RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 SCML4Q8N228 414 aa5.06□□□□□ -1.6
HMG20A-204ENST00000558288 RYBPQ8N488 228 aaPredicted RBP5.06□□□□□ -1.6
HMG20A-204ENST00000558288 TMEM151AQ8N4L1 468 aa5.06□□□□□ -1.6
HMG20A-204ENST00000558288 POC5Q8NA72 575 aa5.06□□□□□ -1.6
HMG20A-204ENST00000558288 SMG8Q8ND04 991 aaKnown RBP5.06□□□□□ -1.6
HMG20A-204ENST00000558288 ZNF555Q8NEP9 628 aa5.06□□□□□ -1.6
HMG20A-204ENST00000558288 MAFAQ8NHW3 353 aaPredicted RBP5.06□□□□□ -1.6
HMG20A-204ENST00000558288 OSCP1Q8WVF1 389 aa5.06□□□□□ -1.6
HMG20A-204ENST00000558288 GAS2L1Q99501 681 aaPredicted RBP5.06□□□□□ -1.6
HMG20A-204ENST00000558288 PSD2Q9BQI7 771 aa5.06□□□□□ -1.6
HMG20A-204ENST00000558288 LPIN3Q9BQK8 851 aa5.06□□□□□ -1.6
HMG20A-204ENST00000558288 YTHDF1Q9BYJ9 559 aaKnown RBP5.06□□□□□ -1.6
HMG20A-204ENST00000558288 RNF38Q9H0F5 515 aa5.06□□□□□ -1.6
HMG20A-204ENST00000558288 CDHR5Q9HBB8 845 aa5.06□□□□□ -1.6
HMG20A-204ENST00000558288 PTPRHQ9HD43 1115 aa5.06□□□□□ -1.6
HMG20A-204ENST00000558288 HACD3Q9P035 362 aa5.06□□□□□ -1.6
HMG20A-204ENST00000558288 ACTR3BQ9P1U1 418 aa5.06□□□□□ -1.6
HMG20A-204ENST00000558288 SARDHQ9UL12 918 aa5.06□□□□□ -1.6
HMG20A-204ENST00000558288 PCDHGA3Q9Y5H0 932 aa5.06□□□□□ -1.6
HMG20A-204ENST00000558288 MAGED1Q9Y5V3 778 aaPredicted RBP5.06□□□□□ -1.6
HMG20A-204ENST00000558288 TRIP11Q15643 1979 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 TRIM64A6NGJ6 449 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 H0Y858 1186 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 EEF2KO00418 725 aaKnown RBP5.05□□□□□ -1.6
HMG20A-204ENST00000558288 GNGT2O14610 69 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 B4GALT4O60513 344 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 GUCY1B2O75343 617 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 DAB1O75553 588 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 MFN2O95140 757 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 GPIP06744 558 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 PFKMP08237 780 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 THRBP10828 461 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 TGM1P22735 817 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 BDNFP23560 247 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 MZF1P28698 734 aaPredicted RBP5.05□□□□□ -1.6
HMG20A-204ENST00000558288 LEPRP48357 1165 aaKnown RBP5.05□□□□□ -1.6
HMG20A-204ENST00000558288 BCAT1P54687 386 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 CDH13P55290 713 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 CCL23P55773 120 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 MRPS15P82914 257 aaKnown RBP5.05□□□□□ -1.6
HMG20A-204ENST00000558288 AMHR2Q16671 573 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 C9orf50Q5SZB4 431 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 XAF1Q6GPH4 301 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 PRMT9Q6P2P2 845 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 CATSPERGQ6ZRH7 1159 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 KIAA0408Q6ZU52 694 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 OTOP2Q7RTS6 562 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 PAGE2Q7Z2X7 111 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 ARMC8Q8IUR7 673 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 MMAAQ8IVH4 418 aaKnown RBP5.05□□□□□ -1.6
HMG20A-204ENST00000558288 TBC1D21Q8IYX1 336 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 MIER2Q8N344 545 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 NDNFQ8TB73 568 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 RNF139Q8WU17 664 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 GTF3C2Q8WUA4 911 aaPredicted RBP5.05□□□□□ -1.6
HMG20A-204ENST00000558288 PTCD2Q8WV60 388 aaKnown RBP5.05□□□□□ -1.6
HMG20A-204ENST00000558288 CNDP2Q96KP4 475 aaKnown RBP5.05□□□□□ -1.6
HMG20A-204ENST00000558288 ZNF641Q96N77 438 aaPredicted RBP5.05□□□□□ -1.6
HMG20A-204ENST00000558288 HOPXQ9BPY8 73 aaPredicted RBP5.05□□□□□ -1.6
HMG20A-204ENST00000558288 MRPL57Q9BQC6 102 aaKnown RBP5.05□□□□□ -1.6
HMG20A-204ENST00000558288 CHID1Q9BWS9 393 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 MIR1-1HGQ9H1L0 117 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 ALG2Q9H553 416 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 EPS8L2Q9H6S3 715 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 MEAF6Q9HAF1 191 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 EXD2Q9NVH0 621 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 CMTM6Q9NX76 183 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 NSMCE4AQ9NXX6 385 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 MAP3K20Q9NYL2 800 aaKnown RBP5.05□□□□□ -1.6
HMG20A-204ENST00000558288 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.05□□□□□ -1.6
HMG20A-204ENST00000558288 DKK3Q9UBP4 350 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 GJD2Q9UKL4 321 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 PNMA8BQ9ULN7 279 aaPredicted RBP5.05□□□□□ -1.6
HMG20A-204ENST00000558288 PDE10AQ9Y233 779 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 SLC45A1Q9Y2W3 748 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 PTGDR2Q9Y5Y4 395 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 ANKRD12Q6UB98 2062 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 ZSWIM8A7E2V4 1837 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 DOCK5Q9H7D0 1870 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 ILVBLA1L0T0 632 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 IDH3BO43837 385 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 NDUFS2O75306 463 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 CRCPO75575 148 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 IPO13O94829 963 aaKnown RBP5.05□□□□□ -1.6
HMG20A-204ENST00000558288 GSNP06396 782 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 C7P10643 843 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 BMP4P12644 408 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 NFKB1P19838 968 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 KCNA5P22460 613 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 PTPN3P26045 913 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 GSTM2P28161 218 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 STAT5BP51692 787 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 TAS2R39P59534 338 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 VBP1P61758 197 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 IL1RL1Q01638 556 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 SP2Q02086 613 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 LIPEQ05469 1076 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 PSMD5Q16401 504 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 UGP2Q16851 508 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 SOWAHAQ2M3V2 549 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms