RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 PTK6Q13882 451 aa11.37□□□□□ -0.59
SNX1-204ENST00000559061 TAF1AQ15573 450 aaPredicted RBP11.37□□□□□ -0.59
SNX1-204ENST00000559061 TPSAB1Q15661 275 aa11.37□□□□□ -0.59
SNX1-204ENST00000559061 UAP1L1Q3KQV9 507 aa11.37□□□□□ -0.59
SNX1-204ENST00000559061 CAND1Q86VP6 1230 aaKnown RBP11.37□□□□□ -0.59
SNX1-204ENST00000559061 FAM174AQ8TBP5 190 aa11.37□□□□□ -0.59
SNX1-204ENST00000559061 TSACCQ96A04 125 aaPredicted RBP11.37□□□□□ -0.59
SNX1-204ENST00000559061 SCARF2Q96GP6 870 aaPredicted RBP11.37□□□□□ -0.59
SNX1-204ENST00000559061 DNAJC1Q96KC8 554 aaKnown RBP11.37□□□□□ -0.59
SNX1-204ENST00000559061 ZNF778Q96MU6 729 aa11.37□□□□□ -0.59
SNX1-204ENST00000559061 PPP1R2P1Q96PQ5 205 aa11.37□□□□□ -0.59
SNX1-204ENST00000559061 TRIM56Q9BRZ2 755 aaKnown RBP11.37□□□□□ -0.59
SNX1-204ENST00000559061 TRIM51Q9BSJ1 452 aa11.37□□□□□ -0.59
SNX1-204ENST00000559061 LRRC61Q9BV99 259 aa11.37□□□□□ -0.59
SNX1-204ENST00000559061 GPR63Q9BZJ6 419 aa11.37□□□□□ -0.59
SNX1-204ENST00000559061 CLPBQ9H078 707 aa11.37□□□□□ -0.59
SNX1-204ENST00000559061 FAM83DQ9H4H8 585 aa11.37□□□□□ -0.59
SNX1-204ENST00000559061 TRABDQ9H4I3 376 aa11.37□□□□□ -0.59
SNX1-204ENST00000559061 WDR26Q9H7D7 661 aa11.37□□□□□ -0.59
SNX1-204ENST00000559061 ARFGAP3Q9NP61 516 aa11.37□□□□□ -0.59
SNX1-204ENST00000559061 PKD2L2Q9NZM6 624 aa11.37□□□□□ -0.59
SNX1-204ENST00000559061 HACD3Q9P035 362 aa11.37□□□□□ -0.59
SNX1-204ENST00000559061 SLC2A6Q9UGQ3 507 aa11.37□□□□□ -0.59
SNX1-204ENST00000559061 FKBPLQ9UIM3 349 aa11.37□□□□□ -0.59
SNX1-204ENST00000559061 SLC17A4Q9Y2C5 497 aa11.37□□□□□ -0.59
SNX1-204ENST00000559061 PCDHGB2Q9Y5G2 931 aa11.37□□□□□ -0.59
SNX1-204ENST00000559061 U3KQA8 63 aa11.37□□□□□ -0.59
SNX1-204ENST00000559061 ERI2A8K979 691 aaKnown RBP11.36□□□□□ -0.59
SNX1-204ENST00000559061 TRIM38O00635 465 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 TOR1BO14657 336 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 INPP4BO15327 924 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 SH3BP5O60239 455 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 PRSS56P0CW18 603 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 DGKAP23743 735 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 NFKBIAP25963 317 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 MAGEA3P43357 314 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 GPR1P46091 355 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 TERF1P54274 439 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 CRADDP78560 199 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 BASP1P80723 227 aaKnown RBP11.36□□□□□ -0.59
SNX1-204ENST00000559061 ARHGAP8P85298 464 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 POU6F1Q14863 301 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 CHRNA6Q15825 494 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 ATP13A5Q4VNC0 1218 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 CCDC38Q502W7 563 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 RNASEH2BQ5TBB1 312 aaKnown RBP11.36□□□□□ -0.59
SNX1-204ENST00000559061 ENPP7Q6UWV6 458 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 XKR5Q6UX68 686 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 FAM151BQ6UXP7 276 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 GSTA5Q7RTV2 222 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 DCP2Q8IU60 420 aaKnown RBP11.36□□□□□ -0.59
SNX1-204ENST00000559061 SFTPA2Q8IWL1 248 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 KLHL7Q8IXQ5 586 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 PHACTR4Q8IZ21 702 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 MPP5Q8N3R9 675 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 TRAM1L1Q8N609 369 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 PNPLA1Q8N8W4 532 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 NAT8LQ8N9F0 302 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 ZNF548Q8NEK5 533 aaPredicted RBP11.36□□□□□ -0.59
SNX1-204ENST00000559061 OR4K2Q8NGD2 314 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 OR13J1Q8NGT2 312 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 CCL4L1Q8NHW4 92 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 BRSK1Q8TDC3 778 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 WDR92Q96MX6 357 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 PLEKHG4BQ96PX9 1271 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 WDR83Q9BRX9 315 aaKnown RBP11.36□□□□□ -0.59
SNX1-204ENST00000559061 DNAJC28Q9NX36 388 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.36□□□□□ -0.59
SNX1-204ENST00000559061 FEZ2Q9UHY8 353 aaPredicted RBP11.36□□□□□ -0.59
SNX1-204ENST00000559061 PCOLCE2Q9UKZ9 415 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 TMEM98Q9Y2Y6 226 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 PLEKHM1Q9Y4G2 1056 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 DGKBQ9Y6T7 804 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 SPTBN4Q9H254 2564 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 PCNX2A6NKB5 2137 aa11.36□□□□□ -0.59
SNX1-204ENST00000559061 GOLGA6L10A0A0M3HER8 536 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 PRSS38A1L453 326 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 CCDC78A2IDD5 438 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 GOLGA6CA6NDK9 693 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 GOLGA6BA6NDN3 693 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 AGAP14A8MT82 685 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 TTI1O43156 1089 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 PSMD3O43242 534 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 UGT1A9O60656 530 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 MAGEC1O60732 1142 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 DNAJC6O75061 913 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 AVILO75366 819 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 MTX2O75431 263 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 ECEL1O95672 775 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 GOLGA6DP0CG33 693 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 JUNDP17535 347 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 UGT1A6P19224 532 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 LPOP22079 712 aaPredicted RBP11.35□□□□□ -0.59
SNX1-204ENST00000559061 UGT1A1P22309 533 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 UGT1A4P22310 534 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 UGT1A3P35503 534 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 UGT1A5P35504 534 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 CDKN1CP49918 316 aaPredicted RBP11.35□□□□□ -0.59
SNX1-204ENST00000559061 HK3P52790 923 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 SRP54P61011 504 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms