RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 TRIM13O60858 407 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 AMD1P17707 334 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 KELP23276 732 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 RPL5P46777 297 aaKnown RBP10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 PTK2BQ14289 1009 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 DCAF12L1Q5VU92 463 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 SCD5Q86SK9 330 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 DHDDSQ86SQ9 333 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 SPPL3Q8TCT6 385 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 IGSF8Q969P0 613 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 DNAJC1Q96KC8 554 aaKnown RBP10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 FAM126AQ9BYI3 521 aaPredicted RBP10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 LRRC4CQ9HCJ2 640 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 ZDHHC7Q9NXF8 308 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 VWA7Q9Y334 891 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 TRBV23OR9-2A0A075B6M9 112 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 DEAF1O75398 565 aaPredicted RBP10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 RPP40O75818 363 aaKnown RBP10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 USP1O94782 785 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 PCNAP12004 261 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 TRPC1P48995 793 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 NAB1Q13506 487 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 ATP1A4Q13733 1029 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 RBM44Q6ZP01 1051 aaKnown RBP10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 SPATA6LQ8N4H0 392 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 STYXQ8WUJ0 223 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 CNDP1Q96KN2 507 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 ZDHHC4Q9NPG8 344 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 CACNA2D2Q9NY47 1150 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 ASF1AQ9Y294 204 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 MYH10P35580 1976 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 H0YGN5 161 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 DCXO43602 365 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 SH3BGRLO75368 114 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 PRAMEF1O95521 474 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 ABHD2P08910 425 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 DLDP09622 509 aaKnown RBP10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 HOXB2P14652 356 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 CCNG1P51959 295 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 SLC1A5Q15758 541 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 SPDYE7PQ495Y7 208 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 GALNTL6Q49A17 601 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 TCEAL5Q5H9L2 206 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 ANO7Q6IWH7 933 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 DRICH1Q6PGQ1 229 aaPredicted RBP10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 NKAPQ8N5F7 415 aaKnown RBP10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 TMEM79Q9BSE2 394 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 LMAN2LQ9H0V9 348 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 LINC00597Q9H2U6 94 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 THAP1Q9NVV9 213 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 MARCH5Q9NX47 278 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 ELOVL2Q9NXB9 296 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 GRHL1Q9NZI5 618 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 FNIP2Q9P278 1114 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 NKX1-2Q9UD57 310 aaPredicted RBP10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 MAFFQ9ULX9 164 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 NFS1Q9Y697 457 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 FTH1P02794 183 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 TFEBP19484 476 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 SPAM1P38567 509 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 NEK2P51955 445 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 FASTKD3Q14CZ7 662 aaKnown RBP10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 PFKFB4Q16877 469 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 PITRM1Q5JRX3 1037 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 MFSD4BQ5TF39 518 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 FAM45BPQ6NSW5 357 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 GDPD4Q6W3E5 623 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 TMEM25Q86YD3 366 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 SLC22A9Q8IVM8 553 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 ULK2Q8IYT8 1036 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 DCAF4L2Q8NA75 395 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 GSTCDQ8NEC7 633 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 STAG3L4Q8TBR4 150 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 FAM45AQ8TCE6 357 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 CEP19Q96LK0 163 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 ZNF599Q96NL3 588 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 FCRL5Q96RD9 977 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 CDCA3Q99618 268 aaPredicted RBP10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 TMEM165Q9HC07 324 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 QSOX1O00391 747 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 ITGA2BP08514 1039 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 SLC35G4P0C7Q5 338 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 IGFBP6P24592 240 aaPredicted RBP10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 MRPS15P82914 257 aaKnown RBP10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 PLIN5Q00G26 463 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 ILF2Q12905 390 aaKnown RBP10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 C9orf50Q5SZB4 431 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 RNASEH2BQ5TBB1 312 aaKnown RBP10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 MSANTD2Q6P1R3 559 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 ZBTB49Q6ZSB9 765 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 PATL1Q86TB9 770 aaKnown RBP10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 ALYREFQ86V81 257 aaKnown RBP10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 CLVS1Q8IUQ0 354 aaPredicted RBP10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 PQLC3Q8N755 202 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 TCEAL4Q96EI5 215 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 C1orf74Q96LT6 269 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 COPS7BQ9H9Q2 264 aaPredicted RBP10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 IL1RL2Q9HB29 575 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 IGSF9Q9P2J2 1179 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 VPS51Q9UID3 782 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms