260 FZD2Q14332 565 aa21.65■■□□□ 1.06
SNX1-210ENST00000560260 NFATC4Q14934 902 aa21.65■■□□□ 1.06
SNX1-210ENST00000560260 CHRNA6Q15825 494 aa21.65■■□□□ 1.06
SNX1-210ENST00000560260 MSS51Q4VC12 460 aa21.65■■□□□ 1.06
SNX1-210ENST00000560260 DNTTIP2Q5QJE6 756 aaKnown RBP21.65■■□□□ 1.06
SNX1-210ENST00000560260 PRAMEF14Q5SWL7 426 aa21.65■■□□□ 1.06
SNX1-210ENST00000560260 FNBP1LQ5T0N5 605 aa21.65■■□□□ 1.06
SNX1-210ENST00000560260 TSTD2Q5T7W7 516 aa21.65■■□□□ 1.06
SNX1-210ENST00000560260 PRR23CQ6ZRP0 262 aa21.65■■□□□ 1.06
SNX1-210ENST00000560260 PCGF5Q86SE9 256 aa21.65■■□□□ 1.06
SNX1-210ENST00000560260 TRAM1L1Q8N609 369 aa21.65■■□□□ 1.06
SNX1-210ENST00000560260 OR13J1Q8NGT2 312 aa21.65■■□□□ 1.06
SNX1-210ENST00000560260 FAM174AQ8TBP5 190 aa21.65■■□□□ 1.06
SNX1-210ENST00000560260 TRIM56Q9BRZ2 755 aaKnown RBP21.65■■□□□ 1.06
SNX1-210ENST00000560260 SPATA16Q9BXB7 569 aa21.65■■□□□ 1.06
SNX1-210ENST00000560260 RAD18Q9NS91 495 aa21.65■■□□□ 1.06
SNX1-210ENST00000560260 BFARQ9NZS9 450 aa21.65■■□□□ 1.06
SNX1-210ENST00000560260 PLXNB3Q9ULL4 1909 aa21.64■■□□□ 1.06
SNX1-210ENST00000560260 GLYATL1P3A0A0U1RQE8 302 aa21.64■■□□□ 1.05
SNX1-210ENST00000560260 SPTY2D1-AS1A0A0U1RR47 76 aa21.64■■□□□ 1.05
SNX1-210ENST00000560260 ESYT3A0FGR9 886 aa21.64■■□□□ 1.05
SNX1-210ENST00000560260 ARHGAP33O14559 1287 aa21.64■■□□□ 1.05
SNX1-210ENST00000560260 KIAA1024LP59773 190 aa21.64■■□□□ 1.05
SNX1-210ENST00000560260 SARNPP82979 210 aaKnown RBP21.64■■□□□ 1.05
SNX1-210ENST00000560260 EIF2B5Q13144 721 aaKnown RBP21.64■■□□□ 1.05
SNX1-210ENST00000560260 ATP13A5Q4VNC0 1218 aa21.64■■□□□ 1.05
SNX1-210ENST00000560260 PCID2Q5JVF3 399 aa21.64■■□□□ 1.05
SNX1-210ENST00000560260 PPHLN1Q8NEY8 458 aaKnown RBP21.64■■□□□ 1.05
SNX1-210ENST00000560260 STYXQ8WUJ0 223 aa21.64■■□□□ 1.05
SNX1-210ENST00000560260 PTCD2Q8WV60 388 aaKnown RBP21.64■■□□□ 1.05
SNX1-210ENST00000560260 COX14Q96I36 57 aa21.64■■□□□ 1.05
SNX1-210ENST00000560260 ZSCAN5AQ9BUG6 496 aa21.64■■□□□ 1.05
SNX1-210ENST00000560260 IL22Q9GZX6 179 aa21.64■■□□□ 1.05
SNX1-210ENST00000560260 CDH19Q9H159 772 aa21.64■■□□□ 1.05
SNX1-210ENST00000560260 IL21RQ9HBE5 538 aa21.64■■□□□ 1.05
SNX1-210ENST00000560260 CHRAC1Q9NRG0 131 aa21.64■■□□□ 1.05
SNX1-210ENST00000560260 DMGDHQ9UI17 866 aaKnown RBP21.64■■□□□ 1.05
SNX1-210ENST00000560260 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.64■■□□□ 1.05
SNX1-210ENST00000560260 OAS3Q9Y6K5 1087 aaKnown RBP21.64■■□□□ 1.05
SNX1-210ENST00000560260 ZNF292O60281 2723 aa21.64■■□□□ 1.05
SNX1-210ENST00000560260 KNL1Q8NG31 2342 aa21.64■■□□□ 1.05
SNX1-210ENST00000560260 TMEM202A6NGA9 273 aa21.63■■□□□ 1.05
SNX1-210ENST00000560260 AP3B1O00203 1094 aa21.63■■□□□ 1.05
SNX1-210ENST00000560260 TOR1BO14657 336 aa21.63■■□□□ 1.05
SNX1-210ENST00000560260 PPFIA2O75334 1257 aa21.63■■□□□ 1.05
SNX1-210ENST00000560260 MYCLP1P12525 358 aaPredicted RBP21.63■■□□□ 1.05
SNX1-210ENST00000560260 PDE1BQ01064 536 aa21.63■■□□□ 1.05
SNX1-210ENST00000560260 ACVR1Q04771 509 aa21.63■■□□□ 1.05
SNX1-210ENST00000560260 ZDHHC20Q5W0Z9 365 aa21.63■■□□□ 1.05
SNX1-210ENST00000560260 MACC1Q6ZN28 852 aa21.63■■□□□ 1.05
SNX1-210ENST00000560260 SIGLEC10Q96LC7 697 aa21.63■■□□□ 1.05
SNX1-210ENST00000560260 C19orf43Q9BQ61 176 aa21.63■■□□□ 1.05
SNX1-210ENST00000560260 WDR83Q9BRX9 315 aaKnown RBP21.63■■□□□ 1.05
SNX1-210ENST00000560260 RAB17Q9H0T7 212 aa21.63■■□□□ 1.05
SNX1-210ENST00000560260 SUDS3Q9H7L9 328 aaPredicted RBP21.63■■□□□ 1.05
SNX1-210ENST00000560260 FGF22Q9HCT0 170 aa21.63■■□□□ 1.05
SNX1-210ENST00000560260 ARFGAP3Q9NP61 516 aa21.63■■□□□ 1.05
SNX1-210ENST00000560260 GDF3Q9NR23 364 aa21.63■■□□□ 1.05
SNX1-210ENST00000560260 WHRNQ9P202 907 aa21.63■■□□□ 1.05
SNX1-210ENST00000560260 KLF15Q9UIH9 416 aa21.63■■□□□ 1.05
SNX1-210ENST00000560260 ANAPC5Q9UJX4 755 aa21.63■■□□□ 1.05
SNX1-210ENST00000560260 RIF1Q5UIP0 2472 aaKnown RBP21.62■■□□□ 1.05
SNX1-210ENST00000560260 H7C0S8 307 aa21.62■■□□□ 1.05
SNX1-210ENST00000560260 UGT1A9O60656 530 aa21.62■■□□□ 1.05
SNX1-210ENST00000560260 PRAMEF1O95521 474 aa21.62■■□□□ 1.05
SNX1-210ENST00000560260 HOXC4P09017 264 aaPredicted RBP21.62■■□□□ 1.05
SNX1-210ENST00000560260 PRSS56P0CW18 603 aa21.62■■□□□ 1.05
SNX1-210ENST00000560260 UGT1A6P19224 532 aa21.62■■□□□ 1.05
SNX1-210ENST00000560260 UGT1A1P22309 533 aa21.62■■□□□ 1.05
SNX1-210ENST00000560260 UGT1A4P22310 534 aa21.62■■□□□ 1.05
SNX1-210ENST00000560260 NMBRP28336 390 aa21.62■■□□□ 1.05
SNX1-210ENST00000560260 UGT1A3P35503 534 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms